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OQ709411.1__WFG54162.1__Mx9_p55__00055

Bact-Vir

OQ709411.1__WFG54162.1__Mx9_p55__00055

Identity

Accession:
OQ709411 ↗
Kingdom:
phage

Quality

73.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Myxoctovirus› Myxococcus_phage_Mx9

TaxID: 235265

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-88
PDB
Domain cluster: rep: MG450654.1__ATW62836.1__SCBWM1_gp152__00153__D17-96
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04542.21 best Sigma70_r2 49.3 4.70e-13 93.3% 93.0%
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sigA00 1.10.601.10 Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor 0.92 84.0 5.34e-01 100.0% 23.6%
6ldiF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 83.0 7.49e-01 100.0% 75.0%
2a6hF01 1.20.120.1810 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.91 84.0 6.06e-01 100.0% 39.9%
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.89 84.0 7.99e-01 100.0% 89.4%
5yixA00 1.10.601.10 Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor 0.89 78.0 4.96e-01 97.3% 21.6%
6pmiF01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.88 82.0 8.06e-01 100.0% 95.0%
1or7B01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.80 68.0 6.33e-01 100.0% 74.5%
2k3nA00 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.75 57.0 4.47e-01 93.3% 38.7%
4cxfA01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.74 64.0 6.08e-01 100.0% 81.6%
1jkwA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.72 57.0 5.22e-01 93.3% 65.3%
2aplA01 1.10.8.330 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like 0.71 58.0 6.00e-01 94.7% 100.0%
4nqwA01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.70 61.0 5.91e-01 100.0% 92.9%
3iieB03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.69 58.0 5.59e-01 93.3% 82.4%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.68 53.0 5.55e-01 92.0% 95.5%
3cxbA03 1.10.1740.30 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain 0.68 58.0 5.72e-01 96.0% 88.9%
2i53A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 52.0 4.63e-01 94.7% 57.7%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 58.0 4.79e-01 100.0% 92.9%
5izdA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.66 45.0 3.04e-01 70.7% 52.5%
2iu5B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 57.0 4.42e-01 100.0% 44.1%
3ljbA00 1.20.120.1240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain 0.65 57.0 4.12e-01 98.7% 51.1%
2yguC00 1.10.238.190 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.65 49.0 4.35e-01 89.3% 53.4%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 57.0 4.76e-01 100.0% 98.5%
3vkgA09 1.20.920.30 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.64 54.0 4.49e-01 97.3% 56.9%
1jkwA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 56.0 4.31e-01 100.0% 79.5%
4jz6A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.63 43.0 3.01e-01 70.7% 58.9%
3ed5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 46.0 4.53e-01 89.3% 76.2%
2wl8C00 1.20.120.900 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain 0.59 41.0 3.63e-01 72.0% 92.7%
4gr2A00 1.10.1200.210 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX 0.59 41.0 3.69e-01 74.7% 76.4%
3vayA02 1.20.120.1600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.58 44.0 4.26e-01 85.3% 71.3%
3s84A02 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.58 47.0 3.86e-01 93.3% 80.9%
3f1bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 49.0 3.82e-01 100.0% 88.0%
3ubcA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 46.0 3.86e-01 88.0% 92.4%
4ovjA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 48.0 3.48e-01 94.7% 79.1%
3k3uA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 44.0 3.69e-01 88.0% 92.7%
7w5lA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.56 47.0 3.20e-01 90.7% 35.8%
6umqA01 1.20.930.60 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.56 46.0 4.05e-01 93.3% 98.3%
5j6bD01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.55 43.0 3.03e-01 89.3% 57.8%
1c17M00 1.20.120.220 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ATP synthase, F0 complex, subunit A 0.55 45.0 3.84e-01 98.7% 66.2%
5t3wA00 1.20.120.1160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 43.0 3.50e-01 89.3% 46.0%
6a3kA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.55 45.0 3.80e-01 90.7% 60.5%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.54 43.0 3.93e-01 90.7% 69.5%
3dyjA02 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.53 47.0 3.75e-01 98.7% 94.7%
