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OQ817837.1__WNO49309.1__X__00064

Bact-Vir

OQ817837.1__WNO49309.1__X__00064

Identity

Accession:
OQ817837 ↗
Kingdom:
phage

Quality

83.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Achromobacter_phage_kwar_LB4

TaxID: 3043589

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-84
PDB
Domain cluster: rep: JX195166.1__AFQ22207.1__My1_048__00048__D4-73
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mamA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 49.0 4.30e-01 75.6% 50.0%
2m4vA00 2.20.28.270 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase-binding protein A 0.58 38.0 3.86e-01 76.8% 68.8%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.57 39.0 2.85e-01 70.7% 95.3%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 43.0 3.66e-01 96.3% 84.4%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.50 38.0 3.92e-01 91.5% 87.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3385437 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.91 66.0 6.13e-01 84.1% 62.0%
3838774 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.88 64.0 5.78e-01 84.1% 58.1%
4254576 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.83 62.0 5.75e-01 80.5% 64.0%
4032331 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.82 65.0 5.68e-01 82.9% 62.6%
3964437 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.81 62.0 5.52e-01 84.1% 59.1%
2392036 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.81 63.0 5.59e-01 84.1% 59.3%
3988098 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.81 65.0 5.61e-01 84.1% 62.5%
4674798 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.78 63.0 5.67e-01 85.4% 63.6%
3970095 3430.1.1.0 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain 0.78 64.0 5.62e-01 86.6% 61.7%
2775138 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 51.0 4.13e-01 87.8% 55.0%
3026658 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.56 48.0 3.92e-01 96.3% 97.5%
4096587 3174.2.1.2 ↗ beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › OrtA 0.56 40.0 3.93e-01 76.8% 95.6%
4020650 4135.1.1.1 ↗ beta duplicates or obligate multimers › MAL13P1.257-like › MAL13P1.257-like › MAL13P1.257-like › CXXC_Zn-b_euk 0.55 38.0 3.04e-01 70.7% 69.4%
3495262 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.55 48.0 3.69e-01 95.1% 86.7%
3981111 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.54 42.0 3.43e-01 84.1% 64.5%
3630527 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 39.0 4.25e-01 80.5% 95.4%
3907467 382.1.1.1 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.52 38.0 3.78e-01 81.7% 75.3%
4563045 3767.1.1.0 ↗ a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain 0.51 42.0 3.33e-01 92.7% 87.2%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.51 39.0 4.06e-01 90.2% 90.7%
4361789 3767.1.1.0 ↗ a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain 0.51 39.0 3.38e-01 85.4% 71.1%
None — 0.50 44.0 2.68e-01 97.6% 28.6%
3728853 3767.1.1.0 ↗ a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain 0.50 41.0 3.39e-01 92.7% 83.7%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 34.0 3.62e-01 72.0% 84.3%