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OQ709198.1__WGH19781.1__X__00098

Bact-Vir

OQ709198.1__WGH19781.1__X__00098

Identity

Accession:
OQ709198 ↗
Kingdom:
phage

Quality

87.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-92
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.66 56.0 4.40e-01 97.0% 80.1%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.63 52.0 4.13e-01 93.9% 44.3%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.62 43.0 3.56e-01 75.8% 97.7%
5jh8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 46.0 4.58e-01 97.0% 79.1%
4fh3A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.61 43.0 3.57e-01 75.8% 80.8%
3nybA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.60 49.0 4.25e-01 95.5% 88.2%
2rb7A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.60 47.0 3.21e-01 87.9% 51.8%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.60 43.0 4.08e-01 78.8% 69.9%
7yh2B01 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.60 49.0 3.85e-01 93.9% 96.0%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.59 47.0 4.97e-01 97.0% 100.0%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.59 51.0 3.52e-01 100.0% 89.8%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.59 41.0 3.47e-01 74.2% 100.0%
1u6zA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.59 40.0 2.98e-01 71.2% 100.0%
4ufcA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.59 44.0 2.84e-01 80.3% 99.1%
3r64A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.58 50.0 3.35e-01 100.0% 69.8%
2hg2A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.58 50.0 3.36e-01 100.0% 69.2%
3oajA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 42.0 3.35e-01 93.9% 36.1%
6bnzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 45.0 3.60e-01 95.5% 41.4%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.57 42.0 3.87e-01 78.8% 69.8%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.57 42.0 3.22e-01 78.8% 43.9%
1twuA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 44.0 3.54e-01 93.9% 41.6%
2j6lA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.57 49.0 3.22e-01 100.0% 66.3%
1ilyA00 3.30.420.100 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.57 41.0 3.82e-01 80.3% 83.3%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.57 48.0 3.57e-01 98.5% 95.2%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.57 40.0 3.51e-01 77.3% 89.9%
1skoA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 41.0 3.46e-01 78.8% 100.0%
4q05A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 44.0 2.89e-01 87.9% 74.9%
4nhxA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.56 42.0 2.98e-01 81.8% 84.2%
5izdA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.56 49.0 3.26e-01 100.0% 69.7%
2r5vB02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 44.0 3.23e-01 93.9% 30.3%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.56 45.0 4.01e-01 92.4% 74.5%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.56 41.0 4.04e-01 95.5% 73.0%
3cbfA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 45.0 3.37e-01 92.4% 69.1%
1yfbA00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.55 38.0 4.14e-01 74.2% 94.2%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 36.0 2.38e-01 77.3% 13.4%
3by9B01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 37.0 3.08e-01 72.7% 99.2%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.54 39.0 3.10e-01 78.8% 42.2%
3g7qA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 42.0 3.34e-01 90.9% 82.1%
1yqeA01 3.40.630.50 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like 0.54 44.0 3.34e-01 97.0% 93.0%
3oksA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 42.0 3.16e-01 86.4% 55.7%
3b46A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 42.0 3.28e-01 92.4% 66.3%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 39.0 3.24e-01 78.8% 96.6%
2epjA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 41.0 3.18e-01 92.4% 70.5%
2ea9A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 47.0 4.17e-01 100.0% 93.6%
4p4mA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.52 41.0 3.59e-01 93.9% 96.5%
1fo0B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.62e-01 93.9% 100.0%
3kljA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.51 37.0 3.55e-01 87.9% 63.9%
4jbeB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 43.0 2.87e-01 93.9% 58.8%
1o4sA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 40.0 3.20e-01 90.9% 68.9%
4opmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 44.0 2.94e-01 100.0% 58.9%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 42.0 3.54e-01 100.0% 94.4%
3l44A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 40.0 3.05e-01 93.9% 69.4%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4966333 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 47.0 4.81e-01 75.8% 86.2%
3652916 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.65 53.0 3.96e-01 95.5% 34.2%
5073955 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 45.0 3.82e-01 75.8% 93.3%
5083496 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 47.0 3.86e-01 78.8% 96.8%
4269649 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.63 45.0 3.81e-01 74.2% 95.5%
5050326 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 44.0 3.66e-01 75.8% 98.4%
5003862 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 45.0 3.60e-01 78.8% 87.9%
3474976 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.61 50.0 4.14e-01 95.5% 56.2%
4946458 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 37.0 2.88e-01 75.8% 29.6%
3195886 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.61 52.0 3.33e-01 100.0% 26.1%
5052689 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.61 43.0 3.64e-01 78.8% 98.4%
5071984 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 44.0 3.52e-01 78.8% 88.6%
5065002 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.60 44.0 3.63e-01 78.8% 97.6%
4972031 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 42.0 3.41e-01 75.8% 100.0%
3632181 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.59 49.0 3.73e-01 100.0% 52.4%
3970136 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.58 43.0 3.74e-01 78.8% 51.4%
4997112 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 39.0 3.11e-01 78.8% 35.4%
4939716 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.58 48.0 3.81e-01 95.5% 47.6%
None 0.58 42.0 2.58e-01 77.3% 17.0%
5050210 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.57 41.0 3.43e-01 75.8% 100.0%
4947114 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.57 47.0 3.64e-01 95.5% 43.0%
4976643 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.57 39.0 3.31e-01 74.2% 96.8%
3580101 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.57 49.0 3.75e-01 100.0% 93.9%
4072180 304.36.1.1 a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 0.56 41.0 3.70e-01 80.3% 80.0%
5044615 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 40.0 3.26e-01 77.3% 86.7%
5048528 268.1.1.0 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.55 40.0 3.39e-01 77.3% 94.8%
4976020 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 39.0 3.10e-01 78.8% 36.4%
5052577 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 39.0 3.21e-01 77.3% 100.0%
5051613 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 35.0 2.89e-01 78.8% 37.3%
3400015 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.54 38.0 3.19e-01 77.3% 93.1%
3739712 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.54 38.0 3.16e-01 77.3% 93.8%
5071935 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 36.0 2.96e-01 78.8% 36.2%
4440297 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 38.0 3.06e-01 77.3% 94.3%
3933484 241.1.1.2 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.53 40.0 3.17e-01 87.9% 83.0%
4945195 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 37.0 3.25e-01 77.3% 99.1%
4977561 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.53 38.0 2.46e-01 78.8% 20.1%
5074371 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 46.0 3.53e-01 100.0% 49.0%
4944313 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 35.0 2.87e-01 75.8% 40.7%
3399449 883.1.1.32 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › JHBP, Grp7_allergen 0.50 33.0 2.17e-01 71.2% 42.1%