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OQ676962.1__WHB31190.1__X__00025
Bact-VirOQ676962.1__WHB31190.1__X__00025
Identity
- Accession:
- OQ676962 ↗
- Kingdom:
- phage
Quality
73.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 182-225
Domain cluster:
rep: ON528720.1__URY10904.1__X__00002__D43-78
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7wq5A01 | 3.30.730.10 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain | 0.90 | 79.0 | 7.13e-01 | 95.5% | 81.0% |
| 1gccA00 | 3.30.730.10 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain | 0.89 | 78.0 | 6.83e-01 | 95.5% | 74.6% |
| 6mvtA03 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.78 | 46.0 | 2.76e-01 | 86.4% | 10.0% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.78 | 67.0 | 5.75e-01 | 97.7% | 70.0% |
| 2cxiA02 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.76 | 63.0 | 4.13e-01 | 97.7% | 84.3% |
| 4e4tA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.75 | 62.0 | 4.03e-01 | 95.5% | 81.7% |
| 2dt8A02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.74 | 64.0 | 4.59e-01 | 100.0% | 50.0% |
| 7xc2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 45.0 | 3.35e-01 | 95.5% | 25.5% |
| 3uoxB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.72 | 45.0 | 2.74e-01 | 70.5% | 9.5% |
| 6le1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 50.0 | 4.30e-01 | 72.7% | 100.0% |
| 1c9fA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.69 | 48.0 | 3.90e-01 | 75.0% | 42.5% |
| 3tcaA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 44.0 | 3.52e-01 | 75.0% | 42.2% |
| 5xbfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 48.0 | 4.01e-01 | 100.0% | 85.1% |
| 2mlbA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 40.0 | 3.33e-01 | 72.7% | 44.3% |
| 7ct1A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 40.0 | 3.30e-01 | 72.7% | 42.4% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.57 | 36.0 | 2.82e-01 | 86.4% | 24.8% |
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.56 | 44.0 | 3.30e-01 | 88.6% | 88.2% |
| 1se9A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 40.0 | 3.19e-01 | 81.8% | 42.6% |
| 2derA02 | 2.30.30.280 | Mainly Beta › Roll › SH3 type barrels. › Adenine nucleotide alpha hydrolases-like domains | 0.55 | 38.0 | 3.42e-01 | 77.3% | 91.3% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.55 | 40.0 | 3.19e-01 | 86.4% | 55.6% |
| 2peeB02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 36.0 | 2.67e-01 | 72.7% | 35.1% |
| 2al3A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 36.0 | 3.19e-01 | 72.7% | 46.1% |
| 6r9rA01 | 3.40.50.10640 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like | 0.53 | 45.0 | 2.90e-01 | 95.5% | 71.4% |
| 7o06C01 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.51 | 38.0 | 3.21e-01 | 90.9% | 96.7% |
| 1xb4B02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.05e-01 | 93.2% | 44.0% |
| 4mtdA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.51 | 38.0 | 3.51e-01 | 88.6% | 92.1% |
| 1h0zA00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.50 | 42.0 | 3.72e-01 | 100.0% | 79.4% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 38.0 | 2.84e-01 | 100.0% | 30.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3813458 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.92 | 84.0 | 7.99e-01 | 97.7% | 94.0% |
| 3425673 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.92 | 74.0 | 7.07e-01 | 86.4% | 84.0% |
| 3661849 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.89 | 78.0 | 6.84e-01 | 95.5% | 71.4% |
| 3380188 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.88 | 77.0 | 7.11e-01 | 95.5% | 83.6% |
| 3671921 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.88 | 77.0 | 7.11e-01 | 95.5% | 81.8% |
| 3936410 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.79 | 63.0 | 4.04e-01 | 100.0% | 19.6% |
| 3456246 | 330.1.1.19 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_2 | 0.78 | 69.0 | 5.40e-01 | 97.7% | 68.9% |
| 86702 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.78 | 66.0 | 6.33e-01 | 97.7% | 88.5% |
| 3974688 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.74 | 63.0 | 6.08e-01 | 97.7% | 92.0% |
| 3882796 | 1021.1.1.2 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD | 0.72 | 61.0 | 4.91e-01 | 100.0% | 49.4% |
| 4119221 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.71 | 53.0 | 4.67e-01 | 81.8% | 100.0% |
| 4425756 | 101.1.2.764 ↗ | alpha arrays › HTH › HTH › winged helix domain › RP-C | 0.68 | 44.0 | 3.02e-01 | 93.2% | 20.0% |
| 3629559 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.62 | 52.0 | 4.30e-01 | 95.5% | 96.2% |
| 3502554 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.61 | 40.0 | 3.61e-01 | 70.5% | 44.6% |
