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OQ790161.1__WJJ54887.1__X__00010
Bact-VirOQ790161.1__WJJ54887.1__X__00010
Identity
- Accession:
- OQ790161 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-76
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.67 | 44.0 | 4.79e-01 | 71.1% | 80.0% |
| 3pm6A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 49.0 | 3.29e-01 | 84.2% | 84.3% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 54.0 | 5.03e-01 | 97.4% | 92.6% |
| 3a98B01 | 6.10.10.90 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.61 | 42.0 | 4.17e-01 | 76.3% | 67.9% |
| 1huxA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 42.0 | 3.46e-01 | 72.4% | 78.6% |
| 4dhxB00 | 1.10.246.140 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 | 0.57 | 42.0 | 3.95e-01 | 76.3% | 97.8% |
| 3epnB01 | 3.20.20.540 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Radical SAM ThiC family, central domain | 0.56 | 39.0 | 2.57e-01 | 72.4% | 96.1% |
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.56 | 46.0 | 4.12e-01 | 90.8% | 88.8% |
| 3oqvA00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.55 | 47.0 | 3.48e-01 | 96.1% | 73.0% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.55 | 39.0 | 3.78e-01 | 76.3% | 77.0% |
| 1s5jA04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.55 | 34.0 | 3.80e-01 | 86.8% | 78.7% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 36.0 | 3.44e-01 | 71.1% | 78.3% |
| 1bccH00 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.51 | 37.0 | 3.93e-01 | 78.9% | 89.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029464 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.71 | 50.0 | 4.92e-01 | 77.6% | 70.0% |
| 4157142 | 150.5.1.7 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › Mis12 | 0.61 | 45.0 | 3.94e-01 | 77.6% | 80.0% |
| 3393615 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.59 | 43.0 | 3.89e-01 | 78.9% | 64.5% |
| 5020872 | 1079.1.1.1 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD | 0.58 | 41.0 | 3.09e-01 | 75.0% | 81.0% |
| 4061482 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.58 | 41.0 | 2.94e-01 | 72.4% | 27.7% |
| 3598704 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.58 | 49.0 | 3.93e-01 | 94.7% | 53.5% |
| 1736237 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.58 | 50.0 | 4.20e-01 | 98.7% | 75.4% |
| 3272274 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.56 | 45.0 | 3.43e-01 | 89.5% | 82.6% |
| 3221354 | 103.4.1.24 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › MARCHF6_C | 0.56 | 40.0 | 3.17e-01 | 76.3% | 56.4% |
| 4201640 | 142.1.1.8 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › PhyR_sigma2 | 0.54 | 37.0 | 3.76e-01 | 78.9% | 72.0% |
| 3925330 | 148.1.1.38 ↗ | alpha arrays › Histone-like › Histone-related › Histone › MARCHF6_C | 0.53 | 40.0 | 3.14e-01 | 82.9% | 68.9% |
| 3275447 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.52 | 37.0 | 3.50e-01 | 100.0% | 61.1% |
| 3820375 | 601.29.1.13 ↗ | alpha bundles › Four-helical up-and-down bundle › TM1646-like › TM1646-like › MARCHF6_C | 0.52 | 40.0 | 3.01e-01 | 82.9% | 57.8% |
| 3444497 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.52 | 43.0 | 3.07e-01 | 98.7% | 70.0% |
| 3608538 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 39.0 | 3.05e-01 | 89.5% | 87.2% |
D2
medium
residues 77-204
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rp5A00 | 1.10.150.830 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.70 | 35.0 | 3.65e-01 | 100.0% | 50.4% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.65 | 47.0 | 4.48e-01 | 73.4% | 93.3% |
| 2w31A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.63 | 44.0 | 4.18e-01 | 71.1% | 89.5% |
| 3h37A03 | 1.20.58.1960 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 40.0 | 4.09e-01 | 99.2% | 64.8% |
| 4xxiA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.59 | 45.0 | 4.29e-01 | 78.9% | 99.3% |
| 3mxtA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.59 | 34.0 | 3.81e-01 | 89.1% | 71.0% |
