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OQ717042.1__WGH24470.1__EAb13_CDS0052__00052
Bact-VirOQ717042.1__WGH24470.1__EAb13_CDS0052__00052
Identity
- Accession:
- OQ717042 ↗
- Kingdom:
- phage
Quality
72.0
mean pLDDT
Cluster
View cluster (23 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 59-72_103-167
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 33.0 | 4.00e-01 | 82.3% | 93.9% |
| 4eq8A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.55 | 46.0 | 3.84e-01 | 100.0% | 91.8% |
| 1iwlA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 38.0 | 2.96e-01 | 72.2% | 70.1% |
| 1d0nA06 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 32.0 | 2.75e-01 | 97.5% | 34.6% |
| 4bpnW02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.52 | 29.0 | 3.41e-01 | 82.3% | 80.4% |
| 1eh7A01 | 3.30.160.70 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain | 0.52 | 35.0 | 3.72e-01 | 84.8% | 78.6% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 38.0 | 3.00e-01 | 79.7% | 89.5% |
| 1e3hA01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.52 | 42.0 | 3.00e-01 | 89.9% | 99.6% |
| 8dc1A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 40.0 | 2.88e-01 | 86.1% | 96.8% |
| 5jozA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 40.0 | 2.66e-01 | 82.3% | 40.0% |
| 3kf3A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.50 | 42.0 | 3.35e-01 | 97.5% | 81.9% |
| 3f1sA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.50 | 44.0 | 3.62e-01 | 100.0% | 61.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2491409 | 219.1.1.117 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF30660 | 0.58 | 48.0 | 3.68e-01 | 89.9% | 71.5% |
| 3980140 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.57 | 46.0 | 3.98e-01 | 93.7% | 93.3% |
| 5022923 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.55 | 37.0 | 3.68e-01 | 70.9% | 88.2% |
| 3601003 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 43.0 | 2.67e-01 | 87.3% | 88.9% |
| 3933902 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 41.0 | 2.50e-01 | 84.8% | 28.8% |
| 4347162 | 4252.1.1.13 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › PF27123 | 0.52 | 42.0 | 3.80e-01 | 89.9% | 97.3% |
| 4479457 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.51 | 43.0 | 3.47e-01 | 97.5% | 81.1% |
| 3599391 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.51 | 37.0 | 2.74e-01 | 77.2% | 38.4% |
| 3934093 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 40.0 | 2.54e-01 | 87.3% | 52.0% |
| 4361528 | 5.1.4.668 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CGLA | 0.50 | 39.0 | 2.54e-01 | 86.1% | 83.8% |
| 4342673 | 212.1.1.18 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Lon_C | 0.50 | 36.0 | 3.16e-01 | 75.9% | 86.7% |
D2
medium
residues 73-102_168-248
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wnzA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.59 | 48.0 | 4.39e-01 | 92.8% | 68.1% |
| 1yaxB00 | 3.30.450.140 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PhoQ sensor domain | 0.53 | 36.0 | 3.41e-01 | 97.3% | 58.2% |
| 2v8qB00 | 6.20.250.60 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.51 | 24.0 | 2.95e-01 | 89.2% | 68.5% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 41.0 | 4.27e-01 | 91.9% | 93.2% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 43.0 | 4.32e-01 | 92.8% | 91.8% |
| 1lqvB00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.50 | 39.0 | 3.41e-01 | 83.8% | 64.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3214289 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.68 | 37.0 | 3.70e-01 | 98.2% | 51.3% |
| 3925865 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.65 | 36.0 | 3.53e-01 | 100.0% | 50.0% |
| 3503098 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.63 | 36.0 | 3.84e-01 | 100.0% | 64.2% |
| 3734729 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.62 | 47.0 | 3.69e-01 | 92.8% | 36.7% |
| 3275592 | 206.1.3.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp | 0.61 | 47.0 | 3.71e-01 | 92.8% | 39.1% |
| 3402775 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.55 | 40.0 | 4.20e-01 | 96.4% | 82.5% |
| 4264144 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.52 | 44.0 | 4.57e-01 | 94.6% | 96.2% |
| 4856794 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.52 | 30.0 | 3.51e-01 | 93.7% | 81.8% |
| 3248460 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 30.0 | 2.11e-01 | 87.4% | 16.6% |
| 3969662 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.51 | 42.0 | 2.93e-01 | 91.9% | 99.0% |
| 3236717 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 35.0 | 3.54e-01 | 92.8% | 72.7% |
| 3188394 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.50 | 30.0 | 2.96e-01 | 90.1% | 54.2% |
| 5056431 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 32.0 | 3.14e-01 | 92.8% | 58.4% |