←Back to structures

OQ709222.1__WGH21987.1__SEA_TROGGLEHUMPER_106__00106

Bact-Vir

OQ709222.1__WGH21987.1__SEA_TROGGLEHUMPER_106__00106

Identity

Accession:
OQ709222 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Trogglehumpervirus› Rhodococcus_phage_Trogglehumper

TaxID: 3038381

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-92
PDB
Domain cluster: rep: MF959998.1__ATN93276.1__X__00038__D124-194
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7o06C01 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.72 30.0 3.00e-01 76.7% 36.3%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 32.0 3.54e-01 80.0% 52.1%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.68 43.0 4.74e-01 83.3% 80.3%
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.66 33.0 3.62e-01 98.9% 58.9%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.62 45.0 3.43e-01 75.6% 55.8%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 39.0 4.19e-01 85.6% 78.2%
5uctB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 4.04e-01 75.6% 90.0%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 37.0 4.36e-01 84.4% 100.0%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 37.0 4.24e-01 81.1% 100.0%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 38.0 3.91e-01 84.4% 77.9%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 40.0 2.77e-01 78.9% 92.5%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 37.0 4.26e-01 81.1% 100.0%
3kksB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.50 44.0 3.77e-01 100.0% 86.2%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3660755 4.8.1.21 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.71 49.0 5.30e-01 71.1% 96.0%
3703749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 44.0 5.12e-01 82.2% 89.2%
4026678 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 39.0 4.38e-01 82.2% 71.4%
3363360 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.69 50.0 5.12e-01 75.6% 83.5%
3660244 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.69 50.0 5.37e-01 75.6% 98.7%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.69 42.0 4.56e-01 83.3% 73.3%
6450 4023.1.1.2 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › Helic-prim_T7_N 0.67 33.0 3.66e-01 98.9% 58.9%
3769507 4.1.1.31 ↗ beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.66 38.0 4.29e-01 83.3% 74.3%
3741020 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 43.0 4.76e-01 80.0% 85.7%
3247995 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 37.0 4.06e-01 83.3% 70.0%
3381251 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 43.0 4.56e-01 96.7% 80.0%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.63 40.0 4.43e-01 82.2% 81.4%
3390253 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 43.0 4.63e-01 70.0% 100.0%
3899828 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 43.0 4.52e-01 70.0% 93.8%
2512682 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 37.0 4.51e-01 81.1% 96.4%
3915732 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 39.0 4.05e-01 85.6% 71.8%
4003181 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 38.0 4.50e-01 82.2% 100.0%
3246255 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 42.0 4.70e-01 96.7% 98.6%
3482676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 37.0 4.41e-01 82.2% 100.0%
3597364 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 44.0 2.87e-01 81.1% 26.9%
3900733 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 41.0 4.55e-01 91.1% 97.1%
3546309 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.57 38.0 4.11e-01 84.4% 82.7%
3604686 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.16e-01 81.1% 79.0%
3579728 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 39.0 4.40e-01 82.2% 94.3%
3841524 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 41.0 3.81e-01 88.9% 61.8%
3215500 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 32.0 3.85e-01 85.6% 90.9%
157818 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 39.0 3.94e-01 82.2% 71.4%
3194818 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 35.0 3.90e-01 84.4% 81.4%
3396594 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 33.0 3.87e-01 83.3% 90.0%
3995431 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.55 41.0 4.47e-01 83.3% 94.7%
4680114 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 37.0 4.02e-01 83.3% 86.7%
3194005 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.51 34.0 3.75e-01 84.4% 82.7%