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OQ709203.1__WGH20330.1__SEA_MAGUCO_38__00038

Bact-Vir

OQ709203.1__WGH20330.1__SEA_MAGUCO_38__00038

Identity

Accession:
OQ709203 ↗
Kingdom:
phage

Quality

82.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-68
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 65.0 6.54e-01 100.0% 90.0%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 56.0 5.39e-01 100.0% 67.6%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 54.0 5.28e-01 100.0% 68.2%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 52.0 4.99e-01 100.0% 62.3%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 63.0 5.98e-01 100.0% 78.6%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 63.0 5.75e-01 100.0% 70.5%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 53.0 5.26e-01 100.0% 71.4%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 64.0 6.28e-01 100.0% 87.5%
1ug1A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 65.0 5.54e-01 100.0% 62.0%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 52.0 4.70e-01 100.0% 55.0%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 65.0 6.36e-01 100.0% 90.6%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.73 50.0 5.46e-01 100.0% 89.6%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 63.0 6.21e-01 100.0% 90.5%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 5.25e-01 100.0% 83.0%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 60.0 5.83e-01 100.0% 83.3%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 63.0 6.07e-01 100.0% 97.0%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 64.0 6.14e-01 100.0% 89.6%
1m9sA04 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.70 62.0 5.48e-01 100.0% 81.4%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 63.0 6.12e-01 100.0% 92.2%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 61.0 5.93e-01 100.0% 90.9%
1dj7B00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 5.71e-01 100.0% 91.8%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 5.28e-01 100.0% 82.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 51.0 5.03e-01 100.0% 77.4%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 58.0 5.57e-01 100.0% 87.1%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.66 56.0 5.55e-01 100.0% 87.3%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 4.79e-01 100.0% 71.4%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 45.0 4.57e-01 98.3% 76.3%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 55.0 5.34e-01 100.0% 86.8%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.63 47.0 4.54e-01 100.0% 72.7%
1xovA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 52.0 5.07e-01 98.3% 87.9%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.60 51.0 4.70e-01 100.0% 82.5%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.58 50.0 3.44e-01 100.0% 28.6%
4gzuA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 46.0 3.58e-01 94.9% 61.3%
1x05A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 3.79e-01 96.6% 73.6%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 46.0 3.70e-01 94.9% 91.4%
4nh0B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 44.0 2.91e-01 91.5% 79.3%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 45.0 3.83e-01 94.9% 82.6%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 45.0 3.80e-01 94.9% 87.2%
2cocA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.83e-01 93.2% 93.0%
3tfmA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.86e-01 94.9% 92.9%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.85e-01 96.6% 87.4%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.74e-01 96.6% 81.8%
1u5dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.70e-01 94.9% 91.7%
3h0gH00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 43.0 3.59e-01 98.3% 87.9%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.64e-01 96.6% 78.1%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.60e-01 94.9% 80.0%
3vwcA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 42.0 3.36e-01 94.9% 99.3%
1upqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.73e-01 96.6% 85.0%
3cxbB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.76e-01 96.6% 91.3%
1droA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.47e-01 93.2% 90.2%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.28e-01 96.6% 70.6%
4nh0A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 41.0 2.83e-01 89.8% 92.6%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.53 36.0 3.69e-01 86.4% 74.1%
6o1wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 41.0 2.77e-01 89.8% 91.0%
3lhiA00 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 40.0 2.85e-01 91.5% 77.4%
1v5pA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.60e-01 96.6% 95.1%
1yt3A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 38.0 2.76e-01 84.7% 47.4%
3nwpA00 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 38.0 2.74e-01 91.5% 75.5%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3496355 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 66.0 6.84e-01 98.3% 96.4%
3326132 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 54.0 5.30e-01 100.0% 66.2%
3413864 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.78 66.0 4.68e-01 100.0% 32.7%
3924338 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 65.0 6.15e-01 100.0% 77.1%
4998726 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 51.0 4.59e-01 100.0% 50.0%
3702915 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 65.0 6.50e-01 100.0% 90.0%
3621818 4.1.1.333 beta barrels › SH3 › SH3 › SH3 › PF29330 0.77 53.0 5.72e-01 100.0% 86.0%
