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OQ832096.1__WJZ48857.1__X__00006

Bact-Vir

OQ832096.1__WJZ48857.1__X__00006

Identity

Accession:
OQ832096 ↗
Kingdom:
phage

Quality

87.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Halomonas_phage_vB_HmeY_H4907

TaxID: 3056163

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-79
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vrwB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.73 36.0 3.11e-01 74.7% 31.4%
3lbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 46.0 3.44e-01 75.9% 87.0%
3q0xA01 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.61 44.0 3.49e-01 81.0% 38.7%
7vyjB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 43.0 3.20e-01 93.7% 31.2%
1jb7A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 42.0 3.27e-01 72.2% 92.3%
6r77A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.60 44.0 3.51e-01 78.5% 82.5%
3ednA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.57 40.0 3.44e-01 74.7% 65.7%
2fpqA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.57 41.0 2.55e-01 98.7% 14.3%
6e5bN00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.56 39.0 2.98e-01 73.4% 90.5%
1ym5A01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.54 39.0 3.36e-01 77.2% 69.9%
2rbcA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 41.0 2.86e-01 86.1% 91.5%
4aezA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 39.0 2.57e-01 77.2% 84.4%
1qyaB01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.53 37.0 3.21e-01 77.2% 61.1%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 37.0 2.73e-01 74.7% 28.1%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 36.0 2.44e-01 70.9% 90.5%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4986732 331.16.1.1 ↗ a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 0.71 30.0 3.19e-01 72.2% 44.3%
5072279 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.63 45.0 2.85e-01 96.2% 15.1%
5038927 331.16.1.1 ↗ a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 0.63 32.0 2.84e-01 77.2% 32.7%
3438472 219.1.1.23 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB 0.62 47.0 3.42e-01 81.0% 83.1%
4946513 1.1.9.55 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ATP-sulfurylase 0.62 43.0 3.44e-01 72.2% 90.0%
4955882 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.61 44.0 3.73e-01 74.7% 74.6%
5079664 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 43.0 3.08e-01 94.9% 27.8%
3968442 2484.1.1.30 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N 0.61 44.0 3.14e-01 91.1% 27.4%
3596173 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 49.0 3.13e-01 92.4% 97.1%
5013188 2484.1.1.30 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N 0.58 45.0 3.22e-01 86.1% 29.1%
3280061 2008.1.1.20 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 0.57 39.0 3.06e-01 70.9% 78.6%
4943724 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 48.0 3.08e-01 91.1% 21.4%
3608210 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 49.0 3.12e-01 100.0% 79.1%
4374641 2484.1.1.30 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N 0.56 41.0 2.95e-01 94.9% 29.0%
5024230 2484.1.1.30 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N 0.54 39.0 2.90e-01 75.9% 30.2%
4045704 2484.1.1.30 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N 0.54 40.0 2.96e-01 79.7% 43.7%
3977938 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.53 37.0 3.97e-01 72.2% 84.3%
3996654 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 40.0 3.55e-01 88.6% 57.3%
4975855 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.53 39.0 2.75e-01 84.8% 91.9%
3786890 874.1.1.0 ↗ a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain 0.53 43.0 3.36e-01 94.9% 82.1%
1503101 2484.1.1.30 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N 0.51 39.0 2.81e-01 82.3% 28.2%
3970157 286.1.1.0 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like 0.51 36.0 3.07e-01 75.9% 70.5%
3558235 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.50 30.0 2.58e-01 77.2% 33.3%
D2 high residues 109-195
PDB
Domain cluster: rep: MW960037.1__QWY83581.1__X__00027__D159-241
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.68 46.0 3.87e-01 100.0% 40.7%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.68 43.0 4.98e-01 71.3% 88.9%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.64 42.0 4.15e-01 98.9% 63.0%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.63 51.0 4.85e-01 87.4% 81.7%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 49.0 4.22e-01 85.1% 64.2%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.56 45.0 3.91e-01 88.5% 70.2%
3bnvD00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 42.0 3.64e-01 80.5% 89.5%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 37.0 3.78e-01 93.1% 69.9%
8himB01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.55 40.0 3.29e-01 75.9% 54.3%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.54 44.0 3.81e-01 100.0% 55.8%
5gm0A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 41.0 3.53e-01 100.0% 54.6%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 40.0 3.24e-01 80.5% 45.8%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.52 44.0 3.76e-01 93.1% 64.1%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 3.56e-01 88.5% 58.4%
2o5vA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 41.0 3.26e-01 88.5% 51.4%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 42.0 3.53e-01 95.4% 53.4%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 39.0 3.41e-01 100.0% 55.3%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.50 43.0 3.84e-01 97.7% 77.3%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3973700 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.91 75.0 7.28e-01 92.0% 78.9%
3974671 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.86 74.0 7.53e-01 90.8% 95.3%
2491359 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.82 75.0 6.30e-01 96.6% 67.6%
3967853 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.81 73.0 6.60e-01 96.6% 73.0%
