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OQ703261.1__WFG79326.1__JPGLOODI_00009__00009
Bact-VirOQ703261.1__WFG79326.1__JPGLOODI_00009__00009
Identity
- Accession:
- OQ703261 ↗
- Kingdom:
- phage
Quality
79.6
mean pLDDT
Taxonomy
TaxID: 3038264
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-83
Domain cluster:
rep: LN681534.1__CEK40234.1__PHICD2401_20022__00023__D98-173
D2
high
residues 281-384
Domain cluster:
rep: MT234670.1__QIW88495.1__X__00062__D259-340
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00041.28 best | fn3 | 25.5 | 1.70e-05 | 76.0% | 81.0% |
D3
high
residues 494-598
Domain cluster:
rep: MW478291.1__QTZ82904.1__phiCPD_00022__00022__D410-498
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wmqA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.73 | 59.0 | 6.22e-01 | 100.0% | 94.7% |
| 2ccvA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 59.0 | 6.06e-01 | 99.0% | 99.0% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 42.0 | 4.72e-01 | 97.1% | 87.2% |
| 1w8oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 51.0 | 5.22e-01 | 98.1% | 86.3% |
| 3njcA00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.65 | 44.0 | 3.92e-01 | 70.5% | 80.4% |
| 2ylkA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.62 | 49.0 | 4.44e-01 | 97.1% | 61.4% |
| 1mpxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 55.0 | 4.30e-01 | 100.0% | 96.6% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 53.0 | 4.52e-01 | 100.0% | 96.7% |
| 4p02B01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 51.0 | 4.80e-01 | 99.0% | 97.7% |
| 1hx6B01 | 2.70.9.30 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Viral coat protein p3 | 0.58 | 51.0 | 4.03e-01 | 100.0% | 88.0% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 36.0 | 3.92e-01 | 80.0% | 74.4% |
| 4dkmA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.57 | 46.0 | 3.75e-01 | 89.5% | 58.7% |
| 3no8A00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.57 | 44.0 | 3.92e-01 | 97.1% | 56.7% |
| 2wqlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 45.0 | 4.00e-01 | 86.7% | 95.4% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 45.0 | 4.27e-01 | 89.5% | 80.6% |
| 4afhE00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.55 | 45.0 | 3.66e-01 | 91.4% | 93.4% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 45.0 | 4.04e-01 | 88.6% | 96.6% |
| 2dd7A00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.55 | 44.0 | 3.58e-01 | 89.5% | 58.4% |
| 2w8eA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.54 | 45.0 | 3.71e-01 | 94.3% | 67.5% |
| 3p51A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 44.0 | 3.93e-01 | 87.6% | 93.1% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 46.0 | 3.65e-01 | 98.1% | 74.9% |
| 3uebF00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.53 | 43.0 | 4.43e-01 | 87.6% | 94.0% |
| 5tipA02 | 2.70.9.20 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Major capsid protein Vp54 | 0.53 | 46.0 | 3.75e-01 | 100.0% | 87.0% |
| 3klxB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 41.0 | 3.44e-01 | 83.8% | 76.8% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 45.0 | 3.89e-01 | 97.1% | 98.8% |
| 2w07B01 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.52 | 45.0 | 4.41e-01 | 97.1% | 98.3% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.52 | 43.0 | 4.34e-01 | 100.0% | 94.1% |
| 2vo8A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 4.13e-01 | 96.2% | 84.4% |
| 6d6tA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.52 | 43.0 | 3.55e-01 | 95.2% | 87.1% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 4.11e-01 | 99.0% | 81.1% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.90e-01 | 94.3% | 95.0% |
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 4.06e-01 | 96.2% | 84.7% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 39.0 | 3.59e-01 | 83.8% | 91.5% |
| 6dw1A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.50 | 43.0 | 3.53e-01 | 98.1% | 64.8% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3604637 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.76 | 58.0 | 5.63e-01 | 99.0% | 73.0% |
| 1489395 | 4182.1.1.2 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin | 0.73 | 59.0 | 6.22e-01 | 100.0% | 94.7% |
