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OQ818704.1__WJN64481.1__Erwinia_phage_Papaline_00013__00013

Bact-Vir

OQ818704.1__WJN64481.1__Erwinia_phage_Papaline_00013__00013

Identity

Accession:
OQ818704 ↗
Kingdom:
phage

Quality

62.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chaseviridae› Loessnervirus› Erwinia_phage_Papaline

TaxID: 3056492

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 65-155
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sgoA01 3.30.2280.10 Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) 0.71 47.0 4.49e-01 86.8% 57.4%
3fqmA01 2.20.25.210 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B 0.61 33.0 3.94e-01 90.1% 78.7%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.59 35.0 2.68e-01 96.7% 28.0%
2ichA02 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.57 48.0 4.26e-01 92.3% 96.2%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.56 46.0 3.75e-01 91.2% 93.8%
6lofA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.54 37.0 3.03e-01 100.0% 39.5%
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.53 42.0 3.87e-01 85.7% 83.6%
4af1A02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.53 41.0 3.69e-01 83.5% 96.8%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.53 46.0 3.46e-01 97.8% 72.7%
4g29A00 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.52 39.0 3.30e-01 83.5% 79.5%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.51 39.0 4.06e-01 81.3% 91.7%
4jp0A01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 43.0 3.78e-01 95.6% 97.9%
3rlfF03 2.40.430.10 Mainly Beta › Beta Barrel › Periplasmic binding protein-like II › D-maltodextrin-binding protein, MBP 0.51 45.0 4.59e-01 96.7% 100.0%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.50 42.0 3.62e-01 93.4% 98.0%
4gniA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 36.0 3.74e-01 76.9% 98.9%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4988423 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.64 48.0 5.06e-01 91.2% 90.0%
3803352 3257.1.1.1 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.64 57.0 4.36e-01 97.8% 93.0%
3775139 241.4.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 0.60 45.0 4.14e-01 85.7% 60.8%
3509389 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 51.0 4.52e-01 93.4% 71.5%
3959638 58.2.1.0 ↗ beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain 0.59 50.0 4.32e-01 100.0% 59.3%
998899 58.2.1.1 ↗ beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain › LigD_N 0.58 49.0 4.52e-01 98.9% 72.0%
5013176 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.58 44.0 4.79e-01 91.2% 100.0%
5014493 331.3.1.12 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like 0.58 41.0 3.11e-01 93.4% 29.6%
3512735 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.57 48.0 3.66e-01 94.5% 66.2%
3979836 4142.1.1.1 ↗ a+b two layers › YehR-like › YehR-like › YehR-like › DUF1307 0.57 46.0 4.08e-01 89.0% 97.0%
4621658 241.4.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 0.56 47.0 4.03e-01 92.3% 66.9%
5081724 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.56 46.0 3.63e-01 92.3% 80.0%
3217670 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.56 39.0 4.28e-01 92.3% 95.7%
4482319 5.1.11.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A 0.55 44.0 2.76e-01 85.7% 22.2%
3548957 5.1.4.241 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › eIF2A 0.55 44.0 2.81e-01 85.7% 28.8%
3613101 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 3.01e-01 93.4% 99.1%
3718410 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 3.07e-01 93.4% 97.0%
3427234 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.55 47.0 3.38e-01 92.3% 41.6%
3660454 5.1.5.96 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.54 49.0 3.37e-01 97.8% 94.6%
4983075 2484.1.1.38 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.54 43.0 3.87e-01 86.8% 84.8%
3428912 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.54 48.0 3.26e-01 100.0% 96.2%
4177358 4947.1.1.1 ↗ a+b complex topology › barrel domain in MalF N-terminal region › barrel domain in MalF N-terminal region › barrel domain in MalF N-terminal region › MalF_P2 0.53 47.0 4.77e-01 97.8% 97.8%
3250807 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 45.0 3.53e-01 95.6% 79.5%
3480535 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 40.0 3.87e-01 91.2% 72.4%
3243986 220.1.1.79 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › TBC1D23_C 0.52 43.0 4.16e-01 92.3% 88.6%
4190296 2484.1.1.38 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.52 41.0 3.75e-01 85.7% 85.0%
3254772 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.52 43.0 3.33e-01 93.4% 79.5%
5078927 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.51 43.0 3.41e-01 93.4% 63.6%
4946435 512.1.1.5 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd 0.51 42.0 3.36e-01 93.4% 63.6%
5062226 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.51 42.0 3.33e-01 93.4% 62.0%
4967928 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.50 42.0 3.34e-01 93.4% 61.5%