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OQ817837.1__WNO49280.1__X__00028
Bact-VirOQ817837.1__WNO49280.1__X__00028
Identity
- Accession:
- OQ817837 ↗
- Kingdom:
- phage
Quality
85.4
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-119_262-275
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bwgD00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.81 | 34.0 | 3.08e-01 | 100.0% | 29.9% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 55.0 | 4.93e-01 | 100.0% | 65.4% |
| 1k8kD01 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.66 | 60.0 | 4.73e-01 | 100.0% | 53.6% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.60 | 54.0 | 4.73e-01 | 100.0% | 74.3% |
| 1nvmB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 53.0 | 4.24e-01 | 100.0% | 82.5% |
| 8dy9I01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 44.0 | 3.25e-01 | 100.0% | 29.6% |
| 3tx8A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 43.0 | 3.74e-01 | 90.8% | 51.8% |
| 4emiA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.56 | 38.0 | 3.59e-01 | 98.7% | 59.3% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.55 | 48.0 | 3.89e-01 | 100.0% | 66.2% |
| 7q6gA01 | 3.30.1490.110 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.54 | 42.0 | 4.21e-01 | 82.9% | 96.1% |
| 5vqjA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.54 | 46.0 | 3.44e-01 | 100.0% | 86.6% |
| 1e3hA03 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.54 | 47.0 | 3.44e-01 | 98.7% | 44.6% |
| 2ebeA00 | 3.30.70.2290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF3208) | 0.54 | 40.0 | 3.66e-01 | 85.5% | 58.5% |
| 3lvtA05 | 2.60.40.2220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 4.35e-01 | 100.0% | 89.6% |
| 6sulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 46.0 | 4.14e-01 | 100.0% | 69.4% |
| 4gx0B03 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.53 | 40.0 | 3.99e-01 | 81.6% | 78.2% |
| 5v7qT00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 48.0 | 4.38e-01 | 100.0% | 77.6% |
| 6iw2A01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.53 | 47.0 | 3.92e-01 | 100.0% | 90.2% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 46.0 | 3.67e-01 | 100.0% | 76.3% |
| 2r9qC01 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.52 | 46.0 | 3.64e-01 | 100.0% | 62.6% |
| 4hvzA02 | 3.30.70.2970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 | 0.52 | 42.0 | 3.70e-01 | 89.5% | 61.6% |
| 4g65B02 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.51 | 43.0 | 4.08e-01 | 100.0% | 79.3% |
| 4liqE05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.87e-01 | 100.0% | 71.0% |
| 1bqsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 45.0 | 3.88e-01 | 100.0% | 63.0% |
| 3ci0I00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.50 | 34.0 | 3.38e-01 | 85.5% | 65.1% |
| 6yllA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 42.0 | 4.13e-01 | 97.4% | 89.0% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3934399 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 54.0 | 4.93e-01 | 100.0% | 61.0% |
| 3584228 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.71 | 53.0 | 3.89e-01 | 100.0% | 29.0% |
| 3622661 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.71 | 53.0 | 4.84e-01 | 100.0% | 61.0% |
| 3992788 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 52.0 | 4.82e-01 | 100.0% | 61.0% |
| 3895938 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.70 | 56.0 | 5.17e-01 | 100.0% | 67.0% |
| 3576362 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 48.0 | 4.39e-01 | 100.0% | 56.0% |
| 3990209 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.68 | 51.0 | 4.75e-01 | 100.0% | 63.6% |
| 3862603 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.65 | 49.0 | 4.60e-01 | 100.0% | 65.3% |
| 3598878 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.63 | 57.0 | 4.39e-01 | 100.0% | 79.3% |
| 3847237 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.63 | 47.0 | 4.34e-01 | 100.0% | 60.0% |
| 3845942 | 9.13.1.7 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › Pep_M12B_propep | 0.63 | 33.0 | 2.96e-01 | 97.4% | 35.8% |
| 3522520 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.61 | 45.0 | 4.47e-01 | 81.6% | 73.8% |
| 4939079 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 49.0 | 4.98e-01 | 100.0% | 90.7% |
| 3927897 | 325.1.1.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like | 0.61 | 45.0 | 4.32e-01 | 85.5% | 69.4% |
| 3231144 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.61 | 54.0 | 4.18e-01 | 100.0% | 76.5% |
| 4931826 | 304.48.1.32 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD | 0.61 | 47.0 | 3.77e-01 | 85.5% | 71.2% |
| 3965094 | 4261.1.1.0 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like | 0.59 | 52.0 | 5.00e-01 | 100.0% | 85.6% |
| 4952370 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.58 | 52.0 | 4.11e-01 | 100.0% | 60.0% |
| 3611624 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 51.0 | 4.22e-01 | 100.0% | 72.6% |
| 5057236 | 325.1.1.17 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like › GARS_A | 0.56 | 49.0 | 3.25e-01 | 100.0% | 51.5% |
| 3592495 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.56 | 48.0 | 4.16e-01 | 100.0% | 62.6% |
| 3835200 | 3556.1.1.0 ↗ | a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 | 0.56 | 48.0 | 4.10e-01 | 100.0% | 76.2% |
| 3385480 | 319.3.1.3 ↗ | beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › DUF7494 | 0.55 | 49.0 | 4.07e-01 | 100.0% | 81.5% |
| 3201614 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 48.0 | 3.99e-01 | 100.0% | 54.3% |
| 3679417 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.55 | 48.0 | 4.05e-01 | 100.0% | 76.2% |
| 4013561 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 48.0 | 4.10e-01 | 100.0% | 61.6% |
| 4451470 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.54 | 48.0 | 3.99e-01 | 97.4% | 76.9% |
| 3838015 | 319.3.1.3 ↗ | beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › DUF7494 | 0.54 | 47.0 | 3.98e-01 | 100.0% | 96.9% |
| 5040496 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.52 | 37.0 | 3.66e-01 | 100.0% | 71.2% |
| 3187444 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.52 | 47.0 | 4.09e-01 | 100.0% | 72.2% |
| 3714845 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 47.0 | 3.95e-01 | 100.0% | 68.0% |
| 3377568 | 3459.1.1.3 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 | 0.51 | 38.0 | 3.75e-01 | 81.6% | 88.2% |
| 3507519 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 35.0 | 3.87e-01 | 98.7% | 90.0% |
| 4965901 | 331.2.1.15 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › DUF7845 | 0.51 | 38.0 | 2.98e-01 | 81.6% | 76.0% |
| 4977365 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.51 | 37.0 | 3.22e-01 | 80.3% | 87.7% |
| 3552306 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.50 | 43.0 | 3.85e-01 | 96.1% | 84.5% |
| 3834758 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.50 | 40.0 | 3.57e-01 | 88.2% | 68.2% |
D2
high
residues 121-257
Domain cluster:
rep: KJ019161.1__AIX46147.1__Syn7803C36_92__00092__D107-227
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24801.2 best | FNIII-A_GpJ | 34.6 | 2.60e-08 | 84.7% | 77.0% |