| 3257125 | 4182.1.1.2 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin | 0.70 | 56.0 | 5.86e-01 | 99.0% | 93.7% |
| 1697323 | 4182.1.1.2 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin | 0.67 | 59.0 | 6.07e-01 | 99.0% | 98.0% |
| 3601703 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 59.0 | 4.98e-01 | 98.1% | 92.0% |
| 5036520 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.65 | 46.0 | 4.28e-01 | 100.0% | 59.2% |
| 3976897 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.65 | 57.0 | 5.34e-01 | 99.0% | 80.0% |
| 5043537 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.65 | 43.0 | 3.59e-01 | 99.0% | 39.4% |
| 4981531 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.62 | 48.0 | 4.46e-01 | 99.0% | 64.4% |
| 5061301 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.62 | 50.0 | 3.84e-01 | 100.0% | 37.9% |
| 3597119 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 56.0 | 4.46e-01 | 100.0% | 71.4% |
| 4957580 | 10.29.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in distal tail protein (Dit)-like proteins › Jelly-roll domain in distal tail protein (Dit)-like proteins | 0.61 | 53.0 | 4.92e-01 | 93.3% | 100.0% |
| 5039565 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.61 | 56.0 | 5.20e-01 | 100.0% | 94.6% |
| 3947769 | 10.32.1.10 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BcsB | 0.61 | 55.0 | 5.01e-01 | 100.0% | 93.6% |
| 3885839 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 4.67e-01 | 96.2% | 85.0% |
| 3499553 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.60 | 48.0 | 4.15e-01 | 99.0% | 56.2% |
| 3707025 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 53.0 | 4.66e-01 | 99.0% | 94.8% |
| 4321644 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.59 | 35.0 | 4.14e-01 | 100.0% | 87.1% |
| 4887083 | 872.1.1.2 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin | 0.59 | 37.0 | 4.21e-01 | 100.0% | 85.7% |
| 3762105 | 11.1.1.1118 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28312 | 0.57 | 45.0 | 4.20e-01 | 97.1% | 65.9% |
| 3701503 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.57 | 52.0 | 4.45e-01 | 100.0% | 70.3% |
| 4000172 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.57 | 45.0 | 4.38e-01 | 97.1% | 77.4% |
| 4098687 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 45.0 | 4.03e-01 | 86.7% | 87.1% |
| 327713 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.57 | 46.0 | 3.65e-01 | 89.5% | 56.4% |
| 5045252 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.56 | 46.0 | 4.70e-01 | 86.7% | 94.0% |
| 3541794 | 10.32.1.228 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SID-1_RNA_chan | 0.56 | 49.0 | 4.58e-01 | 98.1% | 93.3% |
| 3344805 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 46.0 | 3.77e-01 | 91.4% | 59.8% |
| 3262490 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 35.0 | 3.99e-01 | 92.4% | 88.0% |
| 5035611 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.56 | 38.0 | 3.31e-01 | 97.1% | 45.6% |
| 3231821 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 47.0 | 4.39e-01 | 97.1% | 95.6% |
| 3835133 | 304.112.1.2 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.54 | 43.0 | 3.59e-01 | 86.7% | 80.5% |
| 3541435 | 271.1.1.5 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › G2F | 0.54 | 44.0 | 3.44e-01 | 89.5% | 54.0% |
| 5039248 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 47.0 | 4.27e-01 | 100.0% | 96.0% |
| 4940593 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 47.0 | 4.04e-01 | 98.1% | 80.0% |
| 1720440 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.53 | 46.0 | 3.61e-01 | 97.1% | 76.8% |
| 3175500 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.53 | 46.0 | 3.37e-01 | 100.0% | 79.4% |
| 3926092 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.53 | 43.0 | 3.73e-01 | 88.6% | 66.1% |
| 3822349 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.53 | 44.0 | 3.42e-01 | 90.5% | 84.3% |
| 3972051 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 4.12e-01 | 90.5% | 73.8% |
| 3569001 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.52 | 43.0 | 3.64e-01 | 93.3% | 89.5% |
| 3222273 | 11.12.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like | 0.52 | 45.0 | 3.84e-01 | 98.1% | 66.7% |
