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OQ709205.1__WGH20644.1__SEA_BRAZZALEPHS_54__00054
Bact-VirOQ709205.1__WGH20644.1__SEA_BRAZZALEPHS_54__00054
Identity
- Accession:
- OQ709205 ↗
- Kingdom:
- phage
Quality
67.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Hodgkinviridae›
Quhwahvirus›
Microbacterium_phage_BrazzalePHS
TaxID: 3038369
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 88-136
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rmdA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.77 | 46.0 | 5.42e-01 | 73.5% | 96.7% |
| 2pw9C02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.63 | 52.0 | 5.06e-01 | 100.0% | 93.1% |
| 3e8mA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.62 | 48.0 | 3.37e-01 | 85.7% | 68.9% |
| 3ednA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.61 | 44.0 | 3.13e-01 | 79.6% | 48.8% |
| 1xubA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.61 | 45.0 | 3.27e-01 | 81.6% | 52.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.61 | 50.0 | 4.18e-01 | 98.0% | 94.6% |
| 7k98B04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 49.0 | 3.22e-01 | 95.9% | 59.6% |
| 7yulA01 | 1.10.10.2590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain | 0.56 | 43.0 | 3.78e-01 | 91.8% | 90.6% |
| 6et0A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 42.0 | 3.18e-01 | 95.9% | 39.7% |
| 1v6eA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 44.0 | 3.90e-01 | 100.0% | 96.2% |
| 2ok5A02 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 40.0 | 2.67e-01 | 85.7% | 50.2% |
| 3bzbB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 38.0 | 2.66e-01 | 85.7% | 94.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3538555 | 386.1.1.108 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-H2C2_2 | 0.75 | 48.0 | 4.52e-01 | 73.5% | 53.3% |
| 3238459 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.73 | 56.0 | 5.12e-01 | 83.7% | 72.3% |
| 3293480 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.68 | 51.0 | 4.74e-01 | 85.7% | 70.8% |
| 3203857 | 386.1.1.25 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-H2C2_5 | 0.67 | 56.0 | 4.95e-01 | 98.0% | 68.0% |
| 3702727 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 52.0 | 4.29e-01 | 95.9% | 49.0% |
| 3326759 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.62 | 51.0 | 4.60e-01 | 100.0% | 73.3% |
| 3931118 | 3075.1.1.1 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › PFU | 0.62 | 50.0 | 4.67e-01 | 98.0% | 78.5% |
| 3347927 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.58 | 44.0 | 2.73e-01 | 81.6% | 44.6% |
| 3391648 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 46.0 | 4.12e-01 | 100.0% | 91.3% |
| 3209157 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.54 | 42.0 | 2.89e-01 | 93.9% | 32.9% |
| 5030672 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 42.0 | 2.79e-01 | 100.0% | 23.4% |