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OQ784832.1__WID10834.1__SEA_MULCHROOM_10__00010

Bact-Vir

OQ784832.1__WID10834.1__SEA_MULCHROOM_10__00010

Identity

Accession:
OQ784832 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 13-75
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ke6A02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.87 80.0 6.22e-01 100.0% 52.8%
1l0oA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.87 80.0 6.02e-01 100.0% 47.5%
2q0yA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.73 60.0 4.65e-01 90.5% 88.4%
3fixA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.68 54.0 4.04e-01 88.9% 88.5%
4e2aA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 52.0 3.92e-01 90.5% 74.7%
5mmjb02 1.10.287.610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.65 36.0 3.95e-01 77.8% 65.4%
8igrI01 2.40.270.10 Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 0.64 47.0 3.52e-01 82.5% 40.3%
3ziuA01 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.63 46.0 3.16e-01 79.4% 61.3%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.62 45.0 4.38e-01 79.4% 77.5%
3q15B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 42.0 2.68e-01 73.0% 15.7%
2hqyA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 50.0 3.70e-01 92.1% 70.8%
1tiqB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 48.0 3.61e-01 92.1% 70.8%
4fjqA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.59 46.0 2.90e-01 85.7% 66.8%
2nrkA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.56 44.0 3.31e-01 88.9% 58.2%
1iq0A03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.55 41.0 3.42e-01 81.0% 81.0%
1e52A00 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.55 37.0 3.90e-01 74.6% 78.6%
4oa3A00 3.10.310.50 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.55 45.0 3.66e-01 100.0% 66.0%
3gfaA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.52 47.0 3.29e-01 100.0% 39.8%
4mmhA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.52 42.0 2.68e-01 92.1% 41.9%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3955635 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.92 84.0 6.49e-01 100.0% 48.8%
3961336 3781.1.1.0 a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain 0.83 75.0 6.64e-01 100.0% 72.2%
4610032 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.80 71.0 5.08e-01 100.0% 48.9%
3284404 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.70 58.0 4.04e-01 92.1% 70.7%
3678598 2003.1.5.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 0.69 56.0 3.23e-01 90.5% 15.7%
3607058 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.66 55.0 4.05e-01 92.1% 81.8%
3330365 2003.1.5.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 0.66 53.0 3.99e-01 90.5% 85.9%
None 0.65 55.0 3.98e-01 92.1% 72.4%
None 0.65 53.0 4.00e-01 92.1% 72.5%
3739438 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.65 54.0 3.96e-01 92.1% 70.8%
5053485 213.1.1.21 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C 0.62 52.0 3.77e-01 92.1% 68.4%
3998011 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.62 52.0 3.89e-01 92.1% 72.9%
5021962 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.62 51.0 3.79e-01 92.1% 70.3%
3981151 2003.1.5.21 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CMAS 0.61 47.0 3.22e-01 87.3% 96.8%
11109 213.1.1.21 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C 0.61 50.0 3.73e-01 92.1% 72.6%
3911474 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.60 45.0 3.09e-01 87.3% 89.6%
3365482 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.60 46.0 3.50e-01 88.9% 95.3%
None 0.56 41.0 2.72e-01 82.5% 94.2%
4302386 140.1.1.11 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 0.55 39.0 2.96e-01 76.2% 86.4%
4022495 312.1.1.7 a+b three layers › HIT-like › HIT-related › HIT-related › ATP_transf 0.52 45.0 3.36e-01 100.0% 79.4%
D2 medium residues 76-144
PDB
Domain cluster: representative
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 51.0 4.72e-01 97.1% 62.9%
1uw4A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.66 48.0 4.45e-01 100.0% 59.3%
1tz0B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 52.0 4.63e-01 97.1% 62.9%
3c0wA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.62 48.0 4.06e-01 100.0% 49.2%
1ok8A03 3.30.387.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 3 › Viral Envelope Glycoprotein, domain 3 0.62 48.0 4.59e-01 97.1% 71.6%
4uxuA00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.62 56.0 3.94e-01 100.0% 37.6%
3ue2A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.62 50.0 4.66e-01 100.0% 69.3%
1sqeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 48.0 4.18e-01 97.1% 56.4%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 54.0 4.70e-01 98.6% 94.4%
1o51A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 50.0 4.60e-01 97.1% 68.5%
2bj0A00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.62 55.0 3.94e-01 100.0% 38.9%
2fgeA04 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.61 54.0 3.71e-01 100.0% 33.6%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.61 46.0 3.70e-01 97.1% 39.4%
2x1wL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 47.0 4.10e-01 95.7% 54.3%
6y1zA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.61 55.0 3.85e-01 100.0% 38.7%
3e23A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 54.0 3.89e-01 100.0% 84.3%
6mroA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 52.0 3.81e-01 97.1% 48.5%
1j2vA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 51.0 4.49e-01 92.8% 95.0%
1bdfA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.61 52.0 4.53e-01 100.0% 63.2%
4noiA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.60 51.0 4.54e-01 100.0% 65.0%
4qclA02 3.30.70.2820 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 49.0 4.19e-01 89.9% 69.4%
2gx8A02 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 51.0 4.55e-01 95.7% 94.9%
3bdeB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 49.0 4.35e-01 95.7% 62.6%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.59 49.0 4.44e-01 95.7% 66.7%
2ftrA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 51.0 4.46e-01 100.0% 64.1%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.59 44.0 3.62e-01 95.7% 41.6%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 49.0 4.38e-01 92.8% 97.0%
3o4fH02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 52.0 3.64e-01 98.6% 34.9%
3c6kB03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 51.0 3.78e-01 100.0% 49.2%
3bf4A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 48.0 4.31e-01 92.8% 66.7%
3qv2A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 3.64e-01 98.6% 85.0%
4l3tA04 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.58 50.0 3.42e-01 100.0% 32.1%
4ozjA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 52.0 4.52e-01 100.0% 95.2%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.58 47.0 4.25e-01 92.8% 70.0%
2c7rA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 3.61e-01 100.0% 77.7%
5ajiB03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 48.0 4.36e-01 100.0% 68.4%
2bg9C01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.57 50.0 3.61e-01 100.0% 35.4%
1vzyA01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.57 50.0 3.49e-01 100.0% 73.9%
1we8A01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.57 44.0 4.15e-01 95.7% 69.0%
2p35A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 50.0 3.72e-01 98.6% 87.9%
4gafB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 4.02e-01 100.0% 57.3%
1hw7A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.57 49.0 3.72e-01 100.0% 95.4%
3iabB01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.57 51.0 4.50e-01 100.0% 90.9%
2cq4A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 41.0 3.82e-01 100.0% 58.8%
2p8jA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 48.0 3.52e-01 100.0% 91.7%
1q2lA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.56 48.0 3.41e-01 100.0% 34.2%
5h02A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 50.0 3.67e-01 98.6% 48.3%
2qndA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.56 45.0 4.31e-01 94.2% 76.2%
4z9eA00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.56 44.0 4.19e-01 91.3% 71.8%
3m86A00 2.60.40.2020 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 49.0 4.21e-01 100.0% 69.4%
3cueB00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.56 49.0 3.72e-01 100.0% 41.3%
1v8cA02 3.30.1370.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain 0.55 45.0 4.36e-01 94.2% 81.2%
3so5A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 3.95e-01 100.0% 59.0%
6ruiB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.55 47.0 3.97e-01 100.0% 91.3%
3tebB00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.55 46.0 3.12e-01 94.2% 100.0%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.55 48.0 4.00e-01 100.0% 82.3%
2i6gB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 46.0 3.44e-01 100.0% 86.9%
3l7xA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.54 44.0 3.45e-01 91.3% 47.8%
2nyiA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 40.0 3.78e-01 95.7% 63.3%
1vmbA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.54 46.0 4.01e-01 95.7% 62.6%
5uayA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.54 47.0 4.43e-01 97.1% 89.2%
