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OQ689084.1__WIL01705.1__CLOJGIHB_00025__00025
Bact-VirOQ689084.1__WIL01705.1__CLOJGIHB_00025__00025
Identity
- Accession:
- OQ689084 ↗
- Kingdom:
- phage
Quality
63.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Drulisvirus›
Klebsiella_phage_vB_KpnA_SCNJ1-Z
TaxID: 3038275
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-67
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.73 | 49.0 | 4.84e-01 | 70.2% | 91.8% |
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.72 | 61.0 | 5.66e-01 | 97.9% | 77.0% |
| 4gr5C01 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.72 | 60.0 | 5.48e-01 | 97.9% | 70.3% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.71 | 57.0 | 5.26e-01 | 97.9% | 68.2% |
| 4ecnA02 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.63 | 46.0 | 3.39e-01 | 78.7% | 50.8% |
| 5bjuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 46.0 | 2.86e-01 | 87.2% | 24.9% |
| 4tpuA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.59 | 43.0 | 4.77e-01 | 87.2% | 100.0% |
| 3nkqA03 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.59 | 44.0 | 2.66e-01 | 85.1% | 45.6% |
| 5e4eC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 41.0 | 3.32e-01 | 76.6% | 46.5% |
| 4dipH00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.58 | 39.0 | 2.99e-01 | 70.2% | 68.9% |
| 2yuxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 3.44e-01 | 87.2% | 47.2% |
| 4jysB00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.57 | 38.0 | 2.97e-01 | 70.2% | 67.5% |
| 5ujeA01 | 3.30.1760.10 | Alpha Beta › 2-Layer Sandwich › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 | 0.57 | 41.0 | 3.27e-01 | 78.7% | 98.2% |
| 4fmrB01 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.56 | 41.0 | 3.05e-01 | 85.1% | 41.6% |
| 3zo9B03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 41.0 | 3.32e-01 | 80.9% | 42.1% |
| 3bpnC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 39.0 | 3.24e-01 | 78.7% | 61.4% |
| 5jeaD00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.56 | 45.0 | 2.94e-01 | 93.6% | 27.7% |
| 2conA00 | 6.20.210.10 | Special › Other non-globular › Herpes Virus-1 › Nin one binding (NOB1), Zn-ribbon-like | 0.54 | 45.0 | 3.92e-01 | 100.0% | 62.0% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.54 | 40.0 | 3.72e-01 | 91.5% | 66.2% |
| 1ceeB00 | 3.90.810.10 | Alpha Beta › Alpha-Beta Complex › SerineThreonine-protein kinase PAK-alpha; Chain A › CRIB domain | 0.54 | 36.0 | 3.40e-01 | 100.0% | 54.2% |
| 2ofqA01 | 2.60.40.2500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 37.0 | 3.16e-01 | 80.9% | 48.3% |
| 2o6cA00 | 2.60.40.2480 | Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type | 0.52 | 37.0 | 2.76e-01 | 85.1% | 47.5% |
| 6ks6G02 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.51 | 38.0 | 3.13e-01 | 89.4% | 56.7% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4953501 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 56.0 | 6.04e-01 | 70.2% | 100.0% |
| 4993851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 48.0 | 4.92e-01 | 70.2% | 100.0% |
| 3593793 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.70 | 47.0 | 4.61e-01 | 91.5% | 66.0% |
| 5030079 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.67 | 50.0 | 2.86e-01 | 80.9% | 34.1% |
| 4980022 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 52.0 | 5.10e-01 | 85.1% | 84.0% |
| 2172423 | 3529.1.1.4 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault_4 | 0.65 | 43.0 | 4.30e-01 | 85.1% | 66.0% |
| 4941232 | 375.1.1.204 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central | 0.63 | 46.0 | 3.38e-01 | 76.6% | 49.6% |
| 3629655 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.62 | 44.0 | 3.13e-01 | 74.5% | 70.3% |
| 3907976 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.62 | 38.0 | 3.89e-01 | 97.9% | 60.0% |
| 344966 | 6047.1.1.1 ↗ | beta barrels › N-terminal domain in DUF2118 family › N-terminal domain in DUF2118 family › N-terminal domain in DUF2118 family › DUF2118 | 0.60 | 50.0 | 4.27e-01 | 100.0% | 81.7% |
| 5036017 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.59 | 42.0 | 2.66e-01 | 74.5% | 47.4% |
| 4987796 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 42.0 | 4.72e-01 | 78.7% | 100.0% |
| 3566057 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.59 | 45.0 | 3.91e-01 | 100.0% | 52.5% |
| 4001826 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 42.0 | 3.62e-01 | 80.9% | 64.7% |
| 4931152 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 42.0 | 4.67e-01 | 87.2% | 100.0% |
| 4944445 | 3769.1.1.0 ↗ | 0.58 | 42.0 | 4.23e-01 | 89.4% | 86.7% | |
| 4329922 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.58 | 44.0 | 2.88e-01 | 87.2% | 90.2% |
| 4960524 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 48.0 | 4.95e-01 | 93.6% | 100.0% |
| 3895252 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.58 | 45.0 | 3.04e-01 | 100.0% | 21.5% |
| 4937430 | 3769.1.1.0 ↗ | 0.58 | 43.0 | 4.35e-01 | 95.7% | 93.3% | |
| 5015962 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.58 | 48.0 | 4.75e-01 | 93.6% | 100.0% |
| 3865540 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.57 | 44.0 | 3.07e-01 | 100.0% | 24.0% |
| 3596753 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 46.0 | 4.54e-01 | 87.2% | 100.0% |
| 3780516 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.57 | 43.0 | 2.84e-01 | 100.0% | 17.9% |
| 5022503 | 2004.1.3.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.56 | 45.0 | 3.24e-01 | 95.7% | 52.3% |
| 3516802 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.55 | 40.0 | 4.17e-01 | 100.0% | 100.0% |
| 3518184 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.55 | 40.0 | 3.79e-01 | 91.5% | 65.0% |
| 4941311 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.55 | 42.0 | 3.36e-01 | 97.9% | 37.5% |
| 3502144 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.54 | 39.0 | 4.07e-01 | 97.9% | 100.0% |
| 3258939 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.54 | 39.0 | 2.61e-01 | 91.5% | 17.3% |
| 3867986 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.54 | 41.0 | 3.36e-01 | 100.0% | 42.0% |
| 5035483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.52 | 39.0 | 2.91e-01 | 97.9% | 28.2% |
| 3959055 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.51 | 37.0 | 3.49e-01 | 85.1% | 93.8% |
| 4961292 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.51 | 28.0 | 2.40e-01 | 70.2% | 33.3% |
| 3265575 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.50 | 38.0 | 3.28e-01 | 87.2% | 57.6% |
| 3259023 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.50 | 38.0 | 2.41e-01 | 85.1% | 20.0% |