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OQ832096.1__WJZ48889.1__X__00038
Bact-VirOQ832096.1__WJZ48889.1__X__00038
Identity
- Accession:
- OQ832096 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 247-333
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13362.13 best | Toprim_3 | 35.3 | 1.80e-08 | 89.7% | 71.6% |
| PF13662.13 | Toprim_4 | 26.8 | 6.80e-06 | 89.7% | 84.3% |
CATH (91)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6tg6A01 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.79 | 62.0 | 5.86e-01 | 88.5% | 70.2% |
| 7v58A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.76 | 65.0 | 4.70e-01 | 93.1% | 36.0% |
| 2n3zA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.74 | 58.0 | 5.59e-01 | 92.0% | 73.7% |
| 3pdiA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.73 | 62.0 | 5.11e-01 | 92.0% | 66.2% |
| 4q9aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.72 | 61.0 | 4.54e-01 | 92.0% | 75.8% |
| 4k7jA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.71 | 60.0 | 4.46e-01 | 93.1% | 65.9% |
| 2b7nA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 49.0 | 4.10e-01 | 100.0% | 42.5% |
| 1ivnA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.70 | 59.0 | 4.68e-01 | 93.1% | 58.4% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.70 | 58.0 | 5.42e-01 | 92.0% | 73.6% |
| 2xadA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.70 | 59.0 | 4.21e-01 | 93.1% | 68.7% |
| 2w9xA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.70 | 59.0 | 4.36e-01 | 93.1% | 80.4% |
| 2waaA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.70 | 59.0 | 4.46e-01 | 93.1% | 81.1% |
| 3bh0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 60.0 | 4.17e-01 | 95.4% | 46.8% |
| 3lufB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 59.0 | 5.17e-01 | 92.0% | 63.5% |
| 2rdmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 60.0 | 5.31e-01 | 94.3% | 66.1% |
| 2xdqB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.69 | 61.0 | 5.06e-01 | 95.4% | 69.4% |
| 5bjuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.69 | 57.0 | 3.98e-01 | 93.1% | 40.3% |
| 3hdvB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 59.0 | 5.14e-01 | 93.1% | 63.5% |
| 4h08A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.69 | 61.0 | 4.69e-01 | 100.0% | 74.5% |
| 2vptA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.69 | 58.0 | 4.41e-01 | 92.0% | 76.6% |
| 1i24A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.69 | 56.0 | 4.21e-01 | 93.1% | 60.6% |
| 4u63A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 58.0 | 4.63e-01 | 93.1% | 70.1% |
| 7zs9401 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.68 | 56.0 | 4.18e-01 | 89.7% | 81.6% |
| 1a9yA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.68 | 57.0 | 4.31e-01 | 92.0% | 46.2% |
| 3getA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.68 | 58.0 | 4.28e-01 | 93.1% | 37.3% |
| 4inaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.68 | 57.0 | 4.30e-01 | 89.7% | 52.6% |
| 4j8lA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.68 | 58.0 | 4.13e-01 | 92.0% | 32.7% |
| 2w0mA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 56.0 | 4.21e-01 | 92.0% | 50.5% |
| 3ot4A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.67 | 56.0 | 4.31e-01 | 92.0% | 74.2% |
| 3aonB00 | 3.40.50.10580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ATPase, V1 complex, subunit F | 0.67 | 53.0 | 5.13e-01 | 94.3% | 75.0% |
| 2b8eB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.67 | 51.0 | 4.55e-01 | 93.1% | 57.3% |
| 5ul3A01 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.67 | 56.0 | 4.61e-01 | 92.0% | 62.8% |
| 3lqyA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.67 | 56.0 | 4.39e-01 | 93.1% | 73.8% |
| 2hsjD00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.67 | 59.0 | 4.48e-01 | 100.0% | 71.5% |
| 4qqrB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 55.0 | 3.96e-01 | 93.1% | 34.7% |
