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OQ709216.1__WGH21373.1__SEA_EMOTION_24__00024

Bact-Vir

OQ709216.1__WGH21373.1__SEA_EMOTION_24__00024

Identity

Accession:
OQ709216 ↗
Kingdom:
phage

Quality

66.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-15_32-95
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u1wA02 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 51.0 5.51e-01 88.5% 98.5%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 57.0 4.62e-01 96.2% 56.0%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 32.0 3.85e-01 76.9% 73.5%
3cddA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.61 45.0 3.45e-01 79.5% 92.4%
7qs4A01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.61 46.0 3.60e-01 83.3% 55.9%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 4.54e-01 82.1% 82.7%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.59 45.0 3.78e-01 82.1% 66.7%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 43.0 4.64e-01 96.2% 92.4%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.58 43.0 2.95e-01 82.1% 21.9%
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.57 40.0 3.75e-01 98.7% 58.8%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.98e-01 80.8% 88.9%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 41.0 3.64e-01 78.2% 95.6%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 47.0 3.05e-01 93.6% 98.9%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 41.0 4.00e-01 79.5% 77.9%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 4.05e-01 82.1% 90.9%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 4.36e-01 82.1% 100.0%
1xv2C01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.55 36.0 3.22e-01 80.8% 46.8%
1fuwA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 3.82e-01 78.2% 83.5%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.55 41.0 3.92e-01 79.5% 96.7%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 3.71e-01 88.5% 83.6%
1c1fA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 3.64e-01 88.5% 85.2%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 3.97e-01 83.3% 91.9%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.53 39.0 3.81e-01 82.1% 85.7%
3zxfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.57e-01 89.7% 83.7%
5ji7A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.52 45.0 3.46e-01 100.0% 84.4%
4aefA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.50e-01 74.4% 91.6%
3t2lA02 2.60.40.2630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.25e-01 82.1% 84.2%
1akpA00 2.60.40.230 Mainly Beta › Sandwich › Immunoglobulin-like › Neocarzinostatin-like 0.52 37.0 3.28e-01 74.4% 95.6%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 41.0 3.47e-01 88.5% 80.4%
3gvzA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.52 46.0 3.22e-01 100.0% 39.1%
2wsuA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.50e-01 89.7% 79.9%
5xrkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.48e-01 89.7% 80.9%
6obtA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.52 43.0 3.07e-01 97.4% 89.2%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.51 38.0 3.59e-01 79.5% 90.4%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 3.38e-01 89.7% 76.4%
7bsbI01 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.50 36.0 3.13e-01 76.9% 100.0%
5c33A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.50 43.0 3.38e-01 98.7% 67.8%
3mepA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 42.0 3.23e-01 92.3% 56.4%
4agrB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 3.36e-01 89.7% 81.2%
4qt6A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.50 41.0 3.32e-01 92.3% 63.5%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4327595 4.1.1.402 beta barrels › SH3 › SH3 › SH3 › DUF2761 0.72 56.0 5.21e-01 82.1% 73.7%
5051444 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.69 47.0 3.74e-01 70.5% 69.7%
3931562 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.66 44.0 3.10e-01 98.7% 23.6%
3229045 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.66 37.0 3.45e-01 88.5% 44.2%
4300449 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.65 43.0 4.70e-01 70.5% 83.1%
3300506 4286.1.1.1 beta complex topology › At5g01610-like › At5g01610-like › At5g01610-like › DUF538 0.64 50.0 4.05e-01 82.1% 75.0%
4247302 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.62 39.0 3.75e-01 100.0% 54.4%
3855038 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.62 49.0 3.88e-01 94.9% 41.9%
4213135 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.61 46.0 3.98e-01 82.1% 55.6%
3638434 76.1.1.0 beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I 0.61 44.0 3.69e-01 75.6% 47.2%
3559236 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.60 30.0 3.44e-01 75.6% 63.6%
4971532 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 43.0 4.56e-01 82.1% 84.3%
4359927 2003.1.2.99 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, FAD_binding_3 0.60 46.0 3.40e-01 82.1% 68.7%
4659931 2003.1.2.99 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, FAD_binding_3 0.59 46.0 2.97e-01 82.1% 39.4%
2664854 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.59 44.0 4.12e-01 82.1% 67.6%
3703790 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.59 52.0 3.24e-01 96.2% 62.6%
3616769 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.59 44.0 4.18e-01 80.8% 67.4%
3409083 220.1.1.46 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.58 47.0 3.92e-01 88.5% 77.8%
3290548 3445.1.1.1 beta barrels › Uncharacterized protein from gene locus rrnAC0354 › Uncharacterized protein from gene locus rrnAC0354 › Uncharacterized protein from gene locus rrnAC0354 › DUF1684 0.58 45.0 3.59e-01 85.9% 71.5%
4946568 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 50.0 2.98e-01 100.0% 20.6%
4962778 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.57 42.0 3.97e-01 80.8% 89.9%
4946869 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 50.0 3.74e-01 100.0% 66.2%
4961450 4111.1.1.2 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.57 43.0 3.63e-01 82.1% 66.7%
3269422 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.56 46.0 3.17e-01 94.9% 25.9%
3630302 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.56 41.0 3.67e-01 76.9% 76.4%
3702975 3556.1.1.0 a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 0.55 48.0 4.55e-01 96.2% 86.2%
3471770 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 48.0 2.91e-01 96.2% 61.2%
4121572 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.55 50.0 3.21e-01 100.0% 31.5%
5041229 375.13.1.0 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain 0.54 39.0 4.29e-01 97.4% 100.0%
5021185 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 45.0 3.52e-01 93.6% 56.0%
4633575 222.1.1.12 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.53 42.0 3.40e-01 91.0% 67.6%
3204420 76.1.1.0 beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I 0.53 39.0 3.01e-01 78.2% 99.4%
3688824 318.1.1.0 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.52 40.0 3.74e-01 82.1% 84.2%
2720803 5.1.4.338 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF28639 0.51 43.0 3.46e-01 89.7% 84.4%
3203736 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 44.0 3.49e-01 100.0% 80.0%
1487392 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.50 41.0 3.33e-01 92.3% 63.5%