←Back to structures

OQ817832.1WNO49162.1X__00059

Bact-Vir

OQ817832.1__WNO49162.1__X__00059

Identity

Accession:: OQ817832 ↗
Kingdom:: phage

Quality

83.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Achromobacter_phage_CF418P1

TaxID: 3043583

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 29-53_65-86_213-228

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4flaC00	6.10.250.2560	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.61	43.0	3.41e-01	74.6%	40.9%
2qwoB00	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.59	41.0	3.69e-01	73.0%	89.1%
7xrxB01	1.20.1420.20	Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif	0.57	48.0	3.01e-01	96.8%	32.4%
1pn9B02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.56	40.0	3.20e-01	76.2%	44.6%
4m0mA03	1.20.1270.430	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.56	42.0	4.01e-01	93.7%	69.6%
5jj6B01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.55	36.0	3.22e-01	71.4%	43.8%
1otvA00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.55	44.0	2.98e-01	90.5%	62.2%
4cs9B02	1.20.120.1350	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain	0.54	43.0	3.76e-01	96.8%	55.1%
1j1vA00	1.10.1750.10	Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain	0.54	39.0	3.51e-01	79.4%	57.4%
3lewA01	1.25.40.390	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.52	45.0	2.88e-01	98.4%	67.7%
2hkvA01	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.51	41.0	3.29e-01	93.7%	79.4%
1rfyB00	1.10.287.160	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat	0.50	35.0	3.19e-01	74.6%	59.1%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3471656	101.1.17.0 ↗	alpha arrays › HTH › HTH › FF domain	0.59	38.0	3.55e-01	100.0%	51.2%
3922074	110.1.1.1 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death	0.55	38.0	3.35e-01	73.0%	84.2%
3250046	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.53	33.0	3.17e-01	76.2%	50.0%
3274887	101.1.17.0 ↗	alpha arrays › HTH › HTH › FF domain	0.51	36.0	3.68e-01	73.0%	81.7%
1111362	191.1.1.17 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_13	0.50	42.0	3.46e-01	96.8%	83.9%
5005290	101.1.6.0 ↗	alpha arrays › HTH › HTH › TrpR	0.50	34.0	3.39e-01	73.0%	80.0%

D2 medium residues 87-212

PDB

Domain cluster: rep: OK665842.1__UEW68648.1__X__00084__D89-201

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1g3nC01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.73	47.0	4.86e-01	81.7%	68.3%
2k9lA00	1.10.10.1330	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain	0.72	42.0	5.27e-01	73.0%	94.7%
2f2cA02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.71	48.0	5.15e-01	81.7%	81.1%
1zp2A02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.66	46.0	4.89e-01	85.7%	81.2%
4ivnA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.65	32.0	4.05e-01	75.4%	77.6%
6tqfA01	1.20.1560.10	Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain	0.65	46.0	3.19e-01	71.4%	91.6%
4by6D02	1.25.40.800	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.54	37.0	3.11e-01	70.6%	75.6%
3zukA01	3.40.390.10	Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain)	0.53	42.0	3.16e-01	84.1%	51.7%
2pmiB00	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.53	45.0	3.76e-01	90.5%	76.1%
5jbrA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	32.0	3.85e-01	72.2%	90.7%
4epzA00	1.25.40.810	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ	0.51	35.0	3.27e-01	97.6%	55.8%
4c0eA02	1.25.40.800	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.51	36.0	3.03e-01	73.0%	69.3%
2c0kB00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.51	41.0	3.95e-01	93.7%	74.5%
6srbA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.50	37.0	3.93e-01	94.4%	88.1%
1tjcA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.50	30.0	3.42e-01	76.2%	78.9%

ECOD (18)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3681611	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.78	52.0	4.85e-01	82.5%	55.5%
2842	101.1.10.10 ↗	alpha arrays › HTH › HTH › Cyclin-like › K-cyclin_vir_C	0.73	47.0	5.21e-01	81.7%	81.2%
5001161	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.67	45.0	4.69e-01	77.0%	73.9%
2167872	102.1.1.27 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5	0.62	34.0	4.33e-01	73.8%	91.8%
3809108	109.4.1.1767 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, E_motif	0.62	36.0	3.53e-01	83.3%	51.4%
5019202	101.1.1.494 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_29	0.60	34.0	4.26e-01	77.0%	93.3%
5017706	101.1.6.14 ↗	alpha arrays › HTH › HTH › TrpR › HTH_29	0.59	34.0	4.10e-01	76.2%	87.5%
3493091	101.1.10.9 ↗	alpha arrays › HTH › HTH › Cyclin-like › Cyclin	0.59	49.0	4.58e-01	91.3%	90.0%
3767389	101.1.10.18 ↗	alpha arrays › HTH › HTH › Cyclin-like › BRF2-like_C_cyclin_rpt	0.59	48.0	4.40e-01	88.1%	75.8%
3684873	109.4.1.681 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2	0.57	41.0	2.83e-01	74.6%	94.4%
3577478	101.1.10.1 ↗	alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N	0.56	47.0	4.16e-01	91.3%	78.4%
5019927	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.55	40.0	4.43e-01	78.6%	98.0%
3611288	101.1.10.9 ↗	alpha arrays › HTH › HTH › Cyclin-like › Cyclin	0.55	44.0	3.97e-01	85.7%	88.8%
3731256	109.4.1.681 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2	0.53	40.0	3.43e-01	80.2%	89.3%
3927985	188.1.1.1 ↗	alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep	0.53	47.0	3.90e-01	100.0%	78.7%
5037318	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.52	32.0	3.88e-01	99.2%	94.0%
3492714	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.51	46.0	4.13e-01	99.2%	89.4%
4557838	7014.1.1.2 ↗	alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE	0.50	36.0	3.55e-01	98.4%	68.6%