3w0oA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.53 42.0 3.00e-01 86.7% 56.9%
1t90A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 45.0 3.06e-01 97.3% 56.8%
3rh9A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 39.0 2.80e-01 89.3% 55.4%
6fjxA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 44.0 3.08e-01 100.0% 70.8%
3pqaB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 39.0 2.82e-01 89.3% 59.6%
5ekcF01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 42.0 2.96e-01 98.7% 63.1%
1zk8B02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 44.0 3.71e-01 98.7% 63.6%
7eqeB01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 46.0 3.51e-01 100.0% 93.5%
3u8vA00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.51 37.0 3.61e-01 88.0% 69.9%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3972284 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.93 85.0 7.20e-01 100.0% 62.6%
3971939 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.93 88.0 8.35e-01 98.7% 87.1%
4624390 142.1.1.1 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 0.93 85.0 7.17e-01 100.0% 62.6%
4570076 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.93 85.0 5.52e-01 100.0% 25.7%
4218058 142.1.1.1 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 0.93 85.0 5.34e-01 100.0% 22.2%
4524644 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.93 85.0 5.93e-01 100.0% 35.1%
4108773 142.1.1.1 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 0.93 85.0 5.32e-01 100.0% 22.2%
4349095 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.93 83.0 7.04e-01 98.7% 61.7%
4053923 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.93 84.0 7.38e-01 100.0% 68.6%
4631806 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.92 84.0 5.94e-01 100.0% 36.0%
4452096 142.1.1.1 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 0.92 84.0 5.97e-01 100.0% 36.9%
4513974 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.92 84.0 6.99e-01 100.0% 60.0%
3664504 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.92 84.0 6.36e-01 100.0% 45.6%
4484001 142.1.1.4 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2,Sigma70_ner 0.92 84.0 5.25e-01 100.0% 21.5%
4106336 142.1.1.4 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2,Sigma70_ner 0.92 84.0 5.32e-01 100.0% 22.9%
4225227 142.1.1.2 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2,Sigma70_ner 0.92 84.0 5.18e-01 100.0% 20.0%
3386022 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.92 84.0 5.25e-01 100.0% 21.5%
4322147 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 84.0 4.93e-01 100.0% 14.8%
3963570 142.1.1.2 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2,Sigma70_ner 0.92 84.0 5.17e-01 100.0% 20.0%
4319899 142.1.1.1 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 0.92 84.0 5.39e-01 100.0% 24.8%
4269761 142.1.1.1 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 0.92 84.0 5.98e-01 100.0% 37.9%
4258677 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.91 85.0 5.77e-01 100.0% 32.4%
None — 0.91 85.0 5.80e-01 100.0% 33.2%
3090120 142.1.1.1 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 0.91 83.0 6.93e-01 100.0% 61.0%
4056597 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.91 82.0 5.22e-01 100.0% 22.9%
4274766 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.89 82.0 7.20e-01 100.0% 69.5%
None — 0.88 83.0 6.21e-01 100.0% 45.5%
None — 0.87 81.0 5.46e-01 100.0% 30.2%
4238054 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.87 81.0 5.46e-01 100.0% 30.2%
3339567 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.87 82.0 6.00e-01 100.0% 41.7%
4032673 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 81.0 5.41e-01 100.0% 34.3%
5001330 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.77 66.0 5.72e-01 100.0% 61.7%
3284058 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.76 67.0 6.42e-01 100.0% 84.7%
3953375 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.75 66.0 5.86e-01 100.0% 74.5%
4509501 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.72 64.0 5.67e-01 100.0% 73.6%
4508577 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.71 62.0 5.36e-01 100.0% 65.8%
2389466 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.69 58.0 5.61e-01 96.0% 87.1%
3855039 3050.1.1.18 ↗ alpha bundles › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain › SCAF11-like_C 0.69 57.0 5.41e-01 100.0% 78.9%
3563012 142.1.1.22 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SCAF11-like_C 0.68 57.0 5.63e-01 100.0% 90.0%
5022284 4009.1.1.0 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.67 58.0 5.82e-01 100.0% 97.3%
