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OQ834252.1__WIR86167.1__CRP12_000036__00036
Bact-VirOQ834252.1__WIR86167.1__CRP12_000036__00036
Identity
- Accession:
- OQ834252 ↗
- Kingdom:
- phage
Quality
95.9
mean pLDDT
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-37_72-95_142-152
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xneA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.70 | 53.0 | 4.57e-01 | 81.9% | 96.5% |
| 2as0A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.64 | 47.0 | 4.76e-01 | 77.8% | 97.1% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.60 | 43.0 | 4.11e-01 | 98.6% | 66.3% |
| 5gj7A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.57 | 44.0 | 4.08e-01 | 84.7% | 100.0% |
| 3vx8A02 | 3.40.140.70 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 N-terminal domain | 0.56 | 47.0 | 3.70e-01 | 97.2% | 95.1% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.55 | 39.0 | 3.80e-01 | 76.4% | 91.7% |
| 4h5iB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 39.0 | 2.56e-01 | 79.2% | 93.6% |
| 4g79A00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.53 | 44.0 | 3.64e-01 | 93.1% | 95.5% |
| 2axwA01 | 2.60.40.1570 | Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin | 0.53 | 36.0 | 3.19e-01 | 73.6% | 81.4% |
| 3udfA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 44.0 | 2.80e-01 | 93.1% | 72.2% |
| 6l4lA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 45.0 | 3.70e-01 | 100.0% | 72.1% |
| 7jvhC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 38.0 | 2.52e-01 | 80.6% | 88.3% |
| 5z1gB01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.51 | 44.0 | 3.18e-01 | 95.8% | 75.5% |
| 4lg8A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 35.0 | 2.37e-01 | 75.0% | 86.5% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.50 | 32.0 | 3.75e-01 | 76.4% | 100.0% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.50 | 43.0 | 3.56e-01 | 97.2% | 62.4% |
| 2g5xA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.50 | 39.0 | 2.97e-01 | 84.7% | 86.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940231 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.83 | 66.0 | 5.28e-01 | 84.7% | 77.4% |
| 4013185 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 69.0 | 5.32e-01 | 91.7% | 73.3% |
| 3635966 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 66.0 | 5.59e-01 | 88.9% | 78.3% |
| 5035541 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 60.0 | 5.47e-01 | 80.6% | 100.0% |
| 4237622 | 1.1.9.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB_C | 0.69 | 53.0 | 5.68e-01 | 95.8% | 100.0% |
| 4384734 | 1.1.9.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB_C | 0.67 | 53.0 | 5.53e-01 | 98.6% | 96.9% |
| 4564336 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.67 | 51.0 | 5.40e-01 | 83.3% | 100.0% |
| 4165251 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.65 | 52.0 | 5.42e-01 | 95.8% | 100.0% |
| 3467235 | 207.1.1.171 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2, LRR_R13L1-DRL21 | 0.64 | 45.0 | 2.89e-01 | 84.7% | 15.2% |
| 4558844 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.64 | 52.0 | 5.40e-01 | 95.8% | 100.0% |
| 5010432 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.59 | 48.0 | 4.88e-01 | 90.3% | 97.1% |
| 4992195 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 44.0 | 4.64e-01 | 80.6% | 100.0% |
| 3196510 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.58 | 48.0 | 3.80e-01 | 91.7% | 65.3% |
| 3270703 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.58 | 46.0 | 3.26e-01 | 87.5% | 84.1% |
| 4052309 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.57 | 44.0 | 3.81e-01 | 83.3% | 82.6% |
| 4528584 | 101.1.12.3 ↗ | alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N | 0.56 | 47.0 | 3.57e-01 | 93.1% | 94.7% |
| 4956685 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.54 | 42.0 | 3.79e-01 | 86.1% | 86.7% |
| 4965758 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.53 | 41.0 | 3.61e-01 | 83.3% | 84.8% |
| 3713681 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.52 | 42.0 | 2.93e-01 | 87.5% | 76.7% |
| 5035565 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.52 | 41.0 | 3.60e-01 | 87.5% | 84.5% |
| 3199435 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 44.0 | 3.30e-01 | 94.4% | 90.9% |
| 2667421 | 286.1.1.5 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › CntK_N | 0.51 | 45.0 | 3.60e-01 | 100.0% | 65.8% |
| 4817094 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.51 | 44.0 | 3.88e-01 | 94.4% | 73.8% |
| 3585212 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.51 | 44.0 | 3.20e-01 | 98.6% | 79.5% |
| 3510760 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 38.0 | 2.56e-01 | 81.9% | 90.2% |
| 5054554 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.50 | 39.0 | 3.55e-01 | 84.7% | 79.0% |
| 3279848 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.50 | 42.0 | 3.34e-01 | 95.8% | 58.1% |