1140350 241.15.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.69 46.0 3.84e-01 100.0% 39.4%
383967 216.1.1.7 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d1 0.64 42.0 4.19e-01 98.9% 64.4%
4010689 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.64 51.0 4.90e-01 86.2% 87.0%
5036065 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 46.0 4.96e-01 86.2% 94.7%
3512529 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.56 50.0 4.09e-01 97.7% 63.1%
3271023 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.56 50.0 3.96e-01 97.7% 62.8%
4026173 10.1.1.21 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › 3keto-disac_hyd 0.55 48.0 3.79e-01 100.0% 58.5%
4339692 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.54 44.0 3.57e-01 89.7% 88.2%
4159356 2004.1.1.429 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.51 42.0 2.75e-01 90.8% 27.1%
3607354 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.50 42.0 3.66e-01 93.1% 62.3%
D3 high residues 221-326
PDB
Domain cluster: representative
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 62.0 6.36e-01 99.1% 98.0%
1oh4A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 55.0 4.68e-01 90.6% 94.3%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 27.0 2.77e-01 99.1% 35.8%
2rttA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 47.0 4.77e-01 99.1% 77.1%
2ylkA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.64 57.0 5.10e-01 99.1% 71.0%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.63 52.0 4.15e-01 100.0% 43.4%
3ideA02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.63 53.0 4.83e-01 91.5% 96.5%
4ofqA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 57.0 4.99e-01 99.1% 80.6%
3wmqA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 50.0 5.23e-01 90.6% 95.7%
1wzaA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 42.0 4.74e-01 100.0% 93.7%
3hr6A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 56.0 4.91e-01 100.0% 72.6%
2ed6A01 2.60.40.2770 Mainly Beta › Sandwich › Immunoglobulin-like › WSSV envelope protein-like 0.62 51.0 4.53e-01 90.6% 97.4%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 4.02e-01 92.5% 75.7%
1l3wA03 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.61 49.0 4.85e-01 91.5% 80.7%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 46.0 4.58e-01 99.1% 75.7%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 4.03e-01 92.5% 77.0%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 3.87e-01 92.5% 73.5%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 3.78e-01 92.5% 68.1%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 4.25e-01 91.5% 82.0%
1g87A02 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.61 54.0 4.74e-01 99.1% 71.7%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 4.05e-01 92.5% 74.2%
4uypA01 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 50.0 4.57e-01 99.1% 68.6%
2pn5A10 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.60 48.0 4.32e-01 99.1% 62.3%
1g1kA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 49.0 4.52e-01 99.1% 67.1%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 50.0 4.01e-01 92.5% 76.8%
4nehA05 2.60.40.1530 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 0.60 53.0 4.53e-01 100.0% 68.5%
5ao2B02 3.30.70.2760 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 42.0 4.51e-01 73.6% 93.3%
3esmA00 2.60.40.2230 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein YcnI-like PF07987, DUF1775 0.59 47.0 4.31e-01 100.0% 65.2%
2yvsA02 3.30.70.2560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 32.0 4.00e-01 73.6% 91.5%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 49.0 4.11e-01 91.5% 82.4%
8begA03 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 52.0 4.69e-01 99.1% 79.9%
4iefA00 2.60.40.3800 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 53.0 4.37e-01 100.0% 84.4%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 49.0 3.68e-01 92.5% 74.6%
2xbtA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.59 52.0 4.60e-01 99.1% 70.9%
3ul4A01 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 48.0 4.47e-01 99.1% 70.0%
1anuA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 49.0 4.55e-01 99.1% 72.5%
1fjeB01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.58 37.0 4.11e-01 74.5% 84.0%
3ks7A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 4.03e-01 90.6% 100.0%
8begA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 51.0 4.45e-01 99.1% 81.4%
3ne5C02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.57 46.0 4.73e-01 88.7% 96.1%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 3.75e-01 96.2% 87.7%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 3.70e-01 92.5% 69.3%
4cp9A00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.56 45.0 4.39e-01 87.7% 97.5%
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.56 46.0 4.68e-01 90.6% 91.3%
1cc8A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 34.0 4.00e-01 74.5% 88.9%
4dk0A02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.55 44.0 4.67e-01 86.8% 100.0%
2ofhX00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 33.0 3.91e-01 73.6% 90.1%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.55 43.0 4.59e-01 94.3% 100.0%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 4.18e-01 89.6% 99.2%
1qupA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 33.0 3.86e-01 74.5% 90.0%
3rbsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.96e-01 100.0% 85.2%
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.53 43.0 4.32e-01 87.7% 93.3%
2cpqA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.53 32.0 3.95e-01 72.6% 100.0%
3bnwB00 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.53 43.0 3.86e-01 90.6% 64.3%
3njfA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 43.0 4.22e-01 99.1% 83.9%
1nxmA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 41.0 3.36e-01 90.6% 46.4%
5b6iA02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.51 44.0 4.46e-01 98.1% 99.1%