3934901 3890.1.1.0 ↗ alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins 0.66 57.0 4.25e-01 100.0% 99.0%
3997160 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.63 50.0 4.60e-01 88.0% 73.0%
4239731 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.61 47.0 4.11e-01 85.3% 75.0%
3278820 191.1.1.48 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 0.60 53.0 4.59e-01 100.0% 75.0%
3172821 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.59 48.0 4.25e-01 92.0% 87.8%
3597425 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.58 52.0 4.60e-01 97.3% 75.2%
3953625 191.1.1.48 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 0.57 50.0 4.28e-01 100.0% 70.4%
3185557 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.57 47.0 3.49e-01 92.0% 58.5%
3959099 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.56 48.0 4.11e-01 100.0% 72.3%
3716237 3939.1.1.0 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.55 46.0 3.51e-01 97.3% 44.0%
5008556 3843.1.1.0 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.55 45.0 4.37e-01 96.0% 78.8%
3788025 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.55 44.0 3.38e-01 94.7% 47.0%
3188247 7524.1.1.1 ↗ a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh 0.54 47.0 2.92e-01 100.0% 45.4%
4958192 3718.1.1.34 ↗ alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › PF26161 0.52 46.0 4.58e-01 100.0% 92.5%
3420329 109.4.1.1184 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF747 0.51 39.0 2.69e-01 82.7% 49.8%
5067835 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.51 42.0 4.33e-01 100.0% 100.0%
D2 high residues 147-229
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 62.0 6.95e-01 97.6% 96.9%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 50.0 5.10e-01 77.1% 61.3%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 57.0 6.51e-01 89.2% 98.3%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 51.0 5.90e-01 85.5% 91.8%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 5.21e-01 95.2% 60.0%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 54.0 6.26e-01 90.4% 100.0%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 55.0 5.68e-01 94.0% 78.8%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 5.82e-01 89.2% 92.2%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.74 53.0 5.13e-01 90.4% 66.0%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.72 50.0 4.17e-01 84.3% 42.3%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 5.64e-01 90.4% 95.2%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 44.0 5.26e-01 79.5% 92.7%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 42.0 5.14e-01 72.3% 90.7%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.70 53.0 4.38e-01 98.8% 45.8%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 46.0 5.03e-01 84.3% 84.8%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 5.27e-01 88.0% 85.3%
3ccyA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 42.0 3.48e-01 84.3% 35.4%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.67 56.0 4.67e-01 90.4% 89.4%
2kz6A01 6.10.140.1310 Special › Helix non-globular › Helix Hairpins › 0.66 41.0 4.17e-01 85.5% 64.2%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 53.0 5.15e-01 90.4% 78.7%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 50.0 5.05e-01 83.1% 85.4%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 52.0 4.90e-01 91.6% 72.8%
3lvyE01 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.64 53.0 4.28e-01 92.8% 60.6%
3e7lA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 42.0 4.72e-01 79.5% 93.3%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.62 53.0 4.62e-01 92.8% 88.8%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.60 53.0 5.06e-01 94.0% 87.2%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.60 47.0 4.91e-01 88.0% 92.1%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 48.0 3.48e-01 92.8% 94.1%
1f5qB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 48.0 4.17e-01 95.2% 56.5%
1sqgA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.58 50.0 4.28e-01 98.8% 67.4%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.58 49.0 4.18e-01 91.6% 61.1%
4xxiA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.56 48.0 4.03e-01 96.4% 61.2%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 47.0 3.95e-01 97.6% 73.2%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.54 45.0 3.84e-01 94.0% 76.4%
5kbwB00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.53 43.0 3.52e-01 92.8% 68.4%
3rvyA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 42.0 3.91e-01 88.0% 77.6%