3tf8B00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.54 41.0 3.09e-01 98.6% 31.5%
3lccA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 46.0 3.35e-01 100.0% 44.0%
2c5dC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 3.98e-01 100.0% 61.5%
3sm3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 46.0 3.34e-01 100.0% 94.8%
3htxD03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 47.0 3.29e-01 98.6% 84.2%
1emsA02 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.53 43.0 3.57e-01 91.3% 57.7%
2rhqB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.53 40.0 3.89e-01 95.7% 72.3%
4fprB00 3.30.70.2910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 45.0 3.67e-01 95.7% 59.4%
1zxqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.22e-01 100.0% 54.1%
4xrpC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 45.0 3.36e-01 95.7% 90.9%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 45.0 3.74e-01 100.0% 71.1%
2wyhA05 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 3.65e-01 100.0% 68.7%
2wnyA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.52 37.0 3.08e-01 94.2% 39.4%
2nraC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 46.0 4.02e-01 100.0% 82.4%
3o3uN03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 3.78e-01 100.0% 60.4%
5svgC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 40.0 3.44e-01 89.9% 95.0%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3282598 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.72 59.0 4.82e-01 100.0% 48.8%
3788989 304.117.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.69 52.0 4.95e-01 97.1% 68.8%
4243267 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.69 53.0 3.65e-01 100.0% 23.2%
4954449 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.67 56.0 4.97e-01 100.0% 63.6%
4486890 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.67 52.0 4.49e-01 100.0% 53.6%
4075546 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.67 50.0 4.62e-01 100.0% 62.2%
3805857 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.66 59.0 4.08e-01 100.0% 70.6%
3999424 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.66 52.0 4.49e-01 97.1% 54.5%
3740046 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.65 50.0 4.09e-01 95.7% 44.6%
5014488 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 52.0 4.22e-01 97.1% 46.7%
3964912 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 44.0 4.36e-01 95.7% 68.9%
4665957 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.63 51.0 4.49e-01 100.0% 60.0%
5047334 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.63 47.0 4.23e-01 97.1% 57.9%
3510174 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.62 56.0 3.96e-01 100.0% 36.7%
4547549 304.18.1.1 a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.62 51.0 4.45e-01 97.1% 59.6%
3602033 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 42.0 2.57e-01 71.0% 46.2%
4683054 309.1.1.16 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C 0.61 54.0 3.02e-01 100.0% 8.8%
3613196 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.61 53.0 3.95e-01 97.1% 38.9%
4179054 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.61 48.0 3.82e-01 100.0% 42.1%
3943661 304.5.1.13 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF3574 0.61 52.0 4.60e-01 94.2% 69.0%
4028991 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.61 54.0 3.37e-01 100.0% 21.3%
169085 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.61 54.0 3.90e-01 100.0% 83.2%
4976892 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.61 54.0 3.83e-01 100.0% 53.4%
3523036 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.60 53.0 4.57e-01 100.0% 61.8%
3728277 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.60 51.0 4.41e-01 95.7% 62.4%
4672032 848.1.1.1 a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 0.59 51.0 3.57e-01 100.0% 72.2%
3744219 4146.1.1.0 alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like 0.59 52.0 4.59e-01 100.0% 68.0%
4397160 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.59 51.0 4.26e-01 100.0% 55.2%
5049353 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.59 47.0 3.92e-01 100.0% 49.6%
5029814 328.1.1.1 a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.58 50.0 5.13e-01 97.1% 96.9%
4028720 273.1.1.2 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CEP76_C 0.58 51.0 4.19e-01 100.0% 54.6%
3725630 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.58 47.0 4.55e-01 95.7% 77.5%
4614530 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.58 50.0 4.25e-01 100.0% 59.2%
4591683 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.58 49.0 4.49e-01 100.0% 71.6%
