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OQ729742.1__WJJ57736.1__MidiMira_09__00009

Bact-Vir

OQ729742.1__WJJ57736.1__MidiMira_09__00009

Identity

Accession:
OQ729742 ↗
Kingdom:
phage

Quality

80.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-71
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hdoA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.74 62.0 5.02e-01 91.3% 70.0%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.74 47.0 2.92e-01 81.2% 12.1%
3khnB00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.72 50.0 3.81e-01 72.5% 98.7%
2dr1A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.70 57.0 4.55e-01 88.4% 71.9%
2ehbD00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.69 51.0 4.16e-01 78.3% 63.5%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 41.0 3.09e-01 85.5% 25.0%
3p1tA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.68 61.0 4.99e-01 98.6% 82.0%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 43.0 2.90e-01 87.0% 18.8%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.67 55.0 4.84e-01 92.8% 100.0%
3kkiA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.66 52.0 4.04e-01 85.5% 60.4%
2joiA00 3.30.310.190 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.66 46.0 4.12e-01 72.5% 76.0%
1o4sA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.63 55.0 4.30e-01 98.6% 70.9%
5ib9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.63 49.0 3.26e-01 84.1% 80.7%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.62 42.0 3.52e-01 75.4% 40.8%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 46.0 4.28e-01 79.7% 69.4%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.61 43.0 3.18e-01 73.9% 34.0%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.61 43.0 4.60e-01 73.9% 98.3%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.61 50.0 4.38e-01 94.2% 98.2%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 42.0 3.20e-01 72.5% 79.5%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 36.0 2.72e-01 79.7% 23.8%
2w18A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 42.0 2.76e-01 73.9% 37.3%
2v3aA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 41.0 3.25e-01 71.0% 88.1%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 46.0 3.88e-01 81.2% 55.0%
3h27A00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.59 41.0 2.51e-01 72.5% 26.3%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 4.29e-01 82.6% 96.3%
2cxiA03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.58 42.0 4.22e-01 76.8% 74.3%
3noyB02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.58 41.0 3.80e-01 76.8% 77.9%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.58 39.0 3.77e-01 71.0% 96.2%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.57 41.0 4.05e-01 75.4% 87.5%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 42.0 3.57e-01 81.2% 57.1%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 41.0 3.86e-01 78.3% 84.9%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.56 41.0 3.37e-01 78.3% 82.5%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.56 40.0 3.92e-01 78.3% 88.3%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.56 41.0 3.70e-01 79.7% 99.0%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.55 40.0 3.91e-01 78.3% 91.1%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 39.0 3.16e-01 73.9% 88.6%
1a0rB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 44.0 2.78e-01 87.0% 75.8%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 38.0 3.10e-01 73.9% 87.3%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 40.0 4.05e-01 79.7% 88.6%
2wmmA02 3.30.70.3500 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MukB, hinge domain 0.54 37.0 3.21e-01 72.5% 75.2%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 38.0 3.87e-01 75.4% 78.3%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 38.0 3.13e-01 75.4% 89.1%
4dezA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.54 39.0 3.46e-01 79.7% 53.5%
1c1fA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 36.0 2.95e-01 71.0% 86.7%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 37.0 2.83e-01 72.5% 89.8%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.53 39.0 3.90e-01 76.8% 88.4%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 37.0 2.98e-01 73.9% 84.7%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 38.0 2.44e-01 76.8% 96.1%
4b1bA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 45.0 2.74e-01 94.2% 57.0%
3wpwA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.51 37.0 2.84e-01 75.4% 44.3%
4flnA02 3.20.190.20 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › 0.51 37.0 3.00e-01 81.2% 63.2%
1e1hA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.51 41.0 2.83e-01 87.0% 59.6%
4i8iA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.51 43.0 2.98e-01 97.1% 56.4%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3935332 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.75 49.0 3.86e-01 78.3% 35.4%
4410759 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.73 47.0 3.93e-01 79.7% 40.0%
4025349 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.73 50.0 4.04e-01 72.5% 41.5%
