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OQ709222.1__WGH21906.1__SEA_TROGGLEHUMPER_22__00022
Bact-VirOQ709222.1__WGH21906.1__SEA_TROGGLEHUMPER_22__00022
Identity
- Accession:
- OQ709222 ↗
- Kingdom:
- phage
Quality
76.3
mean pLDDT
Taxonomy
TaxID: 3038381
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 66-179
Domain cluster:
rep: ON135435.1__UPI15601.1__PhiBP823_50__00050__D56-144
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01807.26 best | Zn_ribbon_DnaG | 33.4 | 4.40e-08 | 91.2% | 63.3% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d0qA00 | 3.90.580.10 | Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain | 0.79 | 65.0 | 6.84e-01 | 99.1% | 97.1% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.59 | 26.0 | 3.11e-01 | 72.8% | 58.0% |
| 4jqfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 26.0 | 3.21e-01 | 73.7% | 67.1% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 44.0 | 4.05e-01 | 90.4% | 92.8% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 20.0 | 2.76e-01 | 72.8% | 63.8% |
| 1xp8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.53 | 29.0 | 3.58e-01 | 84.2% | 95.0% |
| 2i5bA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 40.0 | 3.14e-01 | 82.5% | 94.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4166935 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.84 | 68.0 | 7.23e-01 | 98.2% | 97.0% |
| 4680318 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.81 | 62.0 | 6.85e-01 | 99.1% | 100.0% |
| 5003468 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.81 | 68.0 | 7.10e-01 | 98.2% | 96.2% |
| 3590274 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 60.0 | 6.70e-01 | 87.7% | 100.0% |
| 8015 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.79 | 65.0 | 6.84e-01 | 99.1% | 97.1% |
| 4539347 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.79 | 64.0 | 6.79e-01 | 98.2% | 97.0% |
| 4940785 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 64.0 | 6.45e-01 | 88.6% | 90.4% |
| 4023805 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 49.0 | 5.62e-01 | 80.7% | 98.8% |
| 4995759 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 43.0 | 4.97e-01 | 77.2% | 100.0% |
| 3602639 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 48.0 | 4.94e-01 | 97.4% | 98.2% |
D2
high
residues 731-796
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 68.0 | 5.69e-01 | 100.0% | 50.0% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 67.0 | 5.76e-01 | 100.0% | 53.1% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 67.0 | 5.06e-01 | 100.0% | 36.6% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 70.0 | 5.70e-01 | 100.0% | 50.0% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 66.0 | 6.07e-01 | 100.0% | 63.5% |
| 2f2eA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 62.0 | 5.50e-01 | 100.0% | 54.9% |
| 1ku9B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 64.0 | 5.77e-01 | 100.0% | 59.8% |
| 5jbrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 64.0 | 5.80e-01 | 100.0% | 60.5% |
| 1z7uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 64.0 | 5.30e-01 | 100.0% | 47.3% |
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 65.0 | 5.82e-01 | 100.0% | 59.6% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 65.0 | 5.49e-01 | 100.0% | 51.5% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 68.0 | 6.16e-01 | 100.0% | 65.9% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 63.0 | 5.22e-01 | 100.0% | 46.4% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 68.0 | 5.69e-01 | 100.0% | 53.3% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 66.0 | 5.60e-01 | 100.0% | 52.4% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 66.0 | 6.13e-01 | 100.0% | 67.1% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 67.0 | 6.60e-01 | 100.0% | 81.2% |
| 3nqoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 64.0 | 4.60e-01 | 100.0% | 30.5% |
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 62.0 | 4.65e-01 | 100.0% | 34.7% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 65.0 | 5.99e-01 | 100.0% | 67.1% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 63.0 | 6.39e-01 | 100.0% | 81.8% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 62.0 | 5.91e-01 | 100.0% | 68.8% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 68.0 | 5.74e-01 | 100.0% | 56.3% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 68.0 | 5.96e-01 | 100.0% | 61.5% |
