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OQ680478.1__WGG14291.1__X__00137
Bact-VirOQ680478.1__WGG14291.1__X__00137
Identity
- Accession:
- OQ680478 ↗
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Taxonomy
TaxID: 3038307
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-72
Domain cluster:
rep: IMGVR_UViG_3300028677_000685-3300028677-Ga0255346_10043513__D4-87
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gjwC01 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 45.0 | 3.67e-01 | 100.0% | 40.0% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.60 | 51.0 | 4.58e-01 | 94.4% | 98.0% |
| 2g0qA01 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.58 | 49.0 | 4.18e-01 | 94.4% | 87.0% |
| 1v72A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 47.0 | 4.21e-01 | 91.5% | 63.4% |
| 3eucA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 45.0 | 3.39e-01 | 94.4% | 91.3% |
| 1jg5A00 | 3.30.1410.10 | Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP | 0.56 | 50.0 | 4.76e-01 | 100.0% | 88.0% |
| 3vsvA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 45.0 | 3.73e-01 | 88.7% | 92.2% |
| 4anjA06 | 1.20.5.4820 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 42.0 | 3.68e-01 | 85.9% | 61.1% |
| 3gv5B01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 44.0 | 3.68e-01 | 94.4% | 97.7% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.54 | 41.0 | 3.67e-01 | 88.7% | 56.5% |
| 2e9xB01 | 3.40.5.50 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.52 | 37.0 | 3.85e-01 | 93.0% | 81.8% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 31.0 | 3.32e-01 | 93.0% | 69.5% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 38.0 | 3.16e-01 | 78.9% | 66.7% |
| 1darA05 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 4.01e-01 | 94.4% | 79.3% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 3.84e-01 | 93.0% | 85.9% |
| 4jz6A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 39.0 | 2.74e-01 | 85.9% | 53.8% |
| 2pq0A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.51 | 39.0 | 3.52e-01 | 84.5% | 84.0% |
| 5oomK00 | 3.90.1180.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 | 0.50 | 39.0 | 3.05e-01 | 88.7% | 75.7% |
| 1vioA03 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.50 | 40.0 | 3.93e-01 | 93.0% | 89.0% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.50 | 40.0 | 3.76e-01 | 88.7% | 85.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4956777 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.76 | 68.0 | 6.60e-01 | 100.0% | 95.0% |
| 4934658 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.58 | 50.0 | 5.08e-01 | 95.8% | 98.6% |
| 119083 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.58 | 47.0 | 4.33e-01 | 91.5% | 68.8% |
| 3275667 | 5.1.5.76 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_NOL10_N | 0.57 | 34.0 | 2.15e-01 | 74.6% | 10.1% |
| 4058861 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.56 | 45.0 | 4.73e-01 | 93.0% | 96.9% |
| 3077668 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.55 | 45.0 | 3.96e-01 | 93.0% | 79.8% |
| 5010981 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 40.0 | 4.39e-01 | 90.1% | 100.0% |
| 5059446 | 241.7.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N | 0.54 | 43.0 | 3.94e-01 | 94.4% | 64.0% |
| 4015771 | 210.1.4.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › (Glycosyl)asparaginase | 0.53 | 38.0 | 2.58e-01 | 80.3% | 97.9% |
| 3590646 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.51 | 37.0 | 3.17e-01 | 77.5% | 74.4% |
| 4270467 | 2002.1.1.45 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd | 0.51 | 43.0 | 2.84e-01 | 100.0% | 37.0% |
| 4381495 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.51 | 41.0 | 3.84e-01 | 90.1% | 86.7% |
| 3912224 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.50 | 42.0 | 2.81e-01 | 100.0% | 35.3% |
| 1681452 | 3996.1.1.1 ↗ | alpha complex topology › Vesicular stomatitis virus L polymerase C-terminal domain › Vesicular stomatitis virus L polymerase C-terminal domain › Vesicular stomatitis virus L polymerase C-terminal domain › Methyltrans_Mon_3rd | 0.50 | 35.0 | 2.59e-01 | 74.6% | 56.7% |
| 4024871 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.50 | 37.0 | 3.87e-01 | 88.7% | 87.7% |