| 3360324 | 2485.1.1.12 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC | 0.58 | 44.0 | 3.34e-01 | 90.9% | 86.9% |
| 3509327 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.57 | 48.0 | 2.82e-01 | 97.7% | 49.2% |
| 4770355 | 210.1.2.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Penicil_amidase | 0.57 | 47.0 | 3.22e-01 | 93.2% | 70.2% |
| 3374702 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.53 | 39.0 | 3.51e-01 | 86.4% | 62.9% |
| 4946074 | 4961.1.1.1 ↗ | a+b complex topology › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › RNA_pol_Rpb2_4 | 0.52 | 39.0 | 3.14e-01 | 86.4% | 59.0% |
D2
medium
residues 1-47
D3
medium
residues 51-111
Domain cluster:
rep: MG592470.1__AUR87191.1__NVP1097O_45__00045__D31-80
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 43.0 | 3.35e-01 | 72.1% | 78.1% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.62 | 43.0 | 4.01e-01 | 73.8% | 72.5% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.60 | 45.0 | 4.62e-01 | 82.0% | 93.0% |
| 3rv0B03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 43.0 | 4.07e-01 | 93.4% | 62.0% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.59 | 41.0 | 2.82e-01 | 73.8% | 87.9% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 46.0 | 3.66e-01 | 88.5% | 54.8% |
| 3fogA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 39.0 | 3.29e-01 | 93.4% | 41.2% |
| 4o32C00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 44.0 | 3.87e-01 | 83.6% | 100.0% |
| 3emxA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 39.0 | 3.21e-01 | 72.1% | 93.5% |
| 3mixA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.56 | 43.0 | 3.50e-01 | 83.6% | 81.7% |
| 2l6cA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 38.0 | 3.29e-01 | 72.1% | 98.1% |
| 3mydA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.56 | 41.0 | 3.23e-01 | 82.0% | 95.8% |
| 2pptA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 42.0 | 3.54e-01 | 82.0% | 100.0% |
| 3hr8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.54 | 37.0 | 3.55e-01 | 77.0% | 58.7% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 39.0 | 3.15e-01 | 80.3% | 54.9% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.54 | 36.0 | 3.59e-01 | 70.5% | 75.4% |
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.53 | 45.0 | 3.67e-01 | 96.7% | 58.8% |
| 4hb9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 2.70e-01 | 96.7% | 93.3% |
| 5x1yA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 34.0 | 2.77e-01 | 70.5% | 96.7% |
| 3sk1C01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 30.0 | 3.17e-01 | 85.2% | 64.8% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3839435 | 330.9.1.0 ↗ | a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p | 0.74 | 50.0 | 4.70e-01 | 70.5% | 72.0% |
| 3979087 | 4100.1.1.7 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › PF27115 | 0.68 | 48.0 | 4.60e-01 | 86.9% | 64.3% |
| 5049881 | 101.1.2.222 ↗ | alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N | 0.62 | 36.0 | 3.07e-01 | 82.0% | 36.0% |
| 4494953 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.60 | 48.0 | 3.92e-01 | 95.1% | 64.6% |
| 385833 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 40.0 | 3.38e-01 | 95.1% | 40.6% |
| 2591579 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.60 | 43.0 | 3.62e-01 | 77.0% | 87.6% |
| 4140586 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.59 | 46.0 | 3.74e-01 | 95.1% | 69.3% |
| 4449682 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.58 | 46.0 | 3.99e-01 | 91.8% | 99.0% |
| 4613074 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.58 | 45.0 | 3.72e-01 | 91.8% | 75.4% |
| 4084978 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.57 | 45.0 | 3.77e-01 | 96.7% | 64.6% |
| 3982542 | 3512.1.1.2 ↗ | beta duplicates or obligate multimers › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › YadA_stalk | 0.57 | 39.0 | 3.63e-01 | 73.8% | 57.3% |
| 4504072 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.57 | 44.0 | 3.68e-01 | 93.4% | 76.8% |
| 3512674 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.57 | 47.0 | 3.73e-01 | 95.1% | 60.0% |
| 3849004 | 101.1.1.273 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26094 | 0.56 | 46.0 | 3.75e-01 | 98.4% | 62.3% |
| 4949409 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 3.52e-01 | 91.8% | 74.8% |
| 4669381 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.55 | 36.0 | 3.12e-01 | 80.3% | 42.0% |
| 5008906 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 40.0 | 3.16e-01 | 80.3% | 51.0% |
| 3177024 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 40.0 | 3.41e-01 | 82.0% | 62.7% |
| 3418933 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.54 | 40.0 | 2.89e-01 | 83.6% | 86.8% |
| 5083918 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 39.0 | 3.16e-01 | 80.3% | 38.5% |
