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OQ718882.1__WHM52822.1__IOBOPIKK_00015__00015

Bact-Vir

OQ718882.1__WHM52822.1__IOBOPIKK_00015__00015

Identity

Accession:
OQ718882 ↗
Kingdom:
phage

Quality

88.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-46
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26207.1 best Phage_phiTE_015 52.2 8.50e-14 100.0% 52.5%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ip4C01 1.10.20.60 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Glu-tRNAGln amidotransferase C subunit, N-terminal domain 0.62 44.0 4.41e-01 100.0% 75.0%
3kfuG01 1.10.20.60 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Glu-tRNAGln amidotransferase C subunit, N-terminal domain 0.60 45.0 4.61e-01 100.0% 94.7%
3gwaA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.59 42.0 2.86e-01 100.0% 19.9%
7p0jA02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.59 45.0 3.63e-01 87.8% 63.5%
1ze0A02 1.10.4070.10 Mainly Alpha › Orthogonal Bundle › putative redox-enzyme maturation protein fold › putative redox-enzyme maturation protein domain 0.58 49.0 4.05e-01 100.0% 61.5%
1v32A00 1.10.245.10 Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain 0.56 47.0 3.57e-01 97.6% 72.3%
2py5A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 47.0 3.09e-01 100.0% 27.2%
4at7B02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.55 48.0 3.13e-01 100.0% 63.9%
1t0fA01 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.55 41.0 3.00e-01 100.0% 45.1%
7wzwF01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.54 46.0 3.02e-01 100.0% 36.5%
3rheA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 43.0 3.29e-01 100.0% 42.1%
4qozB02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 46.0 2.89e-01 100.0% 22.1%
3fk5A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.53 42.0 3.07e-01 100.0% 63.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3802814 2488.1.1.18 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › DTW 0.75 63.0 3.74e-01 100.0% 13.5%
4027085 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.69 56.0 4.90e-01 100.0% 60.3%
4952986 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.56 44.0 3.91e-01 100.0% 80.0%
4338062 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.54 44.0 2.54e-01 100.0% 26.5%