| 3212872 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 4.45e-01 | 100.0% | 97.4% |
| 5022769 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 43.0 | 4.22e-01 | 98.1% | 85.0% |
| 3914464 | 11.1.1.562 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BTBD16_C | 0.51 | 45.0 | 4.13e-01 | 100.0% | 97.1% |
| 3764712 | 11.1.1.118 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Adhes-Ig_like | 0.51 | 43.0 | 4.02e-01 | 98.1% | 74.6% |
| 3714801 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 4.00e-01 | 97.1% | 79.2% |
| 3781788 | 222.1.1.27 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27832 | 0.50 | 33.0 | 2.88e-01 | 76.2% | 41.8% |
| 3401662 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.50 | 42.0 | 4.23e-01 | 94.3% | 89.1% |
| 3508380 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 45.0 | 4.24e-01 | 100.0% | 97.7% |
D4
medium
residues 89-108_179-252
Domain cluster:
rep: IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074338__D532-550_611-692
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06605.19 best | Prophage_tail | 29.1 | 1.30e-06 | 83.0% | 39.8% |
D5
medium
residues 115-174
Domain cluster:
rep: CP063968.1__QPW62295.1__IG390_15080__00022__D201-256
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o5fA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 51.0 | 4.00e-01 | 96.7% | 97.7% |
| 3e0vB01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.58 | 45.0 | 3.28e-01 | 100.0% | 31.1% |
| 2v4iB01 | 3.30.2330.10 | Alpha Beta › 2-Layer Sandwich › arginine biosynthesis bifunctional protein fold › arginine biosynthesis bifunctional protein suprefamily | 0.57 | 49.0 | 4.60e-01 | 100.0% | 88.3% |
| 1hfvA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 47.0 | 3.54e-01 | 100.0% | 98.2% |
| 3cqbB01 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.51 | 43.0 | 3.77e-01 | 96.7% | 83.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588732 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.86 | 79.0 | 7.30e-01 | 100.0% | 82.7% |
| 4957567 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.72 | 63.0 | 6.02e-01 | 100.0% | 87.1% |
| 5067855 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.55 | 47.0 | 3.52e-01 | 100.0% | 95.8% |
| 3166586 | 3470.1.1.43 ↗ | extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › PF29527 | 0.55 | 39.0 | 4.09e-01 | 78.3% | 100.0% |
| 4507930 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.54 | 42.0 | 3.36e-01 | 100.0% | 42.4% |
| 5032747 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.52 | 36.0 | 2.99e-01 | 73.3% | 38.3% |
D6
medium
residues 415-472
Domain cluster:
representative
CATH (2)
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3583042 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.73 | 60.0 | 4.62e-01 | 94.8% | 42.9% |
| 4499276 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.72 | 59.0 | 5.36e-01 | 93.1% | 72.5% |
| 4465258 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.71 | 57.0 | 4.78e-01 | 89.7% | 56.0% |
| 3411216 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.71 | 57.0 | 4.88e-01 | 93.1% | 57.0% |
| 3559319 | 101.1.11.134 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › Sarcoglycan_1 | 0.69 | 56.0 | 5.59e-01 | 93.1% | 96.7% |
| 3932040 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.68 | 55.0 | 5.02e-01 | 93.1% | 72.5% |
| 3767876 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.65 | 52.0 | 4.02e-01 | 93.1% | 40.0% |
| 3287619 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.63 | 52.0 | 3.18e-01 | 94.8% | 16.0% |
| 1746334 | 79.1.1.12 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp138_C | 0.62 | 50.0 | 4.46e-01 | 94.8% | 60.0% |
| 3766391 | 77.1.1.2 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › FAM194 | 0.60 | 51.0 | 3.80e-01 | 100.0% | 52.5% |
| 4952059 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.58 | 35.0 | 3.18e-01 | 81.0% | 43.8% |
| 368152 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.56 | 40.0 | 3.00e-01 | 77.6% | 71.5% |
| 4230707 | 79.1.1.32 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › RHS_repeat, TEN_YD-shell | 0.55 | 42.0 | 2.64e-01 | 84.5% | 18.2% |
| 3546882 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.54 | 39.0 | 2.96e-01 | 75.9% | 48.5% |