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OQ689089.1__WHB31262.1__X__00051

Bact-Vir

OQ689089.1__WHB31262.1__X__00051

Identity

Accession:
OQ689089 ↗
Kingdom:
phage

Quality

73.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Obolenskvirus› Acinetobacter_phage_P1068

TaxID: 3038283

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-81
PDB
Domain cluster: rep: OL744215.1__UNA05327.1__X__00014__D4-52
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3i8nB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.56 39.0 2.92e-01 74.5% 28.6%
1y8qB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 45.0 2.99e-01 95.7% 42.3%
2d8bA01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.54 43.0 3.23e-01 95.7% 87.1%
4nocD00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 41.0 3.09e-01 91.5% 71.4%
3ddjA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.52 42.0 3.12e-01 97.9% 60.1%
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.52 38.0 2.50e-01 78.7% 47.5%
6nrzA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.52 37.0 2.36e-01 89.4% 30.1%
4cooA03 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.51 40.0 3.05e-01 97.9% 69.3%
1vr9A02 3.10.20.750 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.50 35.0 3.46e-01 80.9% 94.6%
2z5lA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 42.0 2.43e-01 95.7% 18.1%
4fajA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 35.0 2.42e-01 85.1% 21.1%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4930705 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.75 51.0 4.53e-01 70.2% 89.2%
4381486 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.65 50.0 4.11e-01 85.1% 45.5%
3921829 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 3.85e-01 72.3% 78.5%
3343337 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 40.0 3.30e-01 78.7% 37.6%
3237398 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.58 41.0 3.29e-01 76.6% 57.0%
3646829 282.1.1.0 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.57 40.0 3.85e-01 74.5% 74.5%
4622751 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 36.0 2.83e-01 80.9% 28.6%
3789891 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.56 42.0 2.98e-01 83.0% 37.5%
4966075 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.55 38.0 2.89e-01 76.6% 28.8%
1291695 206.1.1.11 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.54 43.0 2.69e-01 100.0% 66.6%
3513823 363.1.1.1 ↗ few secondary structure elements › Thyroglobulin type-1 domain › Thyroglobulin type-1 domain › Thyroglobulin type-1 domain › Thyroglobulin_1 0.54 44.0 3.69e-01 100.0% 51.8%
2037203 223.3.1.3 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.53 40.0 3.93e-01 85.1% 80.4%
1766108 223.3.1.3 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.53 40.0 3.54e-01 85.1% 61.4%
3299595 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.52 45.0 3.12e-01 100.0% 56.5%
4932156 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.52 35.0 3.16e-01 89.4% 50.8%
3783448 129.1.1.57 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_4 0.52 40.0 2.43e-01 100.0% 47.3%
4206032 3016.1.1.1 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.51 34.0 3.08e-01 95.7% 47.1%
4564454 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.51 35.0 2.71e-01 83.0% 33.3%
4109302 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.50 41.0 3.32e-01 95.7% 55.2%
3723582 282.1.1.0 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.50 40.0 2.83e-01 97.9% 55.4%