| 4g6qA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 63.0 | 5.71e-01 | 100.0% | 62.1% |
| 3u1dB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 69.0 | 5.26e-01 | 100.0% | 42.0% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 63.0 | 6.24e-01 | 100.0% | 78.6% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 60.0 | 5.19e-01 | 100.0% | 52.0% |
| 4y66F01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 61.0 | 6.14e-01 | 100.0% | 80.3% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 64.0 | 5.17e-01 | 100.0% | 46.7% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 60.0 | 6.11e-01 | 100.0% | 81.2% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 60.0 | 4.67e-01 | 100.0% | 38.7% |
| 3c18A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 62.0 | 6.57e-01 | 93.9% | 96.5% |
| 2lsoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 68.0 | 6.24e-01 | 100.0% | 73.5% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 66.0 | 5.53e-01 | 100.0% | 55.7% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 68.0 | 6.06e-01 | 100.0% | 68.5% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 63.0 | 5.54e-01 | 100.0% | 60.9% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 64.0 | 5.48e-01 | 100.0% | 57.3% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 55.0 | 5.22e-01 | 100.0% | 62.5% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 63.0 | 5.36e-01 | 100.0% | 55.2% |
| 3l09A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 62.0 | 5.68e-01 | 100.0% | 67.9% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 67.0 | 5.33e-01 | 100.0% | 49.6% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 66.0 | 5.92e-01 | 100.0% | 69.2% |
| 4ad9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 63.0 | 5.74e-01 | 100.0% | 70.2% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 63.0 | 5.22e-01 | 100.0% | 53.0% |
| 3e1sA01 | 1.10.10.2220 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.72 | 62.0 | 5.51e-01 | 98.5% | 67.4% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 58.0 | 4.81e-01 | 100.0% | 51.3% |
| 1vtnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 62.0 | 5.38e-01 | 100.0% | 65.7% |
| 2kpmA01 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.69 | 61.0 | 5.88e-01 | 100.0% | 89.3% |
| 3htuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 5.25e-01 | 100.0% | 82.7% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 55.0 | 4.59e-01 | 100.0% | 54.2% |
| 5dcaA11 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 57.0 | 4.92e-01 | 100.0% | 73.3% |
| 2mbfA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 54.0 | 4.87e-01 | 100.0% | 74.2% |
| 1xb4B01 | 1.10.10.570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" | 0.62 | 56.0 | 4.79e-01 | 100.0% | 67.3% |
| 4p55B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 50.0 | 4.54e-01 | 100.0% | 91.7% |
| 2k4jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 50.0 | 4.34e-01 | 98.5% | 61.0% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.58 | 48.0 | 4.59e-01 | 100.0% | 85.0% |
| 4lhfA00 | 6.10.200.10 | Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox | 0.54 | 40.0 | 3.85e-01 | 90.9% | 68.4% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.53 | 41.0 | 3.79e-01 | 87.9% | 65.9% |
| 4ne4A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 40.0 | 3.07e-01 | 87.9% | 74.9% |
| 1m0sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 36.0 | 3.57e-01 | 98.5% | 69.4% |
| 2k6vA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 42.0 | 3.28e-01 | 100.0% | 56.4% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4965874 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.90 | 71.0 | 5.46e-01 | 100.0% | 41.0% |
| 5016748 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.89 | 70.0 | 5.62e-01 | 100.0% | 45.8% |
| 4971744 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.88 | 68.0 | 6.21e-01 | 100.0% | 63.5% |
| 3286028 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.88 | 70.0 | 6.73e-01 | 100.0% | 74.7% |
| 5033290 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.87 | 68.0 | 5.47e-01 | 100.0% | 45.8% |
| 5079768 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 66.0 | 6.01e-01 | 100.0% | 63.1% |
| 3449813 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 74.0 | 7.05e-01 | 100.0% | 80.0% |
