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OQ730212.1__WGV35638.1__EPabB_1__00001

Bact-Vir

OQ730212.1__WGV35638.1__EPabB_1__00001

Identity

Accession:
OQ730212 ↗
Kingdom:
phage

Quality

83.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-59
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 44.0 3.80e-01 81.0% 39.6%
2z0qA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 47.0 3.65e-01 79.3% 32.8%
3kstA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 52.0 3.31e-01 91.4% 16.8%
1wquA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 52.0 4.19e-01 86.2% 59.6%
3uiuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 52.0 4.43e-01 89.7% 89.7%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 52.0 3.23e-01 87.9% 24.9%
2dx0A00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 49.0 3.90e-01 82.8% 60.7%
1milA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 52.0 4.27e-01 87.9% 68.3%
2bbuA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 46.0 3.48e-01 81.0% 71.2%
2crhA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 50.0 4.19e-01 87.9% 70.6%
1v73A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.63 47.0 2.89e-01 89.7% 13.9%
2ablA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 49.0 4.13e-01 86.2% 66.0%
3fxzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 50.0 4.26e-01 91.4% 82.7%
2oq1A03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 50.0 4.19e-01 89.7% 68.0%
3aqoA02 3.30.1360.200 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.62 48.0 3.61e-01 84.5% 93.6%
1m61A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 44.0 3.74e-01 86.2% 44.2%
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.61 45.0 3.74e-01 79.3% 80.2%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.61 52.0 4.56e-01 94.8% 62.5%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.61 44.0 4.53e-01 87.9% 83.3%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 47.0 3.67e-01 87.9% 45.3%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 51.0 3.77e-01 100.0% 58.7%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 50.0 3.70e-01 94.8% 51.9%
3vhxF00 2.60.40.4330 Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain 0.59 40.0 3.39e-01 70.7% 73.5%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 49.0 3.85e-01 94.8% 46.1%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.59 47.0 4.48e-01 91.4% 81.7%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 50.0 3.84e-01 100.0% 76.6%
3f8uB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 3.64e-01 87.9% 99.2%
2c9wA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 47.0 3.80e-01 89.7% 64.6%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.58 48.0 4.10e-01 100.0% 85.8%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.58 46.0 4.02e-01 89.7% 78.0%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.57 47.0 3.67e-01 100.0% 57.0%
2oolA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 44.0 3.77e-01 89.7% 68.2%
2dx0B01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 46.0 4.24e-01 89.7% 78.7%
1wibA00 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.57 39.0 3.41e-01 72.4% 79.3%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 41.0 3.75e-01 87.9% 57.5%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.64e-01 96.6% 63.4%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 45.0 4.51e-01 87.9% 98.3%
2z1cB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 41.0 3.87e-01 91.4% 63.5%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.55 45.0 3.36e-01 91.4% 43.1%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 42.0 3.85e-01 84.5% 98.7%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.55 44.0 3.99e-01 98.3% 91.1%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 41.0 3.60e-01 87.9% 51.0%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 42.0 3.86e-01 91.4% 80.5%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.54 43.0 3.81e-01 100.0% 69.0%
2l4vA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.29e-01 91.4% 88.1%
2leqA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 44.0 3.44e-01 100.0% 61.6%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 3.73e-01 91.4% 79.7%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.19e-01 100.0% 59.0%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.23e-01 100.0% 53.7%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 41.0 2.83e-01 96.6% 87.8%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.36e-01 100.0% 68.1%
5wt7A00 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.51 41.0 3.15e-01 91.4% 46.4%
4ihzA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 41.0 3.18e-01 100.0% 88.4%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3283644 301.8.1.1 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.68 55.0 4.48e-01 89.7% 90.9%