3996241 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.58 46.0 3.77e-01 91.3% 72.1%
4121485 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.58 50.0 4.03e-01 100.0% 61.4%
4464468 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.57 50.0 4.33e-01 100.0% 63.6%
3829654 387.1.5.7 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SCRL 0.57 44.0 4.70e-01 94.2% 100.0%
4979177 328.1.1.1 a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.57 53.0 4.64e-01 100.0% 86.0%
4933494 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.57 44.0 4.04e-01 98.6% 63.2%
3974775 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.57 43.0 3.93e-01 95.7% 61.1%
3690383 304.4.1.58 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dehydratase_hem 0.57 49.0 4.29e-01 97.1% 64.8%
4948199 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.57 52.0 4.67e-01 100.0% 90.5%
4345301 1.1.5.44 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head 0.57 42.0 3.29e-01 95.7% 35.0%
4319533 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.57 48.0 3.93e-01 100.0% 52.9%
4028502 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.56 49.0 4.15e-01 100.0% 61.7%
5069230 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.56 49.0 3.56e-01 100.0% 86.8%
4182228 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.56 49.0 4.62e-01 100.0% 82.4%
3932888 304.8.1.71 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7636 0.56 44.0 3.93e-01 94.2% 60.0%
4934000 304.51.1.7 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 0.56 46.0 3.64e-01 91.3% 93.8%
4943826 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.56 44.0 3.29e-01 92.8% 33.5%
4991896 328.1.1.1 a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.56 51.0 4.72e-01 100.0% 98.9%
3692300 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.56 43.0 3.95e-01 100.0% 63.2%
5065326 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.55 51.0 4.53e-01 100.0% 90.5%
3998603 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.55 46.0 4.16e-01 100.0% 67.8%
5079175 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.55 48.0 3.38e-01 100.0% 37.4%
4403450 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.55 46.0 3.96e-01 100.0% 56.7%
4457840 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.55 47.0 4.43e-01 100.0% 78.8%
4019555 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.55 45.0 3.93e-01 98.6% 59.1%
4678751 3019.1.1.1 beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN 0.55 45.0 3.71e-01 92.8% 67.7%
3915011 389.1.1.7 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA 0.55 42.0 3.35e-01 97.1% 38.1%
3632109 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 42.0 3.70e-01 98.6% 54.5%
3492633 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.54 45.0 3.93e-01 91.3% 60.0%
4928686 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 45.0 4.14e-01 97.1% 71.1%
4934212 328.1.1.1 a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.54 47.0 4.26e-01 100.0% 98.9%
4008366 812.1.1.0 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain 0.54 45.0 4.24e-01 98.6% 76.7%
3929967 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.54 46.0 3.84e-01 98.6% 53.1%
3814973 4081.1.1.10 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Gpi16 0.54 46.0 3.50e-01 100.0% 53.0%
3285005 304.45.1.1 a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK 0.54 43.0 3.38e-01 94.2% 61.2%
3823835 304.4.1.78 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF7036 0.53 44.0 3.90e-01 94.2% 63.8%
3532103 273.1.1.2 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CEP76_C 0.53 44.0 3.67e-01 100.0% 54.3%
3649918 11.1.1.389 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C 0.53 46.0 3.21e-01 100.0% 30.0%
3600809 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.52 45.0 3.43e-01 97.1% 57.6%
286927 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.52 45.0 3.69e-01 100.0% 67.9%
5026790 328.1.1.1 a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.52 45.0 4.05e-01 100.0% 91.0%
5044376 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.52 43.0 2.89e-01 100.0% 26.2%
3246557 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.51 46.0 3.92e-01 100.0% 61.7%
3495236 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.51 42.0 3.90e-01 94.2% 73.3%
3942433 256.1.1.4 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › DUF4177 0.51 40.0 4.06e-01 89.9% 100.0%
3822140 387.1.5.7 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SCRL 0.51 42.0 4.25e-01 94.2% 97.1%
3177336 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.50 42.0 3.76e-01 100.0% 63.8%
5014544 304.8.1.82 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 0.50 42.0 3.44e-01 100.0% 90.3%