7esdB01 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 36.0 3.76e-01 96.2% 84.8%
2grvA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.50 41.0 4.04e-01 98.1% 82.3%
1e5rB01 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.50 45.0 3.82e-01 99.1% 62.9%
3lqcA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 44.0 3.98e-01 100.0% 94.7%
3a35A01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.50 36.0 3.80e-01 84.0% 87.0%
2q6iA02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.50 42.0 4.32e-01 98.1% 99.0%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3969203 4182.1.1.0 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.83 70.0 6.85e-01 100.0% 82.6%
3602447 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.68 53.0 4.54e-01 99.1% 51.8%
1714453 11.21.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.68 54.0 5.72e-01 89.6% 95.7%
1714450 11.21.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.67 52.0 5.52e-01 90.6% 94.7%
4945557 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.67 46.0 3.89e-01 99.1% 42.9%
3588730 4182.1.1.0 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.66 50.0 5.25e-01 94.3% 88.4%
1215 10.2.1.34 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.65 55.0 4.69e-01 92.5% 93.6%
3273186 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.63 48.0 4.15e-01 99.1% 52.1%
3715555 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 53.0 5.31e-01 99.1% 89.8%
4963502 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.63 56.0 5.21e-01 100.0% 80.0%
3492758 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 54.0 4.89e-01 99.1% 71.7%
3831061 10.32.1.198 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 0.61 54.0 4.41e-01 100.0% 94.5%
1400716 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.60 51.0 4.05e-01 92.5% 74.2%
3172237 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.60 53.0 4.18e-01 100.0% 46.8%
5027245 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.60 41.0 4.55e-01 99.1% 92.5%
2983651 11.1.5.50 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › AgI_II_C2 0.59 52.0 4.62e-01 99.1% 76.3%
3256977 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.59 53.0 4.08e-01 100.0% 46.5%
3593942 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 48.0 4.34e-01 90.6% 85.3%
2982483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.59 49.0 3.86e-01 92.5% 76.4%
3491698 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 4.46e-01 99.1% 70.0%
4190241 12.1.1.44 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_5_C 0.59 52.0 5.14e-01 100.0% 93.6%
5061517 304.3.1.1 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.59 36.0 4.28e-01 75.5% 94.3%
3460178 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 42.0 4.14e-01 95.3% 69.6%
3252659 11.1.1.802 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.59 44.0 4.64e-01 89.6% 89.5%
3398504 11.1.1.588 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fibulin_C 0.58 51.0 4.82e-01 100.0% 90.0%
4888111 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.57 46.0 3.89e-01 90.6% 84.7%
3470243 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 46.0 3.77e-01 93.4% 91.6%
3236530 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 49.0 4.19e-01 100.0% 79.4%
3757215 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 4.30e-01 92.5% 82.2%
3495453 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 4.30e-01 99.1% 76.0%
5035178 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.55 44.0 4.39e-01 87.7% 88.2%
5055324 4182.1.1.0 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.55 49.0 4.43e-01 100.0% 80.0%
3218582 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.55 47.0 4.23e-01 100.0% 68.0%
4990898 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 44.0 4.60e-01 85.8% 100.0%
3499790 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 45.0 3.96e-01 92.5% 73.3%
3810482 1.1.7.46 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B 0.54 45.0 4.23e-01 94.3% 83.0%
4927104 10.1.2.193 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Thioredoxin_10 0.54 48.0 4.24e-01 100.0% 90.3%
5010660 304.28.1.38 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › CAA_C 0.54 39.0 3.47e-01 76.4% 78.1%
4002435 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 4.15e-01 100.0% 64.8%
3313648 11.1.1.161 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII 0.53 44.0 4.25e-01 100.0% 80.0%
3904321 11.1.5.95 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › TMEM132_3rd 0.53 46.0 4.18e-01 100.0% 71.0%
3508760 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 47.0 4.55e-01 100.0% 96.7%
5032356 10.20.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.53 40.0 4.21e-01 89.6% 87.8%
3491085 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.53 43.0 3.42e-01 87.7% 43.2%
3944005 1.1.7.87 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.53 42.0 3.99e-01 95.3% 71.4%
5030035 10.1.2.193 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Thioredoxin_10 0.53 47.0 4.17e-01 100.0% 81.9%
4010415 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 44.0 4.04e-01 94.3% 79.3%
3486373 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 4.06e-01 88.7% 76.8%
3908445 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.52 41.0 3.83e-01 87.7% 71.1%
3813200 1.1.7.9 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.52 44.0 4.38e-01 99.1% 95.6%
3569205 11.1.1.419 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF3694 0.51 43.0 3.60e-01 95.3% 64.5%
3408306 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.51 45.0 4.28e-01 98.1% 98.4%
3537007 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.51 43.0 3.56e-01 96.2% 82.9%
4123950 11.1.1.1113 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29737 0.51 45.0 3.81e-01 97.2% 78.3%
None — 0.51 45.0 3.37e-01 99.1% 70.5%
3497218 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 41.0 3.79e-01 91.5% 89.7%
3472007 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 46.0 4.12e-01 100.0% 97.9%