3611447 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 51.0 3.01e-01 82.8% 10.3%
3545796 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 54.0 4.30e-01 87.9% 68.7%
3557314 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.66 53.0 4.05e-01 87.9% 58.5%
3250914 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.66 52.0 3.19e-01 87.9% 27.1%
3411613 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 53.0 3.26e-01 91.4% 30.4%
3801304 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.66 52.0 3.92e-01 86.2% 47.1%
3498241 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 52.0 3.80e-01 89.7% 52.8%
3496362 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.64 53.0 3.75e-01 89.7% 50.6%
3390566 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.64 54.0 4.52e-01 94.8% 90.0%
3213942 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 52.0 4.20e-01 89.7% 68.2%
3868838 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.63 51.0 3.85e-01 94.8% 43.1%
3462090 5.1.3.144 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.63 48.0 3.03e-01 87.9% 14.4%
3542444 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.62 50.0 3.71e-01 89.7% 47.1%
3926352 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.62 50.0 4.02e-01 89.7% 65.2%
3187236 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.62 47.0 2.91e-01 91.4% 13.7%
3220701 206.1.1.55 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL 0.62 47.0 3.02e-01 89.7% 28.7%
3616923 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.62 50.0 4.03e-01 93.1% 57.5%
3468658 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 47.0 3.00e-01 89.7% 16.0%
4216985 331.19.1.2 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N 0.61 52.0 4.68e-01 100.0% 87.1%
852 9.1.1.29 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BFA1_C 0.61 47.0 3.67e-01 87.9% 45.3%
3397985 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 51.0 3.96e-01 94.8% 73.8%
3735796 206.1.1.48 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › FTA2 0.60 47.0 3.17e-01 84.5% 47.6%
3246120 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 50.0 3.63e-01 100.0% 34.9%
4179811 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.60 38.0 4.38e-01 77.6% 95.0%
3745663 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.60 50.0 3.62e-01 94.8% 48.0%
3955267 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.60 44.0 3.48e-01 82.8% 44.0%
3492201 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.59 42.0 3.97e-01 87.9% 60.0%
3256082 220.1.1.153 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TRF2_HOY1 0.59 50.0 3.88e-01 100.0% 69.0%
3937758 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.59 48.0 3.88e-01 89.7% 61.9%
4952930 2.21.1.0 beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.59 55.0 4.74e-01 100.0% 92.9%
3964837 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.59 47.0 4.34e-01 98.3% 69.3%
3766764 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.58 44.0 2.93e-01 89.7% 20.0%
3479716 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.57 45.0 4.08e-01 96.6% 62.4%
4876264 275.1.1.4 a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_5 0.57 47.0 3.06e-01 96.6% 19.6%
3594326 241.10.1.0 a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain 0.57 44.0 3.99e-01 86.2% 68.8%
4028525 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.57 44.0 3.15e-01 87.9% 85.3%
5012820 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 46.0 3.91e-01 89.7% 70.5%
3209694 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 45.0 3.90e-01 94.8% 64.0%
4380184 9.11.1.1 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC 0.55 44.0 3.95e-01 94.8% 86.5%
3491449 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.55 46.0 3.27e-01 94.8% 73.7%
5059800 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.55 42.0 3.96e-01 82.8% 92.9%
3960559 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 45.0 3.67e-01 96.6% 47.2%
3626785 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.54 41.0 3.03e-01 87.9% 85.6%
3965157 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.53 46.0 3.23e-01 100.0% 46.8%
3509892 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.53 39.0 2.94e-01 86.2% 29.1%
4941125 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 43.0 3.64e-01 100.0% 79.1%
4271291 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 44.0 4.20e-01 96.6% 84.3%
4368601 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.52 41.0 3.59e-01 94.8% 72.0%
3616220 77.3.1.3 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.51 37.0 2.85e-01 82.8% 44.4%
3246329 59.1.2.0 beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C 0.51 39.0 3.74e-01 91.4% 91.4%
3303919 59.1.1.16 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › PF30948 0.50 40.0 3.50e-01 91.4% 80.0%