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OQ680630.1__WGL39722.1__PG288_42__00041
Bact-VirOQ680630.1__WGL39722.1__PG288_42__00041
Identity
- Accession:
- OQ680630 ↗
- Kingdom:
- phage
Quality
64.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 64-125
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o3fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 52.0 | 4.78e-01 | 100.0% | 54.9% |
| 3iwfB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 50.0 | 4.44e-01 | 100.0% | 51.7% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 48.0 | 4.66e-01 | 100.0% | 68.1% |
| 1lvaA04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 47.0 | 4.80e-01 | 100.0% | 78.3% |
| 4dveA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.60 | 51.0 | 3.72e-01 | 100.0% | 85.7% |
| 2y1hB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 46.0 | 3.05e-01 | 83.9% | 34.3% |
| 2b6cA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.60 | 44.0 | 3.79e-01 | 79.0% | 80.4% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 40.0 | 4.37e-01 | 98.4% | 95.7% |
| 1j6oA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 44.0 | 2.97e-01 | 83.9% | 36.9% |
| 4ewcA03 | 1.20.120.1660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 40.0 | 3.81e-01 | 74.2% | 92.0% |
| 1neqA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 45.0 | 4.31e-01 | 88.7% | 81.1% |
| 1qb2A00 | 1.10.260.30 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain | 0.57 | 46.0 | 3.99e-01 | 100.0% | 54.7% |
| 5h3hB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 47.0 | 3.19e-01 | 100.0% | 60.6% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 43.0 | 3.73e-01 | 82.3% | 75.3% |
| 2ld5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 43.0 | 4.22e-01 | 100.0% | 79.1% |
| 1br2A03 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.56 | 40.0 | 3.60e-01 | 79.0% | 52.6% |
| 7z7vE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.56 | 38.0 | 3.91e-01 | 93.5% | 75.0% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 47.0 | 4.64e-01 | 100.0% | 98.5% |
| 6b9sB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 41.0 | 3.97e-01 | 83.9% | 95.9% |
| 2kt0A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 38.0 | 4.11e-01 | 98.4% | 100.0% |
| 1o4xA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 40.0 | 4.17e-01 | 98.4% | 94.4% |
| 2mgqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 46.0 | 4.51e-01 | 100.0% | 89.7% |
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 40.0 | 3.81e-01 | 100.0% | 68.4% |
| 1te2A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 40.0 | 3.92e-01 | 96.8% | 75.0% |
| 1b72A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 39.0 | 3.90e-01 | 100.0% | 76.5% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.53 | 40.0 | 3.64e-01 | 83.9% | 66.3% |
| 3cz1A00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.53 | 38.0 | 3.12e-01 | 90.3% | 39.3% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.53 | 46.0 | 4.32e-01 | 100.0% | 87.3% |
| 2awiA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.53 | 42.0 | 4.13e-01 | 90.3% | 86.6% |
| 1e3oC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 36.0 | 3.85e-01 | 98.4% | 97.9% |
| 1ccdA00 | 1.10.210.10 | Mainly Alpha › Orthogonal Bundle › Uteroglobin › Secretoglobin | 0.52 | 36.0 | 3.46e-01 | 77.4% | 58.4% |
| 1lkxC03 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.51 | 40.0 | 3.39e-01 | 85.5% | 70.1% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970811 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 51.0 | 4.63e-01 | 100.0% | 52.9% |
| 3986364 | 101.1.1.11 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 | 0.73 | 50.0 | 4.48e-01 | 100.0% | 50.0% |
| 3979850 | 101.1.1.11 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 | 0.72 | 50.0 | 4.52e-01 | 100.0% | 52.9% |
| 3984771 | 101.1.1.11 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 | 0.72 | 49.0 | 3.97e-01 | 100.0% | 36.0% |
| 5076076 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.70 | 52.0 | 4.28e-01 | 100.0% | 42.5% |
| 4794011 | 210.1.2.7 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › NAAA-beta | 0.63 | 45.0 | 3.83e-01 | 77.4% | 46.1% |
| 4941656 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 49.0 | 4.60e-01 | 100.0% | 68.8% |
| 3629059 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.62 | 45.0 | 4.14e-01 | 79.0% | 69.4% |
| 3236431 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 51.0 | 4.97e-01 | 91.9% | 85.7% |
| 4068007 | 101.1.2.233 ↗ | alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH | 0.61 | 46.0 | 4.51e-01 | 100.0% | 72.9% |
| 3507798 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.61 | 48.0 | 4.81e-01 | 95.2% | 86.2% |
| 3654648 | 103.9.1.0 ↗ | alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain | 0.60 | 41.0 | 3.98e-01 | 71.0% | 100.0% |
| 3236318 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.60 | 43.0 | 3.95e-01 | 77.4% | 75.3% |
| 3684426 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.60 | 46.0 | 4.58e-01 | 85.5% | 98.5% |
| 3935738 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 41.0 | 4.17e-01 | 96.8% | 81.7% |
| 4232456 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.56 | 49.0 | 4.16e-01 | 98.4% | 77.1% |
| 3308083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 45.0 | 3.88e-01 | 100.0% | 55.2% |
| 3217489 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.55 | 39.0 | 4.18e-01 | 100.0% | 98.0% |
| 3301164 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.55 | 40.0 | 4.10e-01 | 98.4% | 85.0% |
| 4404513 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.55 | 39.0 | 3.76e-01 | 96.8% | 65.3% |
| 5071274 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 45.0 | 4.05e-01 | 98.4% | 85.3% |
| 3584637 | 7579.1.1.21 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Ndr | 0.54 | 43.0 | 3.04e-01 | 91.9% | 41.8% |
| 137986 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.54 | 40.0 | 3.73e-01 | 100.0% | 63.1% |
| 3495504 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 39.0 | 4.13e-01 | 98.4% | 100.0% |
| 3903736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 37.0 | 3.67e-01 | 98.4% | 68.6% |
| 3828246 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.52 | 45.0 | 3.81e-01 | 98.4% | 71.8% |
| 3230818 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.52 | 40.0 | 3.87e-01 | 87.1% | 82.7% |
| 3347271 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.52 | 46.0 | 3.47e-01 | 100.0% | 51.0% |
| 3409828 | 108.2.1.1 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › PBP_GOBP | 0.52 | 42.0 | 3.50e-01 | 100.0% | 97.7% |
| 3546822 | 110.1.1.17 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CC4_RECK | 0.51 | 39.0 | 3.91e-01 | 95.2% | 81.5% |
| 5070173 | 3697.1.1.1 ↗ | alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx | 0.51 | 41.0 | 3.88e-01 | 95.2% | 81.2% |
| 3832053 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.51 | 43.0 | 3.57e-01 | 100.0% | 83.3% |
| 3219208 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.50 | 41.0 | 3.96e-01 | 100.0% | 85.3% |
| 3617983 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 40.0 | 2.50e-01 | 90.3% | 96.8% |