| 1cr2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 56.0 | 4.10e-01 | 93.1% | 49.8% |
| 4tqgA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 55.0 | 3.88e-01 | 94.3% | 41.8% |
| 3hdgA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 54.0 | 4.79e-01 | 92.0% | 62.1% |
| 4xvhA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.66 | 55.0 | 4.12e-01 | 93.1% | 82.4% |
| 4ycsA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 57.0 | 5.06e-01 | 94.3% | 72.4% |
| 1sr8A03 | 3.40.50.10720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CbiD-like domains | 0.66 | 55.0 | 5.49e-01 | 100.0% | 88.9% |
| 7s6eA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 53.0 | 4.70e-01 | 92.0% | 69.4% |
| 4cqmG00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 54.0 | 4.05e-01 | 92.0% | 46.4% |
| 4a8jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 57.0 | 4.03e-01 | 97.7% | 45.1% |
| 2vbiA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.65 | 54.0 | 4.24e-01 | 92.0% | 44.3% |
| 2q3fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 53.0 | 4.27e-01 | 92.0% | 86.6% |
| 1bifA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 55.0 | 4.16e-01 | 93.1% | 87.4% |
| 2yfkA01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.65 | 54.0 | 4.23e-01 | 93.1% | 46.6% |
| 3cs3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 53.0 | 4.60e-01 | 92.0% | 67.4% |
| 2i4rB00 | 3.40.50.10580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ATPase, V1 complex, subunit F | 0.64 | 53.0 | 5.52e-01 | 93.1% | 97.5% |
| 1pzxB01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.64 | 56.0 | 5.00e-01 | 96.6% | 68.9% |
| 3t1oA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 53.0 | 4.16e-01 | 93.1% | 66.1% |
| 4gx0B04 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 54.0 | 4.71e-01 | 93.1% | 85.5% |
| 3r7wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 52.0 | 4.20e-01 | 93.1% | 65.4% |
| 2j48A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 4.83e-01 | 93.1% | 68.9% |
| 3fd0A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.63 | 52.0 | 4.00e-01 | 93.1% | 47.2% |
| 2vk1A01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.63 | 52.0 | 4.12e-01 | 92.0% | 43.9% |
| 6arhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 57.0 | 3.88e-01 | 100.0% | 31.7% |
| 4c6sA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.63 | 52.0 | 4.51e-01 | 94.3% | 81.7% |
| 2i71A01 | 3.40.50.10640 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like | 0.63 | 52.0 | 3.91e-01 | 93.1% | 72.2% |
| 3u37A02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.63 | 52.0 | 3.84e-01 | 94.3% | 70.2% |
| 2pyyA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 47.0 | 4.64e-01 | 92.0% | 76.1% |
| 5c54G00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 56.0 | 3.80e-01 | 100.0% | 30.3% |
| 3dhuA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 49.0 | 3.25e-01 | 100.0% | 21.3% |
| 1b93B00 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.62 | 51.0 | 4.36e-01 | 93.1% | 72.2% |
| 2aamC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 54.0 | 3.79e-01 | 98.9% | 57.3% |
| 1w8gA00 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.61 | 55.0 | 4.08e-01 | 100.0% | 51.8% |
| 4nnaA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 55.0 | 3.70e-01 | 100.0% | 35.7% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.61 | 52.0 | 3.74e-01 | 96.6% | 51.3% |
| 3geeA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 50.0 | 4.47e-01 | 93.1% | 78.9% |
| 2xdqA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.61 | 53.0 | 4.64e-01 | 98.9% | 78.7% |
| 6xl1A01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.60 | 48.0 | 4.11e-01 | 92.0% | 59.4% |
| 4w5uB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 54.0 | 3.67e-01 | 100.0% | 52.1% |
| 4o1eB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.59 | 52.0 | 3.73e-01 | 100.0% | 34.1% |
| 3ab8A00 | 3.40.50.12370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 50.0 | 3.49e-01 | 90.8% | 33.0% |
