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OQ703261.1__WFG79320.1__JPGLOODI_00003__00003
Bact-VirOQ703261.1__WFG79320.1__JPGLOODI_00003__00003
Identity
- Accession:
- OQ703261 ↗
- Kingdom:
- phage
Quality
93.4
mean pLDDT
Taxonomy
TaxID: 3038264
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-59
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.84 | 70.0 | 6.67e-01 | 100.0% | 78.8% |
| 7xi5A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.83 | 68.0 | 7.10e-01 | 98.2% | 100.0% |
| 1y9qA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 68.0 | 5.91e-01 | 100.0% | 61.2% |
| 1au7A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 71.0 | 6.64e-01 | 100.0% | 87.5% |
| 1x57A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 66.0 | 5.65e-01 | 100.0% | 57.1% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 65.0 | 6.14e-01 | 100.0% | 74.3% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 65.0 | 6.31e-01 | 100.0% | 81.0% |
| 7zviA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 65.0 | 5.04e-01 | 100.0% | 43.4% |
| 3zhiA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 67.0 | 6.25e-01 | 100.0% | 83.6% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 61.0 | 5.71e-01 | 100.0% | 71.8% |
| 2k9qA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 48.0 | 5.31e-01 | 77.2% | 95.0% |
| 3fymA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 65.0 | 5.74e-01 | 100.0% | 70.7% |
| 3me5A01 | 1.10.260.140 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.72 | 58.0 | 5.65e-01 | 100.0% | 81.2% |
| 2l3nA00 | 1.10.1050.20 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S4 Delta 41; Chain A, domain 1 › | 0.70 | 43.0 | 3.52e-01 | 100.0% | 32.7% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 58.0 | 5.66e-01 | 100.0% | 84.6% |
| 2bnkA00 | 1.10.8.600 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phage phi29 replication organiser protein p16.7-like | 0.58 | 39.0 | 3.83e-01 | 98.2% | 64.1% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 43.0 | 3.90e-01 | 80.7% | 61.5% |
| 1gzsB00 | 1.10.4120.10 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain | 0.57 | 48.0 | 3.57e-01 | 100.0% | 69.7% |
| 3d5lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 36.0 | 3.92e-01 | 71.9% | 82.2% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 40.0 | 3.58e-01 | 77.2% | 98.8% |
| 1v1gA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 43.0 | 3.10e-01 | 91.2% | 26.6% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 40.0 | 4.20e-01 | 77.2% | 94.0% |
| 1wtyA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 45.0 | 3.79e-01 | 100.0% | 70.7% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 37.0 | 3.56e-01 | 73.7% | 95.9% |
| 2icgA00 | 3.40.1580.10 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like | 0.54 | 45.0 | 3.32e-01 | 98.2% | 33.3% |
| 5a2gA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 42.0 | 2.57e-01 | 100.0% | 44.3% |
| 2vixA02 | 1.10.150.630 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.53 | 43.0 | 3.75e-01 | 91.2% | 73.0% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.53 | 44.0 | 3.94e-01 | 100.0% | 65.2% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 41.0 | 4.15e-01 | 84.2% | 85.5% |
| 4ye6A01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.52 | 37.0 | 3.13e-01 | 78.9% | 74.0% |
| 6vddA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.51 | 38.0 | 3.16e-01 | 84.2% | 56.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3518133 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.82 | 74.0 | 6.44e-01 | 100.0% | 75.3% |
| 3281381 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.79 | 69.0 | 5.70e-01 | 100.0% | 67.6% |
| 3472710 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.79 | 70.0 | 5.55e-01 | 100.0% | 60.0% |
| 363971 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.79 | 70.0 | 6.11e-01 | 100.0% | 73.3% |
| 4008447 | 101.1.4.47 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1456 | 0.79 | 70.0 | 6.28e-01 | 100.0% | 77.5% |
| 4034164 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.78 | 68.0 | 5.30e-01 | 100.0% | 48.8% |
| 4014657 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 50.0 | 5.15e-01 | 70.2% | 69.1% |
| 2627770 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.77 | 68.0 | 6.44e-01 | 100.0% | 88.2% |
| 3617137 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 53.0 | 5.46e-01 | 75.4% | 74.5% |
| 3629477 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 53.0 | 5.25e-01 | 75.4% | 68.3% |
| 4031838 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.76 | 65.0 | 5.90e-01 | 98.2% | 71.2% |
| 1867991 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.76 | 66.0 | 5.94e-01 | 100.0% | 76.2% |
| 5012960 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.76 | 66.0 | 5.70e-01 | 100.0% | 65.6% |
| 3793542 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 52.0 | 5.14e-01 | 75.4% | 68.3% |
| 5079851 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 47.0 | 4.68e-01 | 71.9% | 61.7% |
| 3575777 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.74 | 51.0 | 5.43e-01 | 77.2% | 82.0% |
| 3730184 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.74 | 49.0 | 5.00e-01 | 70.2% | 70.9% |
| 4966173 | 101.1.4.97 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DrmE_C | 0.72 | 60.0 | 4.75e-01 | 96.5% | 48.8% |
| 3724068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 48.0 | 4.94e-01 | 77.2% | 74.5% |
| 3692546 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.70 | 46.0 | 4.87e-01 | 70.2% | 78.0% |
| 3687180 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 47.0 | 5.02e-01 | 75.4% | 82.0% |
| 4274627 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.68 | 46.0 | 4.56e-01 | 75.4% | 66.7% |
| 3910504 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 44.0 | 4.66e-01 | 75.4% | 76.0% |
| 4952808 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 44.0 | 4.55e-01 | 71.9% | 70.9% |
| 4958195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 45.0 | 4.64e-01 | 75.4% | 74.5% |
| 5070907 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 42.0 | 4.58e-01 | 73.7% | 84.4% |
| 4019525 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.63 | 45.0 | 4.46e-01 | 77.2% | 71.7% |
| 3469846 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.62 | 45.0 | 4.23e-01 | 77.2% | 78.6% |
| 3368926 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 38.0 | 3.71e-01 | 82.5% | 72.3% |
| 3923977 | 148.1.1.10 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TAFII28 | 0.52 | 33.0 | 3.15e-01 | 73.7% | 50.0% |
| 3263385 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.52 | 42.0 | 3.88e-01 | 96.5% | 69.3% |