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OQ832096.1__WJZ48894.1__X__00043

Bact-Vir

OQ832096.1__WJZ48894.1__X__00043

Identity

Accession:
OQ832096 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-60
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kr6A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.67 49.0 3.37e-01 78.4% 26.3%
2kx2A00 3.30.780.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › 0.67 43.0 3.55e-01 78.4% 35.4%
1tuaA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.66 50.0 4.31e-01 84.3% 57.1%
4m1xD00 3.30.1360.240 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.65 49.0 4.42e-01 82.4% 62.5%
3pieA02 3.30.1370.250 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.65 49.0 4.02e-01 88.2% 43.0%
2dgrA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.65 47.0 4.40e-01 80.4% 71.6%
1v95A01 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.64 47.0 3.74e-01 82.4% 79.3%
2jvzA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.63 47.0 4.13e-01 80.4% 66.3%
4ombA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 52.0 3.82e-01 100.0% 55.8%
3u1kB04 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.62 45.0 4.08e-01 80.4% 62.5%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.60 43.0 4.26e-01 100.0% 70.9%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.60 48.0 3.98e-01 100.0% 58.6%
1vigA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.60 44.0 4.02e-01 80.4% 69.0%
2q7eA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.59 42.0 2.90e-01 80.4% 36.3%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.59 44.0 3.34e-01 88.2% 91.7%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.58 42.0 3.15e-01 78.4% 33.1%
1sqgA03 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.57 40.0 3.95e-01 78.4% 69.0%
2yweA04 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 41.0 3.26e-01 78.4% 36.0%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.57 48.0 4.26e-01 100.0% 97.5%
3e54A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 39.0 2.89e-01 82.4% 23.9%
2dy1A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.57 39.0 3.59e-01 76.5% 59.2%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.56 39.0 2.79e-01 78.4% 21.5%
4aukA01 3.30.70.2810 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 41.0 3.65e-01 84.3% 58.2%
4qmfB01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.55 40.0 3.54e-01 82.4% 56.1%
2nq2D00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 41.0 2.74e-01 88.2% 26.6%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 3.19e-01 72.5% 83.1%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.54 39.0 3.44e-01 80.4% 63.9%
2re1A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 38.0 3.48e-01 78.4% 56.8%
3qx3B03 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.54 38.0 3.20e-01 78.4% 48.0%
6guvA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.54 35.0 2.63e-01 96.1% 25.4%
1s79A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 38.0 3.23e-01 82.4% 45.6%
2hqyA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 36.0 2.84e-01 84.3% 29.2%
4fhdA02 3.80.30.30 Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › 0.53 43.0 2.92e-01 100.0% 75.3%
1sjqA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 41.0 3.66e-01 100.0% 92.0%
3gr5A02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.52 37.0 3.46e-01 78.4% 63.2%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 36.0 3.01e-01 82.4% 36.0%
4pwuC00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 37.0 3.35e-01 80.4% 56.4%
1jqgA01 3.30.70.340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like 0.52 36.0 3.09e-01 78.4% 42.9%
3upsA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.52 37.0 2.98e-01 76.5% 46.3%
3duzA03 6.10.250.3010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.51 35.0 3.14e-01 72.5% 49.4%
2jheA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 42.0 3.65e-01 92.2% 90.1%
3znuA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.51 37.0 3.21e-01 84.3% 95.7%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 39.0 3.30e-01 100.0% 66.7%
2v8pA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.51 36.0 2.90e-01 78.4% 75.7%
2g0iA00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.50 36.0 2.88e-01 78.4% 56.8%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.50 34.0 3.19e-01 72.5% 79.7%
3ofgB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.50 35.0 3.15e-01 80.4% 63.2%
2j0wA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.50 35.0 3.20e-01 80.4% 51.9%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3407747 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.67 51.0 4.30e-01 84.3% 87.8%
3322592 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.67 49.0 4.47e-01 80.4% 68.6%
5004176 256.1.1.0 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.66 48.0 4.78e-01 80.4% 83.6%
4972219 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.62 44.0 4.01e-01 78.4% 56.0%
5015409 327.11.2.83 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DUF2096_C 0.61 44.0 4.35e-01 80.4% 72.7%
4221576 327.11.2.38 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_SLS1_1 0.61 44.0 4.13e-01 78.4% 69.2%