| 3443787 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 74.0 | 6.71e-01 | 100.0% | 70.6% |
| 5045747 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.86 | 71.0 | 6.34e-01 | 100.0% | 64.4% |
| 5039984 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.86 | 67.0 | 4.91e-01 | 100.0% | 33.3% |
| 4986012 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.86 | 66.0 | 4.52e-01 | 100.0% | 25.7% |
| 4304354 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.86 | 67.0 | 6.63e-01 | 100.0% | 78.6% |
| 4946114 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 67.0 | 5.68e-01 | 100.0% | 52.9% |
| 4547759 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.85 | 67.0 | 6.62e-01 | 100.0% | 78.6% |
| 4948474 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 68.0 | 6.68e-01 | 100.0% | 80.0% |
| 4983992 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.85 | 66.0 | 4.87e-01 | 100.0% | 34.8% |
| 3330019 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.85 | 71.0 | 5.79e-01 | 100.0% | 51.3% |
| 4097415 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.85 | 67.0 | 6.55e-01 | 100.0% | 78.6% |
| 3958859 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 67.0 | 6.27e-01 | 100.0% | 70.0% |
| 5078403 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.85 | 66.0 | 6.36e-01 | 100.0% | 73.3% |
| 5035522 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.84 | 70.0 | 5.86e-01 | 100.0% | 55.2% |
| 5069274 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.84 | 66.0 | 5.39e-01 | 100.0% | 47.8% |
| 4976773 | 101.1.2.275 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF1495 | 0.84 | 67.0 | 5.56e-01 | 100.0% | 50.9% |
| 5041543 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.84 | 66.0 | 5.04e-01 | 100.0% | 39.3% |
| 3957963 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.84 | 73.0 | 6.34e-01 | 100.0% | 64.2% |
| 4979485 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.84 | 65.0 | 6.21e-01 | 98.5% | 72.0% |
| 5012029 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.84 | 66.0 | 5.30e-01 | 100.0% | 45.8% |
| 5061514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 65.0 | 4.60e-01 | 100.0% | 28.9% |
| 4976847 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.84 | 64.0 | 5.36e-01 | 100.0% | 49.1% |
| 5031473 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.83 | 69.0 | 5.80e-01 | 100.0% | 55.2% |
| 5031662 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.83 | 69.0 | 5.46e-01 | 100.0% | 46.4% |
| 5045969 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.83 | 66.0 | 5.73e-01 | 100.0% | 57.9% |
| 5011653 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.83 | 67.0 | 5.51e-01 | 100.0% | 50.9% |
| 4994794 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 71.0 | 6.81e-01 | 100.0% | 80.0% |
| 5022036 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 65.0 | 5.03e-01 | 100.0% | 40.7% |
| 5000571 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.83 | 67.0 | 6.28e-01 | 100.0% | 71.2% |
| 4927759 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.83 | 64.0 | 4.71e-01 | 100.0% | 33.8% |
| 5025618 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 64.0 | 5.38e-01 | 100.0% | 50.0% |
| 5033035 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 65.0 | 5.25e-01 | 100.0% | 46.6% |
| 3281274 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.83 | 65.0 | 6.05e-01 | 100.0% | 68.8% |
| 4478972 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.83 | 69.0 | 5.72e-01 | 100.0% | 53.6% |
| 4999154 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.82 | 64.0 | 5.89e-01 | 100.0% | 64.7% |
| 4944051 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 69.0 | 4.98e-01 | 100.0% | 34.7% |
| 4998580 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 64.0 | 5.68e-01 | 100.0% | 60.0% |
| 4990676 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.82 | 75.0 | 6.25e-01 | 100.0% | 64.5% |
| 3960437 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 70.0 | 5.05e-01 | 98.5% | 35.3% |
| 4934055 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.82 | 69.0 | 6.41e-01 | 100.0% | 73.8% |
| 4947441 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 63.0 | 5.75e-01 | 100.0% | 63.5% |
| 4999546 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.82 | 69.0 | 6.06e-01 | 100.0% | 63.2% |
| 4974447 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 63.0 | 5.15e-01 | 100.0% | 45.8% |
