←Back to structures

OQ817832.1__WNO49105.1__X__00002

Bact-Vir

OQ817832.1__WNO49105.1__X__00002

Identity

Accession:
OQ817832 ↗
Kingdom:
phage

Quality

90.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Achromobacter_phage_CF418P1

TaxID: 3043583

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-50
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8cvmg01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.72 54.0 4.81e-01 83.7% 75.7%
2oa9B02 3.30.70.3570 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain 0.64 51.0 3.90e-01 93.9% 88.2%
5gaeG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.61 46.0 4.00e-01 83.7% 55.6%
4gp3A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 47.0 3.71e-01 91.8% 96.7%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 3.54e-01 89.8% 73.1%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.61 48.0 3.48e-01 93.9% 66.3%
5mmiG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.61 46.0 3.97e-01 85.7% 57.1%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 46.0 3.50e-01 91.8% 85.0%
1dq3A02 3.30.160.90 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 43.0 3.85e-01 79.6% 59.2%
6i18A04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 45.0 3.63e-01 87.8% 100.0%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.71e-01 98.0% 92.7%
4n06A01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.58 43.0 3.82e-01 85.7% 92.7%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.15e-01 98.0% 68.2%
4dziB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.57 42.0 2.53e-01 81.6% 23.0%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 4.40e-01 95.9% 82.8%
1hxdA03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 4.03e-01 89.8% 88.4%
3h5aD01 3.90.930.70 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.56 39.0 3.38e-01 75.5% 62.5%
1iv8A02 3.30.1590.10 Alpha Beta › 2-Layer Sandwich › Maltooligosyl trehalose synthase, domain 2 › Maltooligosyl trehalose synthase, domain 2 0.56 38.0 2.98e-01 71.4% 31.4%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.56 41.0 3.28e-01 85.7% 75.2%
2ff4A03 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.55 47.0 3.82e-01 100.0% 96.9%
2i8dA01 3.90.1150.200 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.55 40.0 3.49e-01 81.6% 54.3%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.55 39.0 3.39e-01 79.6% 48.2%
3tx8A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.54 38.0 2.52e-01 77.6% 50.4%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 36.0 2.61e-01 71.4% 23.9%
5c00D00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 36.0 2.57e-01 75.5% 54.5%
4ew5A00 3.10.450.160 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr 0.53 37.0 3.10e-01 77.6% 85.3%
4a17E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.53 39.0 3.43e-01 85.7% 57.6%
1vq8E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.53 38.0 3.48e-01 85.7% 73.4%
2bouA02 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.52 35.0 3.61e-01 77.6% 75.6%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 39.0 3.62e-01 91.8% 86.5%
4mtnA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 34.0 3.21e-01 71.4% 54.0%
7ob9B02 3.90.1800.10 Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain 0.50 35.0 2.83e-01 75.5% 43.1%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.50 36.0 2.27e-01 83.7% 43.3%
1mkyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 38.0 2.83e-01 87.8% 89.5%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.50 36.0 2.31e-01 85.7% 18.4%
2rh0A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 37.0 3.48e-01 83.7% 87.5%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4242523 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.70 52.0 4.51e-01 83.7% 70.0%
3496475 220.1.1.13 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.61 48.0 3.60e-01 91.8% 71.4%
3289942 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 3.71e-01 77.6% 61.2%
5069267 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.61 45.0 3.90e-01 81.6% 56.2%
4599942 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.61 45.0 3.94e-01 83.7% 57.5%
4456820 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.60 44.0 3.86e-01 81.6% 56.2%
4088180 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.59 43.0 3.74e-01 83.7% 52.9%
5038830 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.58 40.0 3.26e-01 73.5% 47.0%
5037005 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.58 42.0 3.74e-01 81.6% 56.2%
4949459 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.58 42.0 3.70e-01 81.6% 56.2%
4969727 230.1.1.3 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.57 46.0 3.33e-01 95.9% 64.4%
3495969 919.1.1.0 ↗ few secondary structure elements › Ribosomal protein L36 › Ribosomal protein L36 › Ribosomal protein L36 0.57 38.0 3.97e-01 77.6% 81.4%
4945853 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.56 41.0 3.63e-01 81.6% 58.7%
2631766 3894.1.1.1 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 0.56 42.0 3.17e-01 83.7% 31.7%
4946341 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.56 41.0 2.72e-01 83.7% 26.9%
4654317 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.55 43.0 3.75e-01 89.8% 56.2%
3953965 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 42.0 2.76e-01 89.8% 79.6%
2724253 919.1.1.0 ↗ few secondary structure elements › Ribosomal protein L36 › Ribosomal protein L36 › Ribosomal protein L36 0.55 39.0 3.88e-01 79.6% 72.2%
2884367 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.55 39.0 3.45e-01 81.6% 53.6%
4558826 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.54 42.0 3.68e-01 89.8% 57.5%
3891437 376.1.6.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR 0.54 35.0 3.46e-01 89.8% 60.0%
3528892 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.54 40.0 2.66e-01 85.7% 31.2%
2855749 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.54 38.0 3.39e-01 81.6% 56.1%
4968405 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.53 41.0 3.24e-01 87.8% 70.0%
1567045 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.53 36.0 2.87e-01 75.5% 86.0%
4865239 101.1.2.28 ↗ alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.53 38.0 4.00e-01 85.7% 100.0%
1760850 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.52 39.0 2.86e-01 85.7% 93.5%
3702792 2003.1.2.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.52 42.0 2.54e-01 100.0% 84.3%
3264641 2498.1.1.14 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.51 37.0 2.17e-01 81.6% 30.2%
4110878 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 38.0 3.94e-01 95.9% 97.8%
4030804 2004.1.1.159 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.50 40.0 2.57e-01 93.9% 73.1%
D2 high residues 61-133
PDB
Domain cluster: rep: KM199771.1__AIK68528.1__Lo5R7ANS_58__00058__D55-134