4dxwA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 44.0 4.06e-01 92.8% 83.9%
2l10A00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.52 40.0 3.26e-01 83.1% 86.7%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 38.0 4.17e-01 88.0% 97.0%
1bf3A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 42.0 3.05e-01 89.2% 82.1%
2b48A00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.51 35.0 3.02e-01 72.3% 75.5%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4486973 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 61.0 6.06e-01 97.6% 74.1%
3971860 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 50.0 6.21e-01 77.1% 100.0%
2330636 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 52.0 6.33e-01 84.3% 100.0%
3959252 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 57.0 6.59e-01 94.0% 100.0%
3587538 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 58.0 6.33e-01 92.8% 89.7%
4243530 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 57.0 6.34e-01 91.6% 92.3%
2464007 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 59.0 6.52e-01 92.8% 95.5%
4944726 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 52.0 6.08e-01 79.5% 91.7%
2448404 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.80 55.0 6.35e-01 90.4% 98.3%
3971665 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 56.0 5.92e-01 90.4% 80.0%
4140444 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.80 59.0 5.33e-01 96.4% 58.2%
4497189 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.80 57.0 6.39e-01 92.8% 95.4%
3971395 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 55.0 5.81e-01 90.4% 78.7%
4202221 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.80 56.0 6.17e-01 94.0% 89.7%
3959868 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.79 58.0 6.11e-01 94.0% 85.3%
3969325 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 56.0 6.11e-01 90.4% 87.1%
3973360 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 55.0 5.96e-01 90.4% 85.7%
4165188 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 58.0 5.77e-01 97.6% 75.3%
4388780 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.79 53.0 4.28e-01 89.2% 39.3%
4520564 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.78 53.0 5.44e-01 86.7% 72.5%
3961841 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.78 52.0 5.65e-01 86.7% 81.4%
1810916 101.1.1.71 ↗ alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.77 54.0 6.04e-01 88.0% 92.3%
3967026 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 56.0 5.85e-01 92.8% 82.7%
3291186 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 60.0 5.47e-01 100.0% 63.8%
3288090 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.77 54.0 5.83e-01 90.4% 85.7%
4148347 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.77 58.0 5.38e-01 95.2% 63.5%
3283863 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 58.0 5.69e-01 97.6% 73.3%
4683276 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 61.0 5.80e-01 100.0% 72.6%
3955987 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 60.0 5.76e-01 98.8% 72.6%
4876274 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.77 53.0 6.02e-01 89.2% 95.2%
3573627 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 63.0 5.44e-01 100.0% 58.4%
3284011 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 53.0 5.78e-01 90.4% 85.7%
4237551 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 59.0 5.61e-01 100.0% 71.6%
4303963 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 58.0 6.13e-01 98.8% 90.7%
3284461 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 52.0 3.65e-01 90.4% 23.6%
3284292 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 59.0 5.73e-01 96.4% 75.6%
2813289 101.1.1.71 ↗ alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.75 55.0 5.20e-01 95.2% 64.9%
3376425 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.75 66.0 6.56e-01 98.8% 92.9%
3972638 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.75 55.0 6.14e-01 97.6% 98.5%
4862439 101.1.1.71 ↗ alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.75 55.0 5.04e-01 94.0% 59.8%
4146353 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.75 54.0 5.48e-01 92.8% 77.5%
3908686 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.75 67.0 6.12e-01 96.4% 83.8%
3281471 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 58.0 5.91e-01 97.6% 85.0%
None — 0.74 56.0 5.39e-01 95.2% 69.5%
3670113 101.1.1.129 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 0.74 61.0 5.95e-01 86.7% 88.9%
3951829 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.74 56.0 5.60e-01 98.8% 77.6%