| 4985036 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.82 | 64.0 | 4.64e-01 | 100.0% | 32.4% |
| 5030563 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.82 | 65.0 | 5.68e-01 | 100.0% | 58.9% |
| 5022936 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 68.0 | 5.72e-01 | 100.0% | 54.5% |
| 4998031 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.81 | 63.0 | 4.53e-01 | 100.0% | 31.2% |
| 4941699 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 65.0 | 6.21e-01 | 100.0% | 74.7% |
| 4971686 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.81 | 68.0 | 5.71e-01 | 100.0% | 56.2% |
| 5035685 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.81 | 71.0 | 5.63e-01 | 100.0% | 50.0% |
| 3289681 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.81 | 71.0 | 4.90e-01 | 100.0% | 31.8% |
| 5077022 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.81 | 67.0 | 5.77e-01 | 100.0% | 59.0% |
| 4672256 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.81 | 74.0 | 6.05e-01 | 100.0% | 60.9% |
| 5061948 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.80 | 72.0 | 5.42e-01 | 100.0% | 43.8% |
| 4996031 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 68.0 | 6.18e-01 | 100.0% | 70.6% |
| 3286725 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.80 | 72.0 | 5.03e-01 | 100.0% | 34.1% |
| 4061942 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.80 | 73.0 | 5.85e-01 | 100.0% | 56.0% |
| 3468223 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.80 | 63.0 | 3.89e-01 | 100.0% | 15.9% |
| 1839917 | 101.1.2.171 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_52 | 0.80 | 65.0 | 6.55e-01 | 100.0% | 86.6% |
| 4358890 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.80 | 73.0 | 5.98e-01 | 100.0% | 60.9% |
| 4959599 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.80 | 70.0 | 5.70e-01 | 100.0% | 54.4% |
| 4978090 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.79 | 69.0 | 4.69e-01 | 100.0% | 28.8% |
| 5054914 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 66.0 | 5.47e-01 | 100.0% | 53.6% |
| 4981949 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 63.0 | 5.91e-01 | 100.0% | 71.2% |
| 4026717 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 62.0 | 6.12e-01 | 100.0% | 80.0% |
| 4456198 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 64.0 | 4.56e-01 | 100.0% | 31.4% |
| 4934296 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 71.0 | 6.02e-01 | 100.0% | 61.9% |
| 2494143 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.78 | 65.0 | 5.38e-01 | 100.0% | 53.2% |
| 4943782 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 66.0 | 5.32e-01 | 100.0% | 50.0% |
| 154263 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.78 | 64.0 | 5.48e-01 | 100.0% | 57.3% |
| 4944735 | 101.1.2.542 ↗ | alpha arrays › HTH › HTH › winged helix domain › ATPase_2 | 0.77 | 56.0 | 4.50e-01 | 86.4% | 40.8% |
| 5075771 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.76 | 66.0 | 5.45e-01 | 100.0% | 55.5% |
| 4995581 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.76 | 67.0 | 5.76e-01 | 100.0% | 63.0% |
| 4314672 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.76 | 67.0 | 5.65e-01 | 100.0% | 60.0% |
| 3268092 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 65.0 | 5.28e-01 | 100.0% | 51.7% |
| 3355197 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 64.0 | 5.55e-01 | 100.0% | 62.0% |
| 5018390 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 59.0 | 4.82e-01 | 100.0% | 47.1% |
| 4978855 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.75 | 66.0 | 5.38e-01 | 100.0% | 53.3% |
| 3250041 | 101.1.2.525 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7646 | 0.75 | 66.0 | 4.48e-01 | 100.0% | 28.4% |
| 164542 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.75 | 63.0 | 5.22e-01 | 100.0% | 53.0% |
| 4545670 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.74 | 67.0 | 5.84e-01 | 100.0% | 66.7% |
| 4957324 | 101.1.2.920 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C | 0.74 | 60.0 | 4.92e-01 | 100.0% | 48.0% |
| 3271616 | 101.1.2.147 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC4_C | 0.74 | 67.0 | 5.38e-01 | 100.0% | 59.2% |
| 5070036 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 67.0 | 5.04e-01 | 100.0% | 45.3% |
