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OQ834252.1__WIR86168.1__CRP12_000037__00037
Bact-VirOQ834252.1__WIR86168.1__CRP12_000037__00037
Identity
- Accession:
- OQ834252 ↗
- Kingdom:
- phage
Quality
95.9
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-131