3815501 101.1.10.37 ↗ alpha arrays › HTH › HTH › Cyclin-like › PF26138 0.74 64.0 6.09e-01 91.6% 83.2%
4439853 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 59.0 6.42e-01 97.6% 100.0%
3455559 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 62.0 5.91e-01 89.2% 84.2%
3282225 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 57.0 5.83e-01 100.0% 85.0%
5023952 101.1.2.888 ↗ alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4_2 0.74 56.0 6.07e-01 95.2% 94.3%
2817645 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.74 53.0 5.46e-01 95.2% 77.5%
3908710 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 64.0 6.11e-01 92.8% 89.5%
3821461 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 63.0 6.45e-01 91.6% 97.5%
3989117 101.1.1.129 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 0.74 65.0 6.10e-01 95.2% 88.0%
4160122 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.73 57.0 4.62e-01 98.8% 45.3%
3974736 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 52.0 5.19e-01 94.0% 71.8%
4238054 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.73 53.0 3.74e-01 96.4% 25.7%
4032673 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 53.0 3.74e-01 92.8% 25.7%
3284984 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.73 52.0 3.60e-01 94.0% 24.0%
None — 0.73 53.0 3.73e-01 96.4% 25.7%
4372550 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.73 56.0 5.45e-01 97.6% 74.4%
3360897 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 66.0 4.70e-01 98.8% 62.6%
4577850 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.73 53.0 5.04e-01 97.6% 64.6%
3301179 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.72 56.0 5.90e-01 85.5% 90.7%
3444766 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.72 62.0 5.93e-01 91.6% 88.4%
3913655 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.72 63.0 6.46e-01 95.2% 100.0%
3383803 101.1.3.12 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.72 64.0 5.99e-01 96.4% 83.0%
None — 0.71 56.0 5.09e-01 95.2% 63.3%
3460321 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.71 64.0 5.11e-01 98.8% 93.1%
3452676 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.71 63.0 6.03e-01 96.4% 87.4%
3483301 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.71 58.0 4.76e-01 89.2% 72.7%
3886097 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 58.0 6.08e-01 86.7% 100.0%
3880943 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 60.0 5.74e-01 97.6% 81.1%
3324879 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.70 62.0 5.70e-01 95.2% 81.9%
3343807 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 62.0 6.20e-01 97.6% 100.0%
3279596 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.70 62.0 4.68e-01 96.4% 91.6%
3284469 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.70 56.0 5.91e-01 97.6% 94.7%
3587471 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.69 58.0 5.03e-01 94.0% 60.2%
3971149 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.69 55.0 5.64e-01 97.6% 87.5%
3289947 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.69 59.0 6.00e-01 92.8% 93.8%
3587755 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.68 58.0 4.93e-01 92.8% 57.7%
3620216 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 50.0 4.97e-01 85.5% 78.8%
3800176 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 51.0 5.09e-01 95.2% 83.5%
3972713 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.65 57.0 5.42e-01 94.0% 86.3%
4217329 4964.1.1.1 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.65 49.0 4.38e-01 85.5% 56.7%
3977260 101.1.1.39 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Phage_antitermQ 0.65 58.0 5.09e-01 97.6% 80.8%
3793393 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 48.0 4.88e-01 84.3% 82.5%
3793383 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.65 47.0 5.17e-01 85.5% 100.0%
3711347 4964.1.1.1 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.64 53.0 4.47e-01 90.4% 65.0%
3967748 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.64 56.0 5.56e-01 94.0% 100.0%
4392474 7014.1.1.1 ↗ alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.64 44.0 3.83e-01 71.1% 75.2%
3423772 4964.1.1.1 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.63 47.0 4.28e-01 80.7% 60.0%
3998880 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 49.0 4.76e-01 92.8% 76.8%
4197050 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.62 55.0 5.01e-01 94.0% 79.0%
1165469 5054.1.1.2 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.57 41.0 3.06e-01 75.9% 41.0%