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OQ789245.1__WIL01308.1__CRP6_000028__00028

Bact-Vir

OQ789245.1__WIL01308.1__CRP6_000028__00028

Identity

Accession:
OQ789245 ↗
Kingdom:
phage

Quality

80.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-75
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.69 50.0 3.98e-01 77.1% 63.1%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.67 49.0 3.92e-01 78.6% 92.3%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.67 60.0 4.42e-01 98.6% 66.1%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.65 57.0 4.99e-01 100.0% 88.0%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 54.0 4.36e-01 92.9% 76.4%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.65 59.0 4.37e-01 98.6% 62.6%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.65 47.0 3.87e-01 78.6% 71.3%
2htaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 53.0 3.54e-01 92.9% 44.1%
3cwxA00 3.40.1420.20 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD 0.62 54.0 4.53e-01 100.0% 75.2%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.61 38.0 3.14e-01 85.7% 34.4%
3u1wA01 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 3.76e-01 92.9% 58.5%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.60 51.0 4.97e-01 100.0% 97.5%
3kstA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 49.0 3.32e-01 92.9% 47.1%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.60 45.0 4.35e-01 81.4% 85.0%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 53.0 4.50e-01 98.6% 85.1%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 49.0 3.98e-01 92.9% 67.4%
6sulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 45.0 3.91e-01 81.4% 82.4%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 45.0 2.96e-01 87.1% 40.7%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.59 48.0 3.88e-01 90.0% 92.6%
3iujA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.58 46.0 3.01e-01 87.1% 35.2%
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.58 49.0 4.25e-01 100.0% 73.9%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 48.0 3.21e-01 97.1% 80.7%
1hxnA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.57 46.0 3.36e-01 91.4% 84.8%
5xyig01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 3.24e-01 98.6% 96.7%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 44.0 2.91e-01 85.7% 35.5%
3qcwA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 43.0 3.16e-01 82.9% 72.8%
1l0wA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 41.0 3.65e-01 80.0% 73.6%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 47.0 3.15e-01 100.0% 75.3%
4tpsA00 3.30.310.250 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA 0.55 49.0 3.85e-01 97.1% 56.4%
7b1xA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 46.0 3.16e-01 100.0% 70.5%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.54 45.0 4.10e-01 100.0% 84.0%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.54 44.0 3.83e-01 94.3% 71.8%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.54 44.0 3.21e-01 98.6% 60.3%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 44.0 3.75e-01 97.1% 95.3%
3d89A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.53 45.0 3.77e-01 100.0% 78.7%
4d6gA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.53 45.0 3.76e-01 97.1% 92.3%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.53 47.0 4.18e-01 100.0% 89.2%
6w0pA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 36.0 2.30e-01 72.9% 86.5%
2jd4A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 3.02e-01 82.9% 58.0%
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 45.0 3.10e-01 98.6% 82.9%
1pz7A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.13e-01 88.6% 73.9%
4whiA00 2.40.128.600 Mainly Beta › Beta Barrel › Lipocalin › 0.52 45.0 4.01e-01 100.0% 81.4%
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.51 44.0 3.84e-01 100.0% 87.5%
4aeeA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 42.0 4.34e-01 88.6% 100.0%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.01e-01 91.4% 44.6%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.50 40.0 3.17e-01 97.1% 60.7%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4500806 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.69 56.0 3.67e-01 90.0% 97.3%
4951804 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.68 48.0 3.83e-01 74.3% 52.1%
4954761 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.68 60.0 5.04e-01 100.0% 87.5%
3967232 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.66 55.0 4.67e-01 92.9% 93.3%
3222216 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.65 53.0 5.30e-01 88.6% 94.3%
4992060 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.64 53.0 3.92e-01 88.6% 90.9%
3500237 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.64 47.0 3.62e-01 77.1% 72.0%
3595344 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.64 52.0 3.30e-01 91.4% 84.9%
4949514 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.64 46.0 2.88e-01 75.7% 96.7%
3838919 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.64 49.0 3.95e-01 84.3% 90.7%
3479716 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.63 52.0 4.88e-01 92.9% 72.9%
3224579 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.63 49.0 3.19e-01 84.3% 20.7%
5081122 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.63 46.0 4.16e-01 80.0% 76.0%
4003103 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.63 48.0 3.80e-01 82.9% 68.3%
3235531 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.62 49.0 3.35e-01 84.3% 24.6%
3591534 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.62 48.0 3.98e-01 82.9% 92.8%
4323155 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.62 49.0 4.35e-01 85.7% 74.0%
5036807 3111.1.1.0 beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.61 50.0 4.50e-01 88.6% 91.6%
5048797 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.61 43.0 4.01e-01 77.1% 78.9%
5043414 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.61 49.0 4.03e-01 90.0% 100.0%
3799467 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.61 44.0 3.45e-01 77.1% 44.5%
3984091 3180.1.1.1 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG 0.60 47.0 4.14e-01 85.7% 60.0%
3936195 7579.1.1.36 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.60 50.0 3.24e-01 92.9% 91.6%
3212817 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.60 47.0 3.79e-01 90.0% 44.0%
3718240 331.1.1.12 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF155 0.60 48.0 3.95e-01 88.6% 50.8%
4944319 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 45.0 2.96e-01 85.7% 34.4%
3210875 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.59 45.0 3.07e-01 85.7% 21.5%
3604518 3111.1.1.0 beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.59 49.0 4.37e-01 91.4% 94.0%
3784810 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.59 50.0 4.61e-01 98.6% 97.9%
4981101 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.59 50.0 4.15e-01 100.0% 90.4%
4081039 66.1.1.0 beta sandwiches › ISP domain › ISP domain › ISP domain 0.58 41.0 4.14e-01 100.0% 75.7%
5001101 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.57 38.0 4.07e-01 98.6% 81.7%
3643744 5.1.4.122 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF295 0.57 45.0 3.02e-01 87.1% 36.2%
3218903 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.56 44.0 3.17e-01 87.1% 28.6%
3603228 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.56 46.0 4.16e-01 98.6% 65.3%
3738404 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.56 45.0 3.40e-01 90.0% 99.4%
3474457 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.55 45.0 4.09e-01 91.4% 77.9%
5020831 881.4.1.2 a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › DUF4367 0.55 45.0 3.71e-01 90.0% 92.8%
4292275 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.55 46.0 3.00e-01 95.7% 37.0%
3995797 220.1.1.160 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD 0.54 39.0 4.01e-01 75.7% 92.3%
5074806 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.54 45.0 3.22e-01 98.6% 94.7%
3404445 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 45.0 3.41e-01 92.9% 72.4%
3884574 66.1.1.3 beta sandwiches › ISP domain › ISP domain › ISP domain › Sol_Rieske_ferrdox 0.54 45.0 3.65e-01 97.1% 75.2%
3223863 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 40.0 2.96e-01 82.9% 55.8%
3884108 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.53 44.0 3.05e-01 97.1% 32.6%
5015520 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.53 45.0 3.17e-01 92.9% 81.9%
4256926 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 40.0 2.92e-01 81.4% 70.8%
3616765 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 38.0 2.79e-01 80.0% 61.5%
4608704 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 38.0 2.70e-01 80.0% 65.8%
3903929 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 41.0 3.03e-01 84.3% 57.1%
3485287 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.50 40.0 2.99e-01 91.4% 45.4%