3626531 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 64.0 5.54e-01 100.0% 60.0%
3898952 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 65.0 6.03e-01 100.0% 73.3%
3900733 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.76 65.0 6.14e-01 100.0% 78.6%
3993250 4.1.1.333 beta barrels › SH3 › SH3 › SH3 › PF29330 0.76 53.0 5.49e-01 100.0% 78.2%
3522694 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.76 68.0 5.70e-01 100.0% 60.0%
3494765 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.76 64.0 4.25e-01 100.0% 24.5%
3600486 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 64.0 5.31e-01 100.0% 54.0%
3523979 604.12.1.118 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF4537 0.76 55.0 5.48e-01 100.0% 75.0%
3529708 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 65.0 5.95e-01 100.0% 73.3%
3880325 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.76 63.0 6.00e-01 98.3% 77.1%
3484007 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 64.0 6.07e-01 100.0% 78.6%
3514453 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 64.0 5.85e-01 100.0% 72.0%
3498145 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 63.0 6.19e-01 100.0% 84.4%
4218142 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.75 53.0 4.44e-01 100.0% 44.0%
3537941 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 66.0 5.83e-01 100.0% 67.1%
3224981 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 63.0 6.27e-01 100.0% 90.0%
4134876 4.1.1.334 beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.75 62.0 4.48e-01 100.0% 32.7%
3397846 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 52.0 5.43e-01 100.0% 80.0%
4091533 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.74 67.0 6.34e-01 100.0% 90.0%
3920026 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.74 52.0 3.55e-01 100.0% 21.0%
3554995 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 62.0 5.87e-01 100.0% 77.1%
4003181 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 67.0 6.67e-01 100.0% 96.7%
3579728 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 64.0 6.04e-01 100.0% 80.0%
3482676 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 64.0 6.40e-01 100.0% 93.3%
4127826 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.74 66.0 6.46e-01 100.0% 93.8%
526 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.54e-01 100.0% 62.0%
3999508 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 66.0 6.20e-01 100.0% 82.9%
4038705 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.73 66.0 6.40e-01 100.0% 95.4%
3234923 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 65.0 6.39e-01 100.0% 92.1%
3401198 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 66.0 5.67e-01 100.0% 70.0%
3522718 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 64.0 6.42e-01 100.0% 95.0%
3920897 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 64.0 5.88e-01 100.0% 76.0%
3864347 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 65.0 6.28e-01 100.0% 93.8%
3474075 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 66.0 6.09e-01 100.0% 79.7%
1263713 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.72 51.0 5.34e-01 100.0% 84.6%
3482677 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 63.0 6.00e-01 100.0% 81.4%
4291404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 64.0 5.95e-01 100.0% 85.3%
3022801 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 65.0 5.67e-01 100.0% 67.8%
3879164 4.1.1.91 beta barrels › SH3 › SH3 › SH3 › hSH3 0.72 62.0 5.69e-01 100.0% 74.7%
4537356 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.71 62.0 6.22e-01 96.6% 98.3%
1290375 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.71 63.0 6.01e-01 100.0% 95.6%
3569289 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.71 62.0 5.64e-01 100.0% 78.8%
5063004 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 63.0 6.15e-01 100.0% 90.8%
3025579 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 60.0 5.99e-01 100.0% 95.0%
1717442 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 63.0 5.34e-01 100.0% 62.8%
3894798 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.70 50.0 5.62e-01 94.9% 100.0%
3840076 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.70 62.0 6.19e-01 100.0% 100.0%
3918564 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 62.0 5.74e-01 100.0% 81.3%
3779830 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.68 55.0 4.78e-01 100.0% 57.8%
1263586 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.50e-01 100.0% 84.7%
3563220 4.1.1.220 beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor 0.65 52.0 4.72e-01 100.0% 65.0%
403788 4.1.1.100 beta barrels › SH3 › SH3 › SH3 › SH3_11 0.65 50.0 4.96e-01 100.0% 79.4%
4030499 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 46.0 3.69e-01 94.9% 76.1%
3399723 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 46.0 3.75e-01 94.9% 82.4%
3559299 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 47.0 3.73e-01 94.9% 73.1%
3252283 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 46.0 3.74e-01 94.9% 80.0%
3915831 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 46.0 3.74e-01 94.9% 72.8%
4029736 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.57 46.0 3.35e-01 94.9% 58.4%
3399270 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 45.0 3.69e-01 94.9% 72.0%
3397253 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 45.0 3.34e-01 94.9% 57.2%
3499463 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 45.0 2.58e-01 96.6% 14.2%
3497828 220.1.1.34 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_9 0.55 44.0 3.09e-01 94.9% 46.2%
3913945 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 44.0 3.62e-01 96.6% 84.4%