| 3575591 | 101.1.2.37 ↗ | alpha arrays › HTH › HTH › winged helix domain › E2F_TDP | 0.73 | 67.0 | 5.75e-01 | 100.0% | 72.0% |
| 3924465 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 67.0 | 5.40e-01 | 100.0% | 60.8% |
| 4928345 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 62.0 | 6.13e-01 | 98.5% | 88.4% |
| 3972430 | 101.1.2.213 ↗ | alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD | 0.73 | 64.0 | 6.15e-01 | 100.0% | 85.3% |
| 3240179 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 61.0 | 5.25e-01 | 100.0% | 63.8% |
| 4026870 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.69 | 62.0 | 5.23e-01 | 100.0% | 70.0% |
| 3187043 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 61.0 | 5.52e-01 | 100.0% | 82.2% |
| 3868765 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.67 | 61.0 | 5.38e-01 | 100.0% | 71.6% |
| 3609468 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 51.0 | 4.78e-01 | 100.0% | 75.3% |
D3
medium
residues 368-462_565-629
Domain cluster:
rep: IMGVR_UViG_3300000510_000431-3300000510-Foulum_10041203__D331-409_502-568
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 30.0 | 4.08e-01 | 91.3% | 92.7% |
| 3rimB01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.59 | 54.0 | 4.20e-01 | 100.0% | 94.0% |
| 2etnB01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.57 | 23.0 | 3.40e-01 | 90.6% | 81.6% |
| 2kseA00 | 1.20.5.1040 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Sensor protein qsec. | 0.54 | 23.0 | 3.25e-01 | 90.6% | 80.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5064031 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 58.0 | 4.54e-01 | 92.5% | 62.8% |
| 4934143 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 55.0 | 4.68e-01 | 95.0% | 90.8% |
| 3888292 | 2004.1.1.345 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF4062 | 0.52 | 36.0 | 3.14e-01 | 70.0% | 99.2% |
D4
medium
residues 463-564
Domain cluster:
rep: MH155870.1__AWN05310.1__SEA_IBANTIK_88__00086__D97-184
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mjfB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 47.0 | 3.63e-01 | 97.1% | 31.3% |
| 3zpgA02 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.66 | 44.0 | 3.41e-01 | 98.0% | 31.9% |
| 3mb5A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 40.0 | 3.25e-01 | 98.0% | 32.6% |
| 5znqA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 40.0 | 3.29e-01 | 99.0% | 36.6% |
| 5jnmA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 40.0 | 3.27e-01 | 96.1% | 35.5% |
| 1zl0B02 | 3.50.30.60 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like | 0.57 | 42.0 | 3.79e-01 | 98.0% | 56.8% |
| 2ph7A02 | 3.40.50.10670 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain | 0.55 | 38.0 | 3.96e-01 | 98.0% | 77.1% |
| 2iusA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 48.0 | 3.49e-01 | 98.0% | 46.6% |
| 3t5tA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 40.0 | 3.36e-01 | 95.1% | 42.6% |
| 1b2rA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.54 | 44.0 | 3.73e-01 | 100.0% | 53.3% |
| 4l80D00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.53 | 40.0 | 2.80e-01 | 100.0% | 23.8% |
| 6whcA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 45.0 | 3.60e-01 | 97.1% | 53.9% |
| 4y66F01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 25.0 | 3.02e-01 | 96.1% | 68.2% |
| 3l4gC03 | 1.10.10.2330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 26.0 | 3.33e-01 | 84.3% | 86.8% |
| 3nb0B02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 40.0 | 3.07e-01 | 95.1% | 34.8% |
| 6j19A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 46.0 | 3.40e-01 | 98.0% | 44.4% |
| 1lamA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.51 | 32.0 | 2.81e-01 | 87.3% | 38.8% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 27.0 | 2.68e-01 | 87.3% | 46.4% |
| 3h2zA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 38.0 | 3.09e-01 | 98.0% | 41.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4426944 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.72 | 48.0 | 3.64e-01 | 97.1% | 30.3% |
| 3614893 | 2004.1.1.493 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, AAA_2, AAA_5 | 0.63 | 56.0 | 3.90e-01 | 100.0% | 69.7% |
| 5013281 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 56.0 | 4.04e-01 | 100.0% | 68.4% |
| 3704999 | 2004.1.1.154 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 | 0.60 | 52.0 | 3.66e-01 | 99.0% | 93.2% |
