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OQ808964.1__WGM54831.1__FNU4_45__00045
Bact-VirOQ808964.1__WGM54831.1__FNU4_45__00045
Identity
- Accession:
- OQ808964 ↗
- Kingdom:
- phage
Quality
85.3
mean pLDDT
Taxonomy
TaxID: 3041488
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-43
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.89 | 71.0 | 4.79e-01 | 85.4% | 97.0% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.79 | 66.0 | 5.63e-01 | 92.7% | 59.4% |
| 1ej6D02 | 1.10.287.1520 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 58.0 | 5.19e-01 | 85.4% | 70.7% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 53.0 | 4.81e-01 | 78.0% | 59.6% |
| 7r8bB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 61.0 | 3.71e-01 | 95.1% | 32.0% |
| 2j9wB00 | 1.20.120.1130 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain | 0.73 | 58.0 | 4.41e-01 | 90.2% | 81.8% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.71 | 60.0 | 3.73e-01 | 95.1% | 19.9% |
| 1cf7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 56.0 | 4.50e-01 | 90.2% | 46.3% |
| 4oo0B00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.70 | 59.0 | 3.73e-01 | 95.1% | 29.9% |
| 1xu0A00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.69 | 57.0 | 4.42e-01 | 100.0% | 63.7% |
| 5dicA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.68 | 56.0 | 4.00e-01 | 90.2% | 50.4% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 60.0 | 4.66e-01 | 100.0% | 87.4% |
| 3wgbC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.67 | 47.0 | 3.70e-01 | 73.2% | 83.1% |
| 1kq4A00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.67 | 61.0 | 3.81e-01 | 100.0% | 58.6% |
| 3uwcA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.67 | 52.0 | 3.66e-01 | 85.4% | 89.8% |
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.67 | 50.0 | 4.65e-01 | 85.4% | 78.2% |
| 4csrB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 53.0 | 4.43e-01 | 100.0% | 56.1% |
| 2dk4A00 | 4.10.280.110 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Pre-mRNA processing factor 4 domain | 0.66 | 54.0 | 4.49e-01 | 95.1% | 56.6% |
| 4p32B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 56.0 | 3.52e-01 | 97.6% | 36.1% |
| 7zh0A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.63 | 54.0 | 3.12e-01 | 100.0% | 62.5% |
| 2uvaG06 | 1.20.930.70 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.63 | 51.0 | 3.62e-01 | 87.8% | 32.8% |
| 4bg8A01 | 3.30.420.430 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.62 | 46.0 | 3.23e-01 | 80.5% | 41.1% |
| 3p3cA02 | 3.30.1700.10 | Alpha Beta › 2-Layer Sandwich › lpxc deacetylase, domain 1 › lpxc deacetylase, domain 2 | 0.62 | 51.0 | 3.49e-01 | 92.7% | 25.2% |
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.61 | 48.0 | 3.19e-01 | 90.2% | 21.8% |
| 4griA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.59 | 42.0 | 4.02e-01 | 85.4% | 77.4% |
| 4rcnA04 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.56 | 44.0 | 2.89e-01 | 100.0% | 60.4% |
| 1khcA02 | 1.10.720.50 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › PWWP, helical domain | 0.56 | 41.0 | 3.67e-01 | 90.2% | 63.8% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3584203 | 4969.1.1.1 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_B | 0.79 | 64.0 | 4.11e-01 | 87.8% | 65.7% |
| 3489407 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.77 | 64.0 | 5.17e-01 | 95.1% | 55.0% |
| 3993192 | 101.7.1.0 ↗ | alpha arrays › HTH › DEK-C › DEK-C | 0.77 | 62.0 | 5.67e-01 | 92.7% | 74.5% |
| 4135068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 64.0 | 3.69e-01 | 97.6% | 10.1% |
| 4303869 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.75 | 54.0 | 4.20e-01 | 78.0% | 38.9% |
| 4535381 | 101.1.2.603 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9 | 0.74 | 64.0 | 3.97e-01 | 97.6% | 17.8% |
| 3210238 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.73 | 53.0 | 3.23e-01 | 85.4% | 11.8% |
| 3261631 | 192.29.1.103 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › TADA2A-like_3rd | 0.72 | 59.0 | 5.10e-01 | 87.8% | 73.3% |
| 5000397 | 1.1.7.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 | 0.71 | 57.0 | 3.27e-01 | 87.8% | 17.3% |
| 3939553 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.71 | 59.0 | 3.60e-01 | 100.0% | 46.3% |
| 3391114 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.69 | 53.0 | 4.64e-01 | 90.2% | 55.4% |
| 4871185 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.67 | 46.0 | 4.73e-01 | 78.0% | 74.4% |
| 4015038 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.66 | 55.0 | 3.04e-01 | 95.1% | 16.9% |
| 4034137 | 3016.1.1.3 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_5 | 0.59 | 47.0 | 3.46e-01 | 87.8% | 90.0% |