| 4uiqB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 44.0 | 4.21e-01 | 79.7% | 96.1% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 41.0 | 4.02e-01 | 73.4% | 97.1% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.56 | 48.0 | 3.47e-01 | 97.7% | 94.0% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 37.0 | 3.78e-01 | 95.3% | 68.0% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.55 | 35.0 | 4.07e-01 | 88.3% | 90.0% |
| 1xo0A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.55 | 37.0 | 3.93e-01 | 82.0% | 77.5% |
| 4usaA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.55 | 37.0 | 3.80e-01 | 89.1% | 72.3% |
| 1yisA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.54 | 35.0 | 3.82e-01 | 95.3% | 79.6% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.54 | 32.0 | 3.78e-01 | 100.0% | 86.0% |
| 1b8dA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.54 | 42.0 | 3.88e-01 | 83.6% | 100.0% |
| 4xvxA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 36.0 | 3.83e-01 | 94.5% | 79.3% |
| 2wy4A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 48.0 | 4.68e-01 | 100.0% | 90.6% |
| 1dvgA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.52 | 47.0 | 3.97e-01 | 100.0% | 67.8% |
| 1ad6A00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 42.0 | 3.84e-01 | 93.0% | 77.8% |
| 7lt2A01 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.51 | 36.0 | 2.99e-01 | 74.2% | 86.9% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.51 | 36.0 | 3.72e-01 | 73.4% | 98.4% |
| 4iu9B01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 40.0 | 3.39e-01 | 85.2% | 87.9% |
| 3hyuA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 46.0 | 4.51e-01 | 100.0% | 89.4% |
| 1cg5B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 45.0 | 4.41e-01 | 99.2% | 88.7% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3824355 | 109.4.1.1381 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PATROL1 | 0.62 | 43.0 | 2.87e-01 | 71.9% | 17.7% |
| 3726453 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.60 | 41.0 | 3.37e-01 | 70.3% | 40.9% |
| 3423437 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 42.0 | 3.86e-01 | 71.9% | 57.6% |
| 5011592 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.60 | 48.0 | 3.87e-01 | 83.6% | 56.1% |
| 3398953 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.58 | 47.0 | 3.59e-01 | 85.2% | 54.5% |
| 5023000 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.58 | 46.0 | 4.47e-01 | 85.2% | 77.2% |
| 3286799 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.57 | 39.0 | 3.39e-01 | 82.0% | 45.9% |
| 4949701 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.57 | 45.0 | 4.66e-01 | 88.3% | 90.0% |
| 3973630 | 5051.1.1.0 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like | 0.56 | 50.0 | 3.51e-01 | 100.0% | 92.7% |
| 5048730 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.56 | 39.0 | 3.60e-01 | 71.9% | 96.5% |
| 4335501 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.55 | 43.0 | 3.62e-01 | 82.0% | 60.5% |
| 3697355 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.54 | 27.0 | 2.52e-01 | 72.7% | 36.8% |
| 3783258 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 42.0 | 3.60e-01 | 82.8% | 87.9% |
| 3640080 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.54 | 43.0 | 3.44e-01 | 84.4% | 75.7% |
| 4932150 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.53 | 44.0 | 3.61e-01 | 90.6% | 67.5% |
| 4324539 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 41.0 | 3.40e-01 | 85.2% | 82.9% |
| 5082892 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.52 | 47.0 | 4.26e-01 | 97.7% | 74.1% |
| 4177339 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.52 | 41.0 | 3.45e-01 | 85.9% | 80.4% |
| 5075385 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.52 | 45.0 | 3.42e-01 | 95.3% | 50.5% |
| 4927417 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.52 | 44.0 | 3.61e-01 | 93.0% | 63.3% |
| 3422917 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.52 | 35.0 | 3.27e-01 | 88.3% | 55.0% |
| 3258297 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.51 | 43.0 | 3.59e-01 | 93.8% | 52.5% |
| 3931457 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.51 | 40.0 | 3.07e-01 | 83.6% | 84.7% |
| 5055517 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.50 | 41.0 | 4.05e-01 | 88.3% | 82.9% |
| 3785433 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.50 | 39.0 | 3.30e-01 | 85.2% | 87.2% |