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OQ832096.1__WJZ48901.1__X__00050

Bact-Vir

OQ832096.1__WJZ48901.1__X__00050

Identity

Accession:
OQ832096 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Halomonas_phage_vB_HmeY_H4907

TaxID: 3056163

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-77
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 47.0 4.25e-01 79.0% 50.0%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 44.0 4.82e-01 87.1% 81.6%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 50.0 3.99e-01 87.1% 70.8%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 43.0 4.22e-01 79.0% 66.7%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 50.0 4.25e-01 88.7% 75.0%
4kcaA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 44.0 2.68e-01 96.8% 12.0%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 42.0 4.16e-01 80.6% 65.2%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 41.0 4.02e-01 79.0% 62.7%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.60 50.0 4.00e-01 100.0% 89.3%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.59 50.0 3.56e-01 95.2% 47.1%
2jz6A01 2.30.170.40 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 0.59 40.0 4.32e-01 82.3% 88.0%
3cetB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 51.0 4.22e-01 98.4% 70.0%
5mteA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.58 50.0 3.89e-01 96.8% 69.3%
3deeA02 3.90.930.50 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.57 42.0 3.53e-01 80.6% 43.9%
4i8iA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.57 48.0 3.23e-01 98.4% 31.3%
3buxB03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 45.0 4.12e-01 91.9% 70.9%
4guzA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.56 44.0 3.17e-01 100.0% 29.3%
3pfsB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 41.0 3.38e-01 82.3% 100.0%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 41.0 4.28e-01 91.9% 86.2%
1oe8A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 39.0 3.68e-01 77.4% 97.5%
2i00A03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.54 35.0 3.15e-01 95.2% 43.2%
4p79A00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.53 41.0 3.10e-01 90.3% 81.8%
1nubA01 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.53 34.0 3.17e-01 77.4% 50.0%
1nbwA04 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 45.0 3.62e-01 100.0% 81.8%
4v1ap00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 37.0 3.30e-01 77.4% 87.6%
4z3xA03 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.52 41.0 3.07e-01 93.5% 90.3%
4ihuA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 46.0 3.23e-01 100.0% 93.5%
2zgyA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 35.0 2.56e-01 79.0% 24.4%
7prrB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 42.0 3.21e-01 96.8% 65.7%
5d1oA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.51 38.0 3.61e-01 80.6% 79.5%
1v57A03 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 37.0 2.92e-01 80.6% 90.3%
5yrzA01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 39.0 3.36e-01 85.5% 88.6%
8an5A01 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.50 42.0 3.06e-01 96.8% 68.2%
6hdrA01 3.30.10.30 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › DYRK 0.50 28.0 2.78e-01 85.5% 43.5%
6x5vA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 40.0 3.63e-01 96.8% 100.0%
2d7vB00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.50 35.0 2.76e-01 77.4% 90.2%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.72 47.0 4.56e-01 87.1% 60.0%
3926118 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.71 45.0 4.63e-01 91.9% 66.7%
3238035 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.69 50.0 5.44e-01 83.9% 96.0%
3787501 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.67 55.0 4.21e-01 88.7% 79.3%
5023580 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 42.0 4.20e-01 77.4% 60.0%
3669779 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.65 53.0 4.07e-01 88.7% 60.0%
5001380 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 40.0 3.70e-01 75.8% 48.8%
5033670 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.64 41.0 2.87e-01 75.8% 19.7%
3975472 1104.1.1.1 ↗ a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 0.64 54.0 4.11e-01 96.8% 49.7%
3942738 295.1.1.29 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ 0.64 55.0 4.21e-01 100.0% 95.5%
3890928 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.63 55.0 3.96e-01 100.0% 88.3%
5000042 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.63 50.0 3.50e-01 88.7% 68.8%
4997916 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.63 50.0 3.74e-01 88.7% 88.1%
4968816 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.63 47.0 4.07e-01 87.1% 52.6%
3230113 4.1.1.315 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.62 47.0 2.89e-01 82.3% 28.1%
3744517 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.62 51.0 4.13e-01 91.9% 71.7%
4981192 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 53.0 3.57e-01 100.0% 31.0%
3221529 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 43.0 3.41e-01 79.0% 41.4%
4944415 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.59 49.0 3.68e-01 95.2% 75.9%
3619075 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.59 51.0 4.24e-01 96.8% 64.5%
None — 0.59 49.0 3.64e-01 96.8% 74.3%
4026251 2492.1.1.8 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 0.58 41.0 2.93e-01 100.0% 24.2%
3743354 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 42.0 3.68e-01 79.0% 50.0%
3912134 2485.1.1.69 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF4174 0.58 39.0 3.10e-01 100.0% 33.1%
3811281 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 43.0 3.91e-01 83.9% 58.8%
3889863 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.57 50.0 4.09e-01 100.0% 65.0%
185160 3551.1.1.1 ↗ alpha arrays › Pfam family PF09836 C-terminal domain › Pfam family PF09836 C-terminal domain › Pfam family PF09836 C-terminal domain › NGO1945_C 0.57 42.0 3.56e-01 80.6% 45.0%
4642900 331.5.1.1 ↗ a+b two layers › TBP-like › TT1751-like › TT1751-like › DUF302 0.57 46.0 3.85e-01 95.2% 80.0%
4273211 108.1.1.115 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30551 0.57 39.0 2.52e-01 72.6% 51.0%
4962375 2484.1.1.49 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N 0.57 45.0 3.56e-01 88.7% 82.2%
3609492 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.57 47.0 3.78e-01 100.0% 65.0%
3230943 2003.1.2.65 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like, Pyr_redox_3 0.56 48.0 2.85e-01 100.0% 50.1%
3402998 386.1.1.300 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30733 0.55 40.0 3.97e-01 77.4% 81.5%
3704328 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.55 45.0 4.17e-01 95.2% 90.4%
4267419 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.54 38.0 2.57e-01 100.0% 18.9%
3633556 2485.2.1.0 ↗ a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain 0.54 38.0 2.92e-01 75.8% 85.8%
4933497 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 45.0 3.77e-01 93.5% 73.3%
3783976 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 41.0 3.59e-01 82.3% 97.8%
5053021 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.53 38.0 3.43e-01 79.0% 71.1%
3626173 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 40.0 2.51e-01 82.3% 68.6%
4180654 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.52 36.0 2.89e-01 75.8% 53.8%
3016263 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 43.0 3.94e-01 98.4% 71.1%
3701175 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 40.0 2.66e-01 90.3% 77.7%
3741825 10.12.1.12 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD 0.51 39.0 2.37e-01 82.3% 13.2%
5076192 3604.1.1.1 ↗ a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.51 36.0 3.47e-01 75.8% 94.6%
3500851 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.51 43.0 2.78e-01 98.4% 23.5%
1780243 3894.1.1.3 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M 0.50 41.0 2.73e-01 90.3% 61.1%
3898182 2485.1.1.69 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF4174 0.50 35.0 2.83e-01 100.0% 33.6%
1566733 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 42.0 3.58e-01 100.0% 88.5%
4929236 3604.1.1.1 ↗ a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.50 35.0 3.45e-01 75.8% 87.1%
1937200 301.13.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.50 42.0 3.47e-01 100.0% 91.4%