| 3dg3A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.59 | 51.0 | 3.66e-01 | 100.0% | 32.9% |
| 2nlyA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.59 | 51.0 | 3.88e-01 | 98.9% | 52.8% |
| 3bzcA03 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.59 | 47.0 | 4.24e-01 | 90.8% | 69.5% |
| 2nytD00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.58 | 45.0 | 3.58e-01 | 82.8% | 67.0% |
| 5b7yA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.58 | 52.0 | 3.68e-01 | 100.0% | 51.7% |
| 6ksyA01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.58 | 50.0 | 3.58e-01 | 98.9% | 53.6% |
| 3e1sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 48.0 | 3.66e-01 | 93.1% | 38.2% |
| 6oibA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 43.0 | 3.65e-01 | 83.9% | 53.6% |
| 2dskA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 49.0 | 3.40e-01 | 100.0% | 45.3% |
| 4v19S00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.55 | 46.0 | 4.04e-01 | 96.6% | 85.3% |
| 3aljA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 45.0 | 3.45e-01 | 92.0% | 56.7% |
| 7d73E01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.55 | 44.0 | 3.29e-01 | 89.7% | 35.0% |
| 3gg7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 45.0 | 3.36e-01 | 100.0% | 34.2% |
| 3wqlA01 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.53 | 47.0 | 3.44e-01 | 100.0% | 51.6% |
| 2cvbA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 45.0 | 3.58e-01 | 98.9% | 50.3% |
| 4jc0A03 | 3.30.750.200 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.52 | 44.0 | 4.03e-01 | 96.6% | 88.3% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4617834 | 2006.1.3.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 | 0.95 | 92.0 | 6.99e-01 | 100.0% | 53.7% |
| 3511261 | 2006.1.3.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 | 0.95 | 91.0 | 7.61e-01 | 100.0% | 64.4% |
| 3948019 | 2006.1.3.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 | 0.93 | 87.0 | 7.75e-01 | 100.0% | 73.9% |
| 3948961 | 2006.1.3.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 | 0.83 | 78.0 | 6.76e-01 | 100.0% | 69.6% |
| 4803443 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.80 | 64.0 | 5.74e-01 | 90.8% | 62.0% |
| None | — | 0.80 | 65.0 | 5.81e-01 | 92.0% | 63.3% | |
| 4653529 | 2006.1.3.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 | 0.79 | 65.0 | 5.97e-01 | 92.0% | 69.1% |
| 5003470 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.76 | 69.0 | 6.65e-01 | 100.0% | 90.9% |
| 4938784 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.76 | 69.0 | 4.98e-01 | 100.0% | 58.7% |
| 4956959 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.75 | 68.0 | 4.89e-01 | 100.0% | 57.1% |
| 4063584 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.74 | 63.0 | 4.86e-01 | 92.0% | 53.2% |
| 4185535 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.74 | 62.0 | 5.75e-01 | 92.0% | 71.8% |
| 4855623 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.73 | 62.0 | 4.80e-01 | 92.0% | 59.6% |
| 4887824 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.73 | 61.0 | 4.97e-01 | 89.7% | 64.5% |
| 5047918 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.73 | 62.0 | 5.43e-01 | 93.1% | 85.4% |
| 5030356 | 2003.1.5.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase | 0.73 | 62.0 | 4.08e-01 | 93.1% | 32.9% |
| 4190464 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.73 | 63.0 | 5.43e-01 | 93.1% | 62.3% |
| 1298650 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.72 | 61.0 | 4.54e-01 | 92.0% | 75.8% |
| 4929976 | 2007.1.14.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › CbiX | 0.72 | 61.0 | 5.48e-01 | 93.1% | 83.3% |
| 3966299 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.71 | 60.0 | 5.24e-01 | 93.1% | 61.5% |
| 5074979 | 2006.1.3.9 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › OLD-like_TOPRIM | 0.71 | 61.0 | 4.91e-01 | 95.4% | 58.2% |