4993815 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.61 43.0 3.75e-01 78.4% 48.2%
3915000 327.11.2.20 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › BICC1_KH 0.60 45.0 4.09e-01 82.4% 64.3%
4439160 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.60 43.0 4.01e-01 78.4% 69.2%
5039231 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.60 42.0 3.96e-01 78.4% 60.0%
4937023 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.59 41.0 3.49e-01 78.4% 43.0%
2323881 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.59 41.0 4.11e-01 72.5% 70.4%
4993482 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.59 41.0 3.78e-01 78.4% 56.0%
3698585 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.59 43.0 3.83e-01 82.4% 53.8%
3220398 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.59 42.0 4.03e-01 78.4% 73.3%
4297454 306.3.1.2 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 0.58 42.0 3.13e-01 78.4% 31.9%
5009377 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.58 42.0 2.70e-01 78.4% 14.5%
5028313 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.58 41.0 3.68e-01 78.4% 55.0%
3976762 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.58 43.0 3.90e-01 86.3% 57.3%
4997780 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.58 40.0 3.64e-01 78.4% 53.8%
3595272 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 42.0 3.43e-01 80.4% 41.0%
4945726 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.57 40.0 2.50e-01 74.5% 22.0%
4036794 304.120.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX 0.57 42.0 3.78e-01 82.4% 60.0%
3184662 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.57 41.0 3.81e-01 80.4% 68.6%
4069972 304.120.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX 0.57 41.0 3.72e-01 80.4% 58.7%
4028872 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.56 39.0 2.43e-01 78.4% 10.6%
3968480 304.120.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX 0.56 41.0 3.72e-01 82.4% 60.0%
3942500 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 41.0 4.05e-01 80.4% 78.2%
3602137 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.56 40.0 3.33e-01 78.4% 43.2%
3781763 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.56 40.0 3.38e-01 82.4% 45.0%
4667947 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.56 40.0 3.71e-01 80.4% 62.9%
2982277 327.16.1.10 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 0.55 38.0 3.67e-01 78.4% 61.9%
4943445 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.55 39.0 3.54e-01 78.4% 57.3%
4959713 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 38.0 3.09e-01 72.5% 63.9%
4218542 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.55 38.0 3.67e-01 78.4% 63.3%
3657246 101.1.2.525 alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.55 45.0 3.84e-01 100.0% 71.6%
5049638 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 39.0 3.83e-01 80.4% 75.0%
3603717 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.54 38.0 3.43e-01 78.4% 52.5%
3765790 327.11.2.42 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_6 0.54 38.0 3.61e-01 80.4% 67.1%
4997590 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.54 37.0 2.41e-01 78.4% 12.6%
4992385 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.54 38.0 3.57e-01 78.4% 61.4%
4006693 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.54 40.0 3.50e-01 84.3% 80.0%
3164240 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.53 37.0 3.45e-01 74.5% 55.7%
5041315 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 36.0 2.92e-01 70.6% 44.0%
4464001 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.53 37.0 3.10e-01 82.4% 36.5%
4995776 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.51e-01 80.4% 58.6%
4603561 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.53 43.0 3.83e-01 98.0% 88.7%
4443109 304.120.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX 0.53 37.0 3.46e-01 82.4% 60.0%
4377282 310.1.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N 0.52 37.0 3.22e-01 82.4% 87.4%
3659885 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.52 33.0 2.70e-01 100.0% 33.7%
4569207 304.120.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX 0.52 38.0 3.55e-01 84.3% 65.7%
3181300 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 45.0 3.32e-01 100.0% 49.3%
4618298 310.1.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N 0.52 36.0 3.02e-01 80.4% 46.4%
4987047 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 35.0 2.79e-01 72.5% 57.5%
5082046 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.46e-01 98.0% 63.0%
3355197 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 37.0 3.11e-01 82.4% 55.0%
3985269 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.51 35.0 3.21e-01 74.5% 52.0%
3695413 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.51 36.0 3.03e-01 80.4% 51.0%
1265898 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.50 36.0 2.76e-01 76.5% 47.5%
3680963 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.50 36.0 3.41e-01 84.3% 72.9%
3952422 101.1.2.642 alpha arrays › HTH › HTH › winged helix domain › DUF3631 0.50 35.0 3.07e-01 78.4% 70.0%