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OQ789245.1__WIL01335.1__CRP6_000055__00055
Bact-VirOQ789245.1__WIL01335.1__CRP6_000055__00055
Identity
- Accession:
- OQ789245 ↗
- Kingdom:
- phage
Quality
92.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-117
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 36.1 | 7.70e-09 | 62.9% | 33.1% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gt6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.65 | 58.0 | 4.01e-01 | 96.6% | 54.6% |
| 4cp6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 59.0 | 3.99e-01 | 100.0% | 59.5% |
| 4fd0A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 59.0 | 4.27e-01 | 100.0% | 53.3% |
| 3al9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.87e-01 | 86.2% | 42.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1600195 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.63 | 58.0 | 4.72e-01 | 99.1% | 76.9% |
| 4001579 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.63 | 40.0 | 4.07e-01 | 70.7% | 65.2% |
| 3619927 | 9.2.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7042 | 0.62 | 39.0 | 4.00e-01 | 70.7% | 65.2% |
| 3399941 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 38.0 | 3.83e-01 | 74.1% | 65.0% |
| 3626089 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.54 | 43.0 | 2.77e-01 | 87.9% | 40.2% |
| 3821103 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.52 | 43.0 | 3.08e-01 | 86.2% | 47.0% |
| 3991735 | 9.1.1.49 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 | 0.51 | 37.0 | 3.81e-01 | 86.2% | 77.4% |
| 4278307 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.51 | 36.0 | 3.08e-01 | 74.1% | 45.8% |
D2
high
residues 132-200
Domain cluster:
rep: SRR1747059_scaffold_22_prodigal-single.1__X__X__00131__D159-237
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a8rA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.68 | 53.0 | 4.55e-01 | 85.5% | 54.9% |
| 1eg3A04 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.65 | 50.0 | 4.81e-01 | 85.5% | 91.5% |
| 1uurA03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.63 | 49.0 | 4.60e-01 | 88.4% | 86.4% |
| 2k7bA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.62 | 47.0 | 4.58e-01 | 82.6% | 82.9% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.62 | 43.0 | 4.11e-01 | 73.9% | 67.1% |
| 6bekD00 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 50.0 | 4.65e-01 | 91.3% | 91.0% |
| 5v89A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 46.0 | 4.34e-01 | 87.0% | 73.9% |
| 7zhgO01 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 43.0 | 4.46e-01 | 81.2% | 83.3% |
| 2vqeM01 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 43.0 | 4.36e-01 | 84.1% | 84.5% |
| 2e6wA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.57 | 46.0 | 4.23e-01 | 91.3% | 87.5% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.19e-01 | 75.4% | 49.2% |
| 3k7dA03 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.55 | 43.0 | 3.61e-01 | 91.3% | 85.1% |
| 2l2dA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.54 | 38.0 | 3.82e-01 | 76.8% | 71.2% |
| 4f52C02 | 3.30.230.130 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Cullin; Chain C, Domain 2 | 0.52 | 38.0 | 2.89e-01 | 75.4% | 45.9% |
| 1wkvA01 | 3.90.1530.20 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › | 0.52 | 39.0 | 3.78e-01 | 79.7% | 72.7% |
| 2f06A00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.52 | 43.0 | 3.51e-01 | 98.6% | 72.2% |
| 3fymA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 40.0 | 3.85e-01 | 89.9% | 85.4% |
| 5z9iA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 42.0 | 2.72e-01 | 100.0% | 58.3% |
| 4lzjA02 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 40.0 | 3.85e-01 | 88.4% | 97.5% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4329911 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.71 | 55.0 | 5.82e-01 | 88.4% | 95.0% |
| 3718248 | 101.1.9.30 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N | 0.69 | 48.0 | 4.41e-01 | 72.5% | 74.4% |
| 3532620 | 108.1.1.66 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_PLCG1 | 0.68 | 53.0 | 4.83e-01 | 85.5% | 68.4% |
| 3699958 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 50.0 | 4.91e-01 | 88.4% | 92.0% |
| 4055658 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 47.0 | 4.75e-01 | 81.2% | 82.9% |
| 3930545 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.63 | 46.0 | 4.66e-01 | 81.2% | 87.0% |
| 3322328 | 103.1.1.69 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › mTERF | 0.62 | 48.0 | 4.03e-01 | 88.4% | 54.6% |
| 5024499 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.62 | 45.0 | 3.86e-01 | 78.3% | 47.0% |
| 5052974 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 53.0 | 5.18e-01 | 97.1% | 94.7% |
| 4994521 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.61 | 44.0 | 3.74e-01 | 78.3% | 45.8% |
| 5081513 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.60 | 44.0 | 3.72e-01 | 78.3% | 45.8% |
| 4929481 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.60 | 46.0 | 4.43e-01 | 85.5% | 91.3% |
| 4999970 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.59 | 43.0 | 3.54e-01 | 78.3% | 40.7% |
| 5003054 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.59 | 45.0 | 3.67e-01 | 84.1% | 50.4% |
| 4968258 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.58 | 44.0 | 3.72e-01 | 84.1% | 54.4% |
| 5034089 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.58 | 44.0 | 3.71e-01 | 84.1% | 54.4% |
| 5072380 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.58 | 42.0 | 3.78e-01 | 78.3% | 56.0% |
| 5079455 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.58 | 45.0 | 4.34e-01 | 88.4% | 91.3% |
| 4979326 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.58 | 44.0 | 3.73e-01 | 85.5% | 56.0% |
| 5056273 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.57 | 44.0 | 3.80e-01 | 85.5% | 61.7% |
| 5039312 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.56 | 43.0 | 4.16e-01 | 85.5% | 91.3% |
| 4931056 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.56 | 43.0 | 4.24e-01 | 87.0% | 93.3% |
| 5049027 | 101.1.2.898 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fer4_9 | 0.56 | 38.0 | 2.91e-01 | 71.0% | 33.9% |
| 5045440 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.56 | 42.0 | 3.55e-01 | 85.5% | 56.2% |
| 5051445 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.55 | 43.0 | 3.62e-01 | 88.4% | 55.4% |
| 4013450 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 3.54e-01 | 75.4% | 73.3% |
| 5038398 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.51 | 37.0 | 3.60e-01 | 76.8% | 94.7% |