| 5036881 | 2007.24.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like | 0.70 | 58.0 | 6.07e-01 | 92.0% | 96.2% |
| 4771626 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.70 | 58.0 | 5.42e-01 | 92.0% | 73.6% |
| 4443421 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.70 | 57.0 | 5.36e-01 | 93.1% | 73.3% |
| 3783746 | 2003.1.1.141 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Polysacc_synt_2, GDP_Man_Dehyd | 0.70 | 59.0 | 3.94e-01 | 94.3% | 35.1% |
| 5042371 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.70 | 59.0 | 4.79e-01 | 93.1% | 68.5% |
| 5010363 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.70 | 57.0 | 5.93e-01 | 93.1% | 96.2% |
| 1156537 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.70 | 59.0 | 4.46e-01 | 93.1% | 81.1% |
| 3967473 | 2005.2.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF › DUF218 | 0.70 | 58.0 | 4.41e-01 | 90.8% | 64.5% |
| 5060872 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.69 | 56.0 | 5.86e-01 | 92.0% | 96.2% |
| 167873 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.69 | 58.0 | 4.41e-01 | 92.0% | 76.6% |
| 4172902 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.69 | 61.0 | 4.89e-01 | 95.4% | 63.7% |
| 4973822 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.69 | 56.0 | 5.39e-01 | 93.1% | 77.0% |
| 4616971 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.69 | 60.0 | 4.93e-01 | 95.4% | 65.8% |
| 3366498 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.68 | 59.0 | 4.90e-01 | 96.6% | 59.4% |
| 4476434 | 2007.6.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C | 0.68 | 57.0 | 4.62e-01 | 93.1% | 53.0% |
| 4061398 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.67 | 57.0 | 4.22e-01 | 93.1% | 56.9% |
| 4976183 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.67 | 57.0 | 4.30e-01 | 93.1% | 91.4% |
| 4944374 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.67 | 51.0 | 4.48e-01 | 93.1% | 54.6% |
| 4977255 | 2007.22.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Methyl-viologen reducing hydrogenase subunit D › Methyl-viologen reducing hydrogenase subunit D | 0.67 | 58.0 | 5.16e-01 | 96.6% | 81.6% |
| 4933350 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 58.0 | 5.11e-01 | 96.6% | 68.8% |
| 3732910 | 7574.1.1.7 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N | 0.67 | 56.0 | 4.26e-01 | 92.0% | 44.5% |
| 4978056 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.66 | 59.0 | 4.50e-01 | 100.0% | 82.8% |
| 3315238 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.66 | 55.0 | 3.87e-01 | 94.3% | 34.0% |
| 5024299 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.66 | 54.0 | 3.90e-01 | 90.8% | 56.8% |
| 169313 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.65 | 55.0 | 3.78e-01 | 96.6% | 37.1% |
| 3706436 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.65 | 54.0 | 4.16e-01 | 93.1% | 63.8% |
| 1621265 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.65 | 56.0 | 3.78e-01 | 100.0% | 72.0% |
| 4382601 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.65 | 57.0 | 4.31e-01 | 100.0% | 77.3% |
| 3294540 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.65 | 54.0 | 3.51e-01 | 93.1% | 29.2% |
| 4888031 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.65 | 55.0 | 4.25e-01 | 92.0% | 55.3% |
| 5036276 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.65 | 53.0 | 5.54e-01 | 93.1% | 97.5% |
| 3595822 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 54.0 | 4.12e-01 | 94.3% | 67.4% |
| 4970050 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.65 | 57.0 | 4.33e-01 | 100.0% | 75.3% |
| 5041951 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.64 | 53.0 | 5.06e-01 | 93.1% | 76.2% |
| 5054364 | 7515.1.1.8 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Metalloenzyme | 0.64 | 56.0 | 4.10e-01 | 98.9% | 40.4% |
| None | — | 0.64 | 51.0 | 4.15e-01 | 92.0% | 45.5% | |
| 4928638 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.64 | 51.0 | 4.34e-01 | 90.8% | 52.1% |