| 3657227 | 2003.1.1.39 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP | 0.60 | 39.0 | 3.13e-01 | 96.1% | 32.4% |
| 4338409 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 49.0 | 4.11e-01 | 99.0% | 60.6% |
| 3971874 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 50.0 | 3.55e-01 | 100.0% | 47.9% |
| 3717115 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 43.0 | 3.22e-01 | 96.1% | 33.1% |
| 3206679 | 2004.1.1.325 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TRAPPC-Trs85 | 0.53 | 39.0 | 3.16e-01 | 97.1% | 38.6% |
| 4010286 | 101.1.2.300 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_41 | 0.50 | 29.0 | 3.12e-01 | 87.3% | 65.9% |
| 4961050 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.50 | 27.0 | 3.09e-01 | 87.3% | 69.3% |
D5
medium
residues 630-730
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.81 | 49.0 | 5.44e-01 | 74.3% | 74.7% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.79 | 49.0 | 5.37e-01 | 75.2% | 75.9% |
| 2x8aA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.77 | 47.0 | 5.22e-01 | 73.3% | 77.5% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.74 | 32.0 | 3.74e-01 | 83.2% | 56.2% |
| 1q9cA01 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.74 | 50.0 | 4.41e-01 | 70.3% | 86.4% |
| 4zpxA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 49.0 | 5.16e-01 | 73.3% | 75.0% |
| 2yfvA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.73 | 38.0 | 4.58e-01 | 75.2% | 75.0% |
| 1tafB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.73 | 35.0 | 4.23e-01 | 75.2% | 68.6% |
| 3ja8204 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 57.0 | 3.89e-01 | 83.2% | 80.8% |
| 1tafA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.72 | 37.0 | 4.50e-01 | 75.2% | 75.0% |
| 2rvqC01 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 36.0 | 4.08e-01 | 77.2% | 67.1% |
| 4irfB00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.68 | 47.0 | 4.11e-01 | 70.3% | 83.3% |
| 1fnnA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 46.0 | 4.69e-01 | 70.3% | 97.0% |
| 2ly8A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 48.0 | 4.49e-01 | 72.3% | 78.5% |
| 1h3oB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 36.0 | 4.16e-01 | 72.3% | 73.0% |
| 4csrA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 37.0 | 3.93e-01 | 71.3% | 62.5% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.65 | 38.0 | 3.49e-01 | 82.2% | 44.4% |
| 2l5aA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.65 | 47.0 | 3.66e-01 | 76.2% | 91.1% |
| 1a7wA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.64 | 35.0 | 4.06e-01 | 70.3% | 76.5% |
| 2qbyA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 48.0 | 4.82e-01 | 81.2% | 98.1% |
| 1khyD00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.62 | 44.0 | 3.92e-01 | 72.3% | 87.1% |
| 2r44A03 | 1.10.8.80 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain | 0.60 | 47.0 | 4.55e-01 | 86.1% | 78.0% |
| 5y27A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.60 | 35.0 | 3.59e-01 | 72.3% | 58.2% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 42.0 | 4.62e-01 | 79.2% | 95.1% |
| 2sasA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.57 | 39.0 | 3.27e-01 | 71.3% | 51.9% |
| 1ng6A01 | 1.10.1510.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain | 0.56 | 40.0 | 4.22e-01 | 77.2% | 82.4% |
| 2r18A02 | 1.10.8.880 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Birnavirus VP3 protein, domain 2 | 0.55 | 33.0 | 4.00e-01 | 72.3% | 100.0% |
| 3kv0A01 | 1.10.3520.10 | Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein | 0.55 | 40.0 | 3.43e-01 | 76.2% | 72.4% |
| 1f68A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 40.0 | 4.01e-01 | 80.2% | 80.6% |
| 2qe7G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.52 | 35.0 | 3.64e-01 | 70.3% | 83.5% |
| 1kz7A01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.50 | 39.0 | 3.16e-01 | 83.2% | 71.5% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051690 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 51.0 | 5.38e-01 | 70.3% | 70.0% |
| 3396348 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.81 | 57.0 | 5.58e-01 | 76.2% | 66.4% |
| 3817287 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.81 | 57.0 | 6.04e-01 | 73.3% | 81.1% |
