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OQ790161.1__WJJ55119.1__X__00242

Bact-Vir

OQ790161.1__WJJ55119.1__X__00242

Identity

Accession:
OQ790161 ↗
Kingdom:
phage

Quality

87.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_RTH11

TaxID: 3044021

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-83
PDB
Domain cluster: rep: NC_070999.1__YP_010675048.1__PQC65_gp135__00135__D175-256
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.68 36.0 3.63e-01 86.6% 50.0%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 42.0 4.25e-01 98.8% 64.2%
3a0rA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 32.0 2.99e-01 79.3% 38.7%
2xzmZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.56 30.0 2.91e-01 80.5% 43.3%
7uclA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 31.0 2.94e-01 79.3% 44.1%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4018741 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 39.0 2.97e-01 100.0% 31.5%
3799844 2492.1.1.2 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.54 38.0 2.97e-01 75.6% 80.5%
3479552 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 38.0 2.92e-01 76.8% 92.5%
4494197 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.53 38.0 3.53e-01 78.0% 94.5%
3583683 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.52 33.0 3.62e-01 80.5% 81.5%
3814645 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.52 39.0 3.36e-01 81.7% 95.6%
3932770 11.1.4.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 0.51 40.0 3.69e-01 86.6% 73.6%
D2 medium residues 84-185
PDB
Domain cluster: representative