←Back to structures

OQ709208.1__WGH20851.1__X__00068

Bact-Vir

OQ709208.1__WGH20851.1__X__00068

Identity

Accession:
OQ709208 ↗
Kingdom:
phage

Quality

80.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zierdtviridae› Commandariavirus› Gordonia_phage_Commandaria

TaxID: 3038364

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-102
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.77 43.0 4.71e-01 77.4% 66.2%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 42.0 3.38e-01 77.4% 57.1%
5cxoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 3.82e-01 81.7% 84.3%
3bnvD00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 46.0 4.02e-01 100.0% 86.7%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 36.0 3.11e-01 83.9% 47.2%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.76e-01 92.5% 70.9%
1gkaB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 44.0 3.64e-01 100.0% 63.8%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4387111 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 43.0 4.63e-01 77.4% 77.5%
4425420 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 43.0 4.48e-01 78.5% 72.9%
4642857 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 41.0 4.34e-01 79.6% 80.0%
4405445 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 38.0 4.28e-01 79.6% 91.4%
5065631 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.56 38.0 4.41e-01 95.7% 100.0%
4545039 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 39.0 4.34e-01 80.6% 97.1%
3472532 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 41.0 3.60e-01 80.6% 78.6%
3718969 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.54 41.0 3.32e-01 79.6% 71.4%
3719639 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 40.0 3.67e-01 78.5% 68.0%
3472188 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 42.0 2.85e-01 87.1% 53.1%
3591693 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.52 39.0 3.50e-01 78.5% 65.4%
3263832 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.52 39.0 3.78e-01 98.9% 69.5%
3222570 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 40.0 3.79e-01 84.9% 75.7%
3911248 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.51 36.0 3.73e-01 74.2% 87.8%
3476768 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 43.0 3.54e-01 92.5% 77.1%
3710893 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 35.0 3.22e-01 79.6% 52.3%
3555102 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 40.0 3.75e-01 88.2% 81.7%
4020166 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.50 41.0 3.49e-01 88.2% 86.7%