| 5050506 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.81 | 53.0 | 5.79e-01 | 71.3% | 80.0% |
| 3475867 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.81 | 58.0 | 6.59e-01 | 75.2% | 100.0% |
| 4237904 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.80 | 57.0 | 5.12e-01 | 74.3% | 54.8% |
| 4667812 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.79 | 56.0 | 5.37e-01 | 74.3% | 64.3% |
| 3416632 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.79 | 58.0 | 5.64e-01 | 76.2% | 70.9% |
| 3600430 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.78 | 58.0 | 5.24e-01 | 77.2% | 60.7% |
| 5029473 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.78 | 57.0 | 5.69e-01 | 76.2% | 77.1% |
| 4134768 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 47.0 | 5.54e-01 | 73.3% | 87.1% |
| 4024278 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.78 | 57.0 | 5.86e-01 | 75.2% | 81.1% |
| 5026918 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.78 | 60.0 | 6.05e-01 | 80.2% | 84.0% |
| 3494358 | 148.1.3.213 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_bind | 0.78 | 55.0 | 6.24e-01 | 77.2% | 97.3% |
| 4040236 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.78 | 55.0 | 6.14e-01 | 73.3% | 92.5% |
| 3491080 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.77 | 57.0 | 4.98e-01 | 76.2% | 53.1% |
| 5061244 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.77 | 49.0 | 5.49e-01 | 75.2% | 82.5% |
| 4374130 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 47.0 | 5.08e-01 | 74.3% | 72.9% |
| 3064129 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 57.0 | 6.32e-01 | 79.2% | 97.5% |
| 3184069 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.75 | 57.0 | 5.68e-01 | 79.2% | 76.2% |
| 5016180 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.75 | 60.0 | 6.35e-01 | 84.2% | 100.0% |
| 3978468 | 148.1.3.55 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Mg_chelatase_C | 0.75 | 49.0 | 5.42e-01 | 78.2% | 83.7% |
| 4981858 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 57.0 | 5.64e-01 | 80.2% | 76.2% |
| 3744257 | 2.1.1.228 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_bind | 0.74 | 50.0 | 5.52e-01 | 75.2% | 86.3% |
| 3557533 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.74 | 58.0 | 6.09e-01 | 82.2% | 97.8% |
| 3819132 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.74 | 56.0 | 5.76e-01 | 79.2% | 84.2% |
| 3621511 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.73 | 55.0 | 4.82e-01 | 79.2% | 54.5% |
| 4934144 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 53.0 | 5.84e-01 | 76.2% | 95.0% |
| 3268763 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.73 | 55.0 | 5.40e-01 | 80.2% | 96.4% |
| 4947854 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 57.0 | 5.92e-01 | 82.2% | 91.6% |
| 4959600 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 55.0 | 5.94e-01 | 80.2% | 100.0% |
| 5044337 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 52.0 | 5.40e-01 | 77.2% | 80.0% |
| 3059782 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 60.0 | 5.46e-01 | 92.1% | 77.2% |
| 4981595 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 54.0 | 5.50e-01 | 80.2% | 92.0% |
| 5000622 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.70 | 49.0 | 5.17e-01 | 71.3% | 93.3% |
| 4128045 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.70 | 51.0 | 5.30e-01 | 76.2% | 81.1% |
| 3596205 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 52.0 | 5.39e-01 | 79.2% | 85.3% |
| 4483086 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 48.0 | 4.93e-01 | 87.1% | 80.0% |
| 3414399 | 5086.1.1.106 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 | 0.63 | 44.0 | 3.74e-01 | 72.3% | 98.2% |
| 3313420 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.63 | 49.0 | 4.40e-01 | 83.2% | 82.9% |
| 3923736 | 551.1.1.1 ↗ | alpha arrays › Hsp90 co-chaperone CDC37 middle domain › Hsp90 co-chaperone CDC37 middle domain › Hsp90 co-chaperone CDC37 middle domain › CDC37_M | 0.61 | 50.0 | 4.48e-01 | 87.1% | 85.7% |
| 3829766 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.54 | 39.0 | 2.87e-01 | 75.2% | 29.3% |
| 3705699 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.52 | 36.0 | 3.02e-01 | 88.1% | 40.6% |
| 3708249 | 604.5.1.31 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TRAM_LAG1_CLN8 | 0.52 | 42.0 | 3.15e-01 | 87.1% | 65.1% |