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OQ790161.1__WJJ54966.1__X__00089
Bact-VirOQ790161.1__WJJ54966.1__X__00089
Identity
- Accession:
- OQ790161 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-68
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vw4F01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.68 | 56.0 | 4.66e-01 | 92.3% | 63.4% |
| 3ga8A00 | 3.10.20.860 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.65 | 52.0 | 4.95e-01 | 100.0% | 92.5% |
| 1tr8A01 | 2.20.70.30 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain | 0.61 | 48.0 | 4.80e-01 | 100.0% | 90.4% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.59 | 44.0 | 3.15e-01 | 80.8% | 77.2% |
| 1ze3D00 | 3.10.20.410 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain | 0.58 | 48.0 | 3.85e-01 | 100.0% | 79.3% |
| 4aqlA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.57 | 44.0 | 3.36e-01 | 86.5% | 54.2% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.56 | 42.0 | 3.60e-01 | 88.5% | 72.4% |
| 3fsdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 41.0 | 3.22e-01 | 82.7% | 38.0% |
| 4m7xA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 36.0 | 3.16e-01 | 90.4% | 39.6% |
| 1y88A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 43.0 | 3.39e-01 | 94.2% | 44.8% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 43.0 | 3.31e-01 | 98.1% | 37.8% |
| 2uytA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 44.0 | 2.90e-01 | 94.2% | 24.3% |
| 4c23B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 43.0 | 2.89e-01 | 94.2% | 23.5% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 39.0 | 3.55e-01 | 92.3% | 55.7% |
| 3v98A03 | 3.10.450.60 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 39.0 | 3.03e-01 | 78.8% | 63.8% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 42.0 | 4.13e-01 | 94.2% | 81.0% |
| 3mlqH00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 34.0 | 3.55e-01 | 82.7% | 81.0% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 3.63e-01 | 80.8% | 71.4% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.54e-01 | 80.8% | 66.7% |
| 6fu4A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 35.0 | 2.56e-01 | 76.9% | 23.3% |
| 3p02A02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.51 | 40.0 | 3.07e-01 | 100.0% | 82.0% |
| 2atpD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 2.89e-01 | 76.9% | 52.7% |
| 2zomA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 3.16e-01 | 86.5% | 45.8% |
| 5h8iI00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.50 | 37.0 | 2.42e-01 | 86.5% | 18.4% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 36.0 | 3.06e-01 | 80.8% | 43.0% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030510 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.85 | 64.0 | 6.50e-01 | 90.4% | 84.0% |
| 5061538 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 59.0 | 5.84e-01 | 98.1% | 83.6% |
| 4968450 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 60.0 | 5.91e-01 | 100.0% | 89.1% |
| 5081200 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 60.0 | 5.77e-01 | 100.0% | 81.7% |
| 5031242 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 58.0 | 5.65e-01 | 100.0% | 85.0% |
| 4992532 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 57.0 | 5.52e-01 | 98.1% | 81.7% |
| 5031701 | 375.1.1.55 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MqsA_antitoxin | 0.67 | 56.0 | 5.25e-01 | 100.0% | 78.5% |
| 3602961 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.67 | 51.0 | 5.36e-01 | 98.1% | 100.0% |
| 380878 | 375.1.1.55 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MqsA_antitoxin | 0.67 | 55.0 | 5.11e-01 | 100.0% | 88.6% |
| 4159250 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.65 | 51.0 | 4.79e-01 | 100.0% | 70.8% |
| 4476789 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.65 | 47.0 | 4.66e-01 | 90.4% | 76.4% |
| 4961266 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.61 | 46.0 | 4.84e-01 | 96.2% | 100.0% |
| 3618061 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 49.0 | 4.24e-01 | 98.1% | 56.8% |
| 5080540 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.61 | 47.0 | 4.80e-01 | 100.0% | 94.0% |
| 4934815 | 3124.1.1.0 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain | 0.60 | 45.0 | 4.71e-01 | 96.2% | 100.0% |
| 4982629 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.60 | 47.0 | 3.14e-01 | 90.4% | 93.6% |
| 3738266 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.60 | 43.0 | 2.45e-01 | 76.9% | 12.8% |
| 3583268 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.60 | 46.0 | 2.81e-01 | 84.6% | 15.2% |
| 4012048 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 43.0 | 2.60e-01 | 76.9% | 22.5% |
| 4971344 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 40.0 | 4.14e-01 | 76.9% | 74.0% |
| 4661366 | 375.1.1.271 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › YokU | 0.59 | 46.0 | 4.28e-01 | 96.2% | 66.7% |
| 3201856 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.59 | 43.0 | 2.45e-01 | 78.8% | 13.2% |
| 3920715 | 2004.1.1.674 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21, AAA_23, SbcC_Walker_B | 0.59 | 43.0 | 2.47e-01 | 78.8% | 15.5% |
| 3253825 | 708.1.2.5 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Mss4 | 0.58 | 41.0 | 3.38e-01 | 80.8% | 68.1% |
| 3173885 | 2484.1.1.307 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A2B | 0.58 | 44.0 | 3.69e-01 | 100.0% | 44.8% |
| 3168921 | 304.48.1.105 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Peptidase_A2B | 0.57 | 43.0 | 3.69e-01 | 100.0% | 47.0% |
| 5011498 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 42.0 | 3.71e-01 | 98.1% | 51.7% |
| 3182836 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 43.0 | 3.16e-01 | 94.2% | 58.8% |
| 5033346 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 45.0 | 3.47e-01 | 94.2% | 40.0% |
| 1681454 | 304.166.1.9 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › PF29949 | 0.54 | 38.0 | 2.98e-01 | 75.0% | 73.3% |
| 3583602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 3.30e-01 | 76.9% | 54.1% |
| 858339 | 3445.1.1.1 ↗ | beta barrels › Uncharacterized protein from gene locus rrnAC0354 › Uncharacterized protein from gene locus rrnAC0354 › Uncharacterized protein from gene locus rrnAC0354 › DUF1684 | 0.53 | 42.0 | 3.06e-01 | 100.0% | 56.1% |
| 3935286 | 11.2.1.58 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 | 0.53 | 42.0 | 3.05e-01 | 100.0% | 37.9% |
| 3396138 | 383.1.2.0 ↗ | few secondary structure elements › Defensin-like › Defensin-related › Laterosporulin | 0.52 | 37.0 | 3.53e-01 | 73.1% | 71.7% |
| 3174350 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 37.0 | 3.50e-01 | 76.9% | 70.8% |
| 4658981 | 386.1.1.75 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Rua1_C | 0.52 | 38.0 | 3.04e-01 | 84.6% | 37.3% |
| 5048115 | 4294.1.1.2 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p | 0.52 | 39.0 | 3.22e-01 | 80.8% | 68.4% |
| 5049500 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 41.0 | 3.08e-01 | 94.2% | 40.7% |
| 3232211 | 11.2.1.58 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 | 0.52 | 42.0 | 2.95e-01 | 100.0% | 31.0% |
| 3273866 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 45.0 | 2.63e-01 | 100.0% | 12.7% |
| 3240522 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.50 | 41.0 | 2.80e-01 | 92.3% | 25.0% |
| 4436288 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.50 | 40.0 | 3.30e-01 | 96.2% | 74.5% |
| 5057564 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.50 | 37.0 | 2.81e-01 | 88.5% | 44.4% |