| 4530682 | 7543.1.1.2 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS | 0.64 | 55.0 | 4.80e-01 | 94.3% | 83.8% |
| 5066006 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.64 | 53.0 | 4.91e-01 | 93.1% | 71.8% |
| 4475046 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.64 | 56.0 | 4.49e-01 | 97.7% | 61.1% |
| 4600425 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.64 | 53.0 | 4.41e-01 | 92.0% | 58.7% |
| 4096365 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.63 | 53.0 | 4.45e-01 | 92.0% | 70.7% |
| 5025533 | 7550.1.1.1 ↗ | a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase | 0.63 | 51.0 | 4.84e-01 | 92.0% | 74.3% |
| 4464929 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.63 | 56.0 | 4.38e-01 | 98.9% | 57.8% |
| 4983232 | 7601.1.1.2 ↗ | a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 | 0.63 | 52.0 | 3.71e-01 | 93.1% | 58.5% |
| 4571237 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.62 | 55.0 | 4.14e-01 | 100.0% | 79.8% |
| 3590077 | 7543.1.1.2 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS | 0.62 | 50.0 | 4.40e-01 | 89.7% | 78.5% |
| 4308615 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.62 | 51.0 | 4.49e-01 | 92.0% | 66.7% |
| 5025607 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.62 | 49.0 | 3.94e-01 | 88.5% | 56.8% |
| 4093458 | 7543.1.1.2 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS | 0.61 | 51.0 | 4.35e-01 | 93.1% | 71.7% |
| 4171807 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.61 | 50.0 | 4.19e-01 | 93.1% | 57.5% |
| 5052548 | 2007.1.11.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains | 0.60 | 49.0 | 4.18e-01 | 89.7% | 86.9% |
| 3388813 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.60 | 51.0 | 4.54e-01 | 97.7% | 87.7% |
| 4632327 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.60 | 49.0 | 4.22e-01 | 92.0% | 62.8% |
| 4292358 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.59 | 49.0 | 4.06e-01 | 93.1% | 61.2% |
| 4949218 | 898.1.1.1 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › Ribosomal_L1 | 0.59 | 47.0 | 3.65e-01 | 93.1% | 37.5% |
| 4156472 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.59 | 49.0 | 4.14e-01 | 92.0% | 61.3% |
| 4391834 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.59 | 49.0 | 4.20e-01 | 93.1% | 67.1% |
| 1178646 | 2003.1.14.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace_N | 0.59 | 49.0 | 4.03e-01 | 94.3% | 50.9% |
| 4945935 | 2007.25.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domain in Ribosomal protein L1 › Rossmann-like domain in Ribosomal protein L1 › Ribosomal_L1 | 0.58 | 46.0 | 4.57e-01 | 93.1% | 82.1% |
| 1489882 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.58 | 52.0 | 3.70e-01 | 100.0% | 33.1% |
| 3024596 | 2007.25.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domain in Ribosomal protein L1 › Rossmann-like domain in Ribosomal protein L1 › Ribosomal_L1 | 0.57 | 44.0 | 4.36e-01 | 92.0% | 83.3% |
| 4355422 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.57 | 48.0 | 3.81e-01 | 93.1% | 56.0% |
| 5052161 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.56 | 50.0 | 3.36e-01 | 100.0% | 28.5% |
| 3541131 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.56 | 45.0 | 2.86e-01 | 92.0% | 20.4% |
| 3773590 | 2004.1.1.952 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, Flavi_DEAD | 0.55 | 44.0 | 2.78e-01 | 92.0% | 20.4% |
| 3474702 | 2006.1.4.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PRORP | 0.55 | 47.0 | 3.68e-01 | 95.4% | 70.0% |
| 5060273 | 7512.1.1.32 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 | 0.55 | 46.0 | 3.67e-01 | 94.3% | 60.0% |
| 3470343 | 2002.1.1.75 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C | 0.54 | 48.0 | 3.94e-01 | 98.9% | 59.4% |
| 4998304 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.54 | 48.0 | 3.04e-01 | 100.0% | 21.6% |
| 3943513 | 2484.1.1.74 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Tex_YqgF | 0.53 | 42.0 | 3.61e-01 | 89.7% | 56.7% |