3255030 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.55 44.0 3.60e-01 94.9% 70.4%
3995979 220.1.1.34 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_9 0.55 44.0 3.56e-01 94.9% 73.1%
3777243 220.1.1.161 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 0.55 43.0 3.45e-01 93.2% 65.9%
3538314 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 43.0 3.57e-01 93.2% 75.8%
4543309 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 43.0 3.62e-01 94.9% 77.4%
3562058 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 43.0 3.54e-01 94.9% 75.2%
4203238 220.1.1.217 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM 0.54 42.0 2.94e-01 94.9% 35.6%
3536413 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 43.0 3.63e-01 94.9% 83.6%
3522681 220.1.1.164 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26089 0.53 43.0 3.38e-01 96.6% 84.8%
3889522 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 41.0 3.44e-01 93.2% 78.3%
3263571 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 42.0 3.12e-01 93.2% 58.9%
3897030 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 41.0 3.50e-01 93.2% 90.4%
D2 medium residues 72-140
PDB
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 57.0 6.09e-01 98.6% 93.2%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 61.0 6.26e-01 97.1% 97.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 57.0 5.96e-01 92.8% 95.3%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 59.0 6.07e-01 97.1% 98.4%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 4.69e-01 100.0% 43.7%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 58.0 5.90e-01 92.8% 94.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.52e-01 92.8% 90.3%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 4.96e-01 94.2% 72.1%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 52.0 5.31e-01 91.3% 88.1%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.66 60.0 4.78e-01 100.0% 69.2%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.63 57.0 5.20e-01 100.0% 84.4%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 37.0 4.11e-01 81.2% 83.7%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 38.0 4.12e-01 75.4% 79.3%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.59 50.0 4.89e-01 100.0% 85.7%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.59 47.0 4.17e-01 100.0% 58.7%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.59 40.0 4.31e-01 82.6% 87.5%
2dt4A00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.58 50.0 4.04e-01 100.0% 64.3%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 49.0 4.61e-01 100.0% 77.9%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.57 47.0 3.99e-01 100.0% 65.9%
1amiA04 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.57 44.0 3.24e-01 89.9% 82.8%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.56 48.0 4.47e-01 100.0% 75.3%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 42.0 3.29e-01 84.1% 50.6%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 44.0 2.80e-01 88.4% 41.7%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.56 38.0 3.93e-01 81.2% 76.6%
6jy5B00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.56 38.0 3.62e-01 71.0% 93.9%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 46.0 3.91e-01 95.7% 95.9%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 41.0 2.64e-01 84.1% 39.5%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 44.0 3.70e-01 91.3% 96.0%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 48.0 3.56e-01 100.0% 60.6%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 36.0 3.72e-01 81.2% 73.1%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 39.0 3.49e-01 81.2% 78.9%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.53 43.0 3.49e-01 89.9% 56.2%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 40.0 2.94e-01 85.5% 71.1%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 46.0 3.88e-01 100.0% 91.1%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 38.0 4.08e-01 92.8% 94.6%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 38.0 3.78e-01 84.1% 76.1%
1yr2A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.52 44.0 2.89e-01 97.1% 21.5%
2ov9C01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 40.0 3.31e-01 89.9% 87.1%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.52 43.0 3.38e-01 94.2% 87.1%
5tkyA04 2.60.34.10 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 0.51 41.0 3.56e-01 91.3% 88.8%
3gekA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 39.0 3.36e-01 89.9% 87.8%
3rwxA01 2.40.128.340 Mainly Beta › Beta Barrel › Lipocalin › 0.51 41.0 3.49e-01 89.9% 68.3%
3hduA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 39.0 3.20e-01 89.9% 91.4%
3vcxA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.51 28.0 3.07e-01 75.4% 64.2%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.51 36.0 2.61e-01 76.8% 77.0%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.50 39.0 2.82e-01 92.8% 63.7%
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 38.0 3.25e-01 91.3% 49.1%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3214131 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 59.0 5.62e-01 98.6% 66.3%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 58.0 6.33e-01 92.8% 91.4%
4241924 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.77 53.0 4.85e-01 92.8% 55.6%
3926118 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.76 62.0 6.57e-01 100.0% 100.0%
3517415 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.76 61.0 6.31e-01 98.6% 89.2%
3505589 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.75 60.0 4.90e-01 98.6% 48.3%