| 5044949 | 241.9.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like | 0.53 | 40.0 | 3.32e-01 | 85.2% | 69.2% |
| 5038348 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.52 | 38.0 | 3.05e-01 | 80.3% | 52.9% |
| 3332915 | 109.4.1.1531 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF7812 | 0.52 | 44.0 | 3.09e-01 | 100.0% | 93.3% |
| 3474420 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.52 | 45.0 | 3.44e-01 | 100.0% | 59.3% |
| 1117622 | 330.1.1.7 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsRBD2 | 0.52 | 42.0 | 3.61e-01 | 91.8% | 55.4% |
| 4675036 | 2485.1.1.6 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP | 0.52 | 41.0 | 3.62e-01 | 93.4% | 98.0% |
| 4399684 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.51 | 38.0 | 3.28e-01 | 83.6% | 90.5% |
| 5060431 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.51 | 38.0 | 2.41e-01 | 85.2% | 13.7% |
| 5014493 | 331.3.1.12 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like | 0.50 | 36.0 | 2.53e-01 | 80.3% | 34.8% |
| 4027679 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.50 | 36.0 | 3.14e-01 | 80.3% | 46.7% |
D4
medium
residues 114-176
Domain cluster:
rep: MW960032.1__QWY83295.1__X__00089__D170-241
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qnaA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.69 | 47.0 | 4.17e-01 | 71.4% | 95.7% |
| 3igmA00 | 1.20.5.2050 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.65 | 39.0 | 4.19e-01 | 92.1% | 69.6% |
| 1wp0A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 46.0 | 3.42e-01 | 81.0% | 96.2% |
| 1z6nA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 44.0 | 3.28e-01 | 77.8% | 93.4% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 42.0 | 3.68e-01 | 77.8% | 93.3% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.58 | 44.0 | 4.53e-01 | 84.1% | 96.5% |
| 2b7jB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 44.0 | 3.29e-01 | 82.5% | 92.8% |
| 4hwtA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.56 | 39.0 | 3.38e-01 | 74.6% | 89.1% |
| 1a5aB02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 39.0 | 2.71e-01 | 88.9% | 21.0% |
| 2x8nA01 | 3.30.2020.40 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 | 0.56 | 40.0 | 3.56e-01 | 79.4% | 74.2% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.55 | 39.0 | 3.55e-01 | 76.2% | 95.6% |
| 1p6vA00 | 2.40.280.10 | Mainly Beta › Beta Barrel › Small Protein B; Chain: A; › Small protein B | 0.54 | 37.0 | 2.97e-01 | 71.4% | 64.8% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 35.0 | 3.82e-01 | 74.6% | 89.8% |
| 5xyig01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.80e-01 | 96.8% | 42.3% |
| 3qz4A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 41.0 | 2.72e-01 | 93.7% | 51.3% |
| 4mdcD01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 37.0 | 3.16e-01 | 79.4% | 65.5% |
| 3pijA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 40.0 | 2.52e-01 | 92.1% | 58.3% |
| 1wmhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 38.0 | 3.54e-01 | 84.1% | 78.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5009316 | 11.1.1.1439 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29294 | 0.59 | 44.0 | 3.08e-01 | 79.4% | 79.5% |
| 4022408 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.59 | 48.0 | 3.02e-01 | 93.7% | 60.8% |
| 3229685 | 5.1.4.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD | 0.59 | 44.0 | 2.90e-01 | 84.1% | 67.2% |
| 4030100 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.57 | 44.0 | 4.48e-01 | 84.1% | 98.3% |
| 3500298 | 2485.1.1.87 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › UBX7_N | 0.56 | 45.0 | 3.79e-01 | 95.2% | 99.2% |
| 4480745 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 42.0 | 3.89e-01 | 84.1% | 81.0% |
| 1179510 | 719.2.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › DUF2442 | 0.55 | 42.0 | 3.82e-01 | 85.7% | 97.7% |
| 3958672 | 2485.1.1.56 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rng_hyd_C | 0.55 | 37.0 | 3.70e-01 | 74.6% | 90.0% |
| 4354203 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.54 | 44.0 | 3.96e-01 | 92.1% | 92.2% |
| 4179161 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 36.0 | 3.52e-01 | 73.0% | 98.7% |
| 3349069 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.53 | 39.0 | 2.63e-01 | 79.4% | 95.5% |
| 3383138 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 38.0 | 3.54e-01 | 87.3% | 62.8% |
| 4940664 | 9.16.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 | 0.51 | 35.0 | 3.24e-01 | 96.8% | 54.1% |
| 5022781 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 40.0 | 2.55e-01 | 88.9% | 27.5% |
| 4023242 | 220.1.1.187 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VPS13_C | 0.50 | 40.0 | 3.33e-01 | 93.7% | 80.8% |