| 4980908 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 47.0 | 3.87e-01 | 100.0% | 63.2% |
D2
medium
residues 6-119
Domain cluster:
rep: NC_074751.1__YP_010774091.1__QJS24_gp37__00037__D222-314
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08707.17 best | PriCT_2 | 55.0 | 1.20e-14 | 62.3% | 97.4% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kwoA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 41.0 | 3.82e-01 | 70.2% | 96.0% |
| 2fji102 | 1.10.357.70 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Exocyst complex component Sec6, C-terminal domain | 0.60 | 39.0 | 3.30e-01 | 98.2% | 38.4% |
| 3bjdA02 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.57 | 43.0 | 3.46e-01 | 79.8% | 78.6% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.53 | 43.0 | 3.86e-01 | 100.0% | 63.2% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.52 | 44.0 | 3.87e-01 | 100.0% | 61.4% |
| 5domA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.51 | 35.0 | 3.88e-01 | 95.6% | 92.2% |
D3
medium
residues 143-234
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tcaA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 35.0 | 3.59e-01 | 83.7% | 60.0% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 39.0 | 4.01e-01 | 97.8% | 72.1% |
| 1eqnB01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.56 | 51.0 | 4.57e-01 | 100.0% | 79.4% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 33.0 | 3.72e-01 | 83.7% | 82.1% |
| 6kwzA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 40.0 | 3.93e-01 | 78.3% | 83.7% |
| 4ekuA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 35.0 | 3.32e-01 | 84.8% | 53.8% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 3.96e-01 | 84.8% | 80.7% |
| 2gtjA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 30.0 | 3.24e-01 | 87.0% | 67.6% |
| 5utkA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 33.0 | 3.46e-01 | 96.7% | 71.1% |
| 8h68A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.51 | 39.0 | 2.94e-01 | 81.5% | 54.5% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3511263 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.85 | 48.0 | 4.81e-01 | 100.0% | 55.8% |
| 4111345 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.84 | 48.0 | 5.30e-01 | 100.0% | 70.7% |
| 6450 | 4023.1.1.2 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › Helic-prim_T7_N | 0.65 | 39.0 | 4.32e-01 | 100.0% | 75.3% |
| 3437270 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 36.0 | 3.94e-01 | 82.6% | 77.1% |
| 3406258 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.58 | 35.0 | 3.55e-01 | 83.7% | 60.0% |
| 3888093 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 37.0 | 3.80e-01 | 96.7% | 66.7% |
| 3483496 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 29.0 | 3.65e-01 | 75.0% | 95.6% |
| 3586917 | 2004.1.2.2 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain › PEPCK_ATP | 0.55 | 42.0 | 2.99e-01 | 84.8% | 41.3% |
| 3987692 | 822.3.1.1 ↗ | a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 | 0.55 | 32.0 | 3.56e-01 | 71.7% | 74.3% |
| 4431937 | 4023.1.1.1 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N | 0.54 | 50.0 | 4.29e-01 | 100.0% | 73.6% |
| 4858277 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 36.0 | 3.70e-01 | 96.7% | 73.9% |
| 4998125 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.51 | 44.0 | 3.26e-01 | 100.0% | 89.5% |
| 3274993 | 10.12.1.52 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_8 | 0.51 | 40.0 | 2.75e-01 | 87.0% | 68.6% |
| 4386724 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.51 | 35.0 | 3.30e-01 | 70.7% | 88.2% |
| 4972257 | 304.104.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sulfolobus fructose-1,6-bisphosphatase-like › Sulfolobus fructose-1,6-bisphosphatase-like › FBPase_3 | 0.50 | 43.0 | 2.82e-01 | 92.4% | 52.0% |
| 3421596 | 10.12.1.31 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_5 | 0.50 | 37.0 | 3.46e-01 | 79.3% | 90.7% |