4284709 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.75 51.0 5.67e-01 94.2% 89.1%
3559960 2006.1.6.66 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 0.75 62.0 6.21e-01 98.6% 85.7%
4300449 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.75 55.0 5.65e-01 94.2% 81.5%
4000622 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.74 60.0 4.88e-01 98.6% 49.2%
5034724 4.1.1.482 beta barrels › SH3 › SH3 › SH3 › DUF4314 0.73 55.0 6.09e-01 89.9% 100.0%
3794500 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.73 59.0 4.23e-01 98.6% 31.9%
5075469 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.73 53.0 5.51e-01 95.7% 83.1%
3794445 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 58.0 5.56e-01 89.9% 75.0%
3742938 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.72 52.0 5.41e-01 91.3% 81.5%
4071917 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.72 50.0 5.61e-01 97.1% 100.0%
3787441 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 58.0 5.33e-01 92.8% 67.8%
3677709 4.1.1.103 beta barrels › SH3 › SH3 › SH3 › SH3_12 0.71 65.0 6.22e-01 100.0% 97.5%
3575435 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.71 58.0 5.22e-01 91.3% 64.2%
3932484 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 61.0 6.30e-01 100.0% 98.4%
4012002 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 60.0 6.04e-01 98.6% 92.9%
3581817 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.70 58.0 6.01e-01 100.0% 93.8%
3207081 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 58.0 6.02e-01 91.3% 96.9%
3480200 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 58.0 5.68e-01 92.8% 100.0%
3928430 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.69 57.0 5.74e-01 100.0% 88.6%
3213653 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 58.0 5.54e-01 92.8% 95.0%
3301015 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.85e-01 100.0% 95.4%
3487837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 60.0 4.28e-01 100.0% 33.5%
3703970 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.24e-01 100.0% 76.2%
3893892 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 57.0 5.43e-01 92.8% 96.2%
3886721 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.26e-01 94.2% 92.2%
3897512 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 55.0 5.30e-01 91.3% 97.5%
3226744 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.23e-01 94.2% 94.4%
4055974 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.67 58.0 4.86e-01 100.0% 64.8%
3510414 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 54.0 5.16e-01 89.9% 81.2%
3791777 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.65 59.0 5.44e-01 97.1% 87.1%
3166879 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 55.0 5.64e-01 98.6% 96.9%
5052257 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 43.0 4.59e-01 85.5% 80.0%
4629735 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 45.0 4.67e-01 91.3% 83.1%
3492018 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 56.0 4.83e-01 100.0% 63.8%
4026408 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.63 51.0 4.48e-01 100.0% 61.0%
3737837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 5.42e-01 95.7% 96.9%
3616769 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.62 50.0 4.50e-01 100.0% 64.2%
4943273 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 46.0 4.71e-01 97.1% 87.7%
4537528 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 54.0 5.43e-01 98.6% 97.1%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.60 51.0 5.00e-01 100.0% 88.0%
4366434 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.60 39.0 3.94e-01 81.2% 65.7%
3636503 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.59 51.0 5.13e-01 98.6% 94.3%
3687350 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 41.0 4.39e-01 81.2% 90.9%
3411042 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 45.0 4.79e-01 85.5% 98.3%
3997935 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.58 44.0 3.97e-01 87.0% 85.7%
5055172 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.57 39.0 4.20e-01 82.6% 89.1%
4068291 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.57 40.0 4.28e-01 87.0% 86.7%
2452960 520.1.1.0 beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related 0.57 45.0 4.16e-01 89.9% 67.8%
4578663 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.56 39.0 3.93e-01 73.9% 75.7%
3737927 220.1.1.294 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 0.56 43.0 3.77e-01 85.5% 77.3%
None 0.56 42.0 2.63e-01 84.1% 37.3%
3640114 222.1.1.15 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3C 0.53 41.0 3.22e-01 88.4% 68.2%
3188646 222.1.1.15 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3C 0.53 40.0 2.98e-01 88.4% 73.6%
3846584 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 39.0 2.99e-01 82.6% 65.1%
3785352 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.52 40.0 3.15e-01 88.4% 87.9%
4014654 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.52 40.0 3.35e-01 91.3% 94.3%
3956737 222.1.1.3 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl_CoA_thio 0.51 39.0 3.12e-01 89.9% 66.3%
4608521 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.51 39.0 2.98e-01 88.4% 60.5%
3706466 222.1.1.15 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3C 0.51 39.0 3.01e-01 91.3% 61.0%
3823844 222.1.1.15 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3C 0.51 39.0 3.09e-01 91.3% 61.1%
3721678 222.1.1.15 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3C 0.50 39.0 3.01e-01 91.3% 75.4%
4159881 220.1.1.197 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 0.50 40.0 3.69e-01 92.8% 94.7%
D3 medium residues 151-182
PDB