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OQ709222.1__WGH21962.1__SEA_TROGGLEHUMPER_81__00081

Bact-Vir

OQ709222.1__WGH21962.1__SEA_TROGGLEHUMPER_81__00081

Identity

Accession:
OQ709222 ↗
Kingdom:
phage

Quality

78.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Trogglehumpervirus› Rhodococcus_phage_Trogglehumper

TaxID: 3038381

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 45-109
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wa0A02 1.10.10.1210 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH2 motif 0.58 43.0 3.65e-01 80.0% 78.8%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.53e-01 78.5% 85.7%
3bwxA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 37.0 2.47e-01 80.0% 29.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4019307 304.37.1.1 ↗ a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr 0.60 42.0 3.29e-01 73.8% 82.1%
3248674 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.58 38.0 2.66e-01 80.0% 20.0%
3228340 4075.1.1.2 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.58 36.0 3.19e-01 80.0% 42.0%
3400295 11.1.1.823 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › WSC 0.57 43.0 3.94e-01 81.5% 89.4%
5035255 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 37.0 3.39e-01 81.5% 85.3%