3992641 331.4.1.9 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.72 50.0 5.06e-01 73.9% 94.3%
4479376 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.72 62.0 5.28e-01 98.6% 98.3%
3274295 3862.1.1.5 extended segments › Envelope small membrane protein › Envelope small membrane protein › Envelope small membrane protein › RENR_N 0.71 55.0 3.36e-01 84.1% 27.9%
3476001 331.4.1.1 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.71 52.0 4.72e-01 78.3% 86.0%
4218376 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.69 55.0 4.91e-01 87.0% 100.0%
3885751 331.4.1.1 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.69 51.0 4.63e-01 79.7% 84.2%
4493573 4964.1.1.2 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.67 48.0 3.37e-01 73.9% 28.0%
3965099 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.67 56.0 4.84e-01 91.3% 100.0%
223484 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.67 55.0 4.84e-01 92.8% 100.0%
5014724 295.1.1.51 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.67 47.0 4.18e-01 73.9% 51.0%
4073557 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.66 55.0 4.87e-01 91.3% 99.0%
3733997 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.66 55.0 4.54e-01 91.3% 99.2%
5060418 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.66 45.0 3.72e-01 71.0% 45.0%
4515677 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.65 54.0 4.60e-01 94.2% 94.7%
3711594 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.64 44.0 3.52e-01 71.0% 36.4%
4928161 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.64 51.0 4.54e-01 87.0% 80.0%
4952130 3714.1.1.1 a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical 0.64 54.0 3.73e-01 94.2% 27.8%
5009925 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.64 57.0 3.72e-01 100.0% 70.5%
4302852 331.22.1.2 a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 0.64 50.0 3.76e-01 88.4% 49.7%
3786162 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 49.0 4.35e-01 81.2% 63.2%
4143716 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.62 51.0 4.42e-01 91.3% 98.2%
3806737 5057.1.1.0 alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.62 49.0 3.86e-01 84.1% 46.4%
5022991 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.62 44.0 4.12e-01 76.8% 88.9%
7384 219.1.1.21 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 0.61 43.0 3.18e-01 73.9% 34.0%
3510676 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 55.0 4.93e-01 100.0% 83.2%
3285626 4090.1.1.0 a+b two layers › BH3703-like › BH3703-like › BH3703-like 0.60 53.0 4.02e-01 94.2% 47.7%
5017022 331.1.1.27 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CBS 0.60 49.0 3.36e-01 94.2% 53.7%
4463557 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 46.0 4.12e-01 81.2% 77.9%
4097938 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.60 50.0 4.28e-01 91.3% 90.0%
3662319 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 46.0 4.39e-01 84.1% 92.5%
3972594 3714.1.1.1 a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical 0.59 54.0 3.59e-01 98.6% 28.6%
4665982 296.1.1.0 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 0.59 42.0 3.83e-01 76.8% 79.0%
3607693 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 42.0 2.71e-01 75.4% 24.3%
4479970 6020.1.1.1 a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.58 39.0 3.26e-01 71.0% 39.3%
3604573 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.58 42.0 2.51e-01 82.6% 8.6%
5023356 3740.1.1.4 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.57 43.0 2.74e-01 81.2% 62.5%
3323984 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.57 39.0 2.89e-01 71.0% 40.0%
4998989 3740.1.1.4 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.57 40.0 2.68e-01 72.5% 31.3%
3937216 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.57 45.0 3.66e-01 85.5% 56.2%
4427813 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.57 45.0 4.05e-01 92.8% 99.0%
3392529 719.2.1.1 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.57 40.0 3.72e-01 75.4% 83.3%
3394225 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.56 47.0 3.86e-01 88.4% 80.9%
3622389 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 39.0 4.06e-01 75.4% 90.8%
3228787 4161.1.1.0 beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like 0.55 40.0 2.65e-01 76.8% 33.9%
4336238 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.55 41.0 3.69e-01 82.6% 91.0%
3803377 7.1.1.7 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 0.55 38.0 3.21e-01 75.4% 62.3%
2841859 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 4.26e-01 85.5% 83.8%
3628286 223.2.1.33 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.54 39.0 3.17e-01 76.8% 44.6%
3808127 7.1.1.7 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 0.54 38.0 3.12e-01 75.4% 63.7%
3584039 5.1.5.89 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 0.54 40.0 2.55e-01 82.6% 29.1%
4118349 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.52 40.0 3.31e-01 85.5% 90.4%
3535695 1021.1.1.2 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD 0.51 39.0 3.52e-01 81.2% 58.9%
4231677 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.51 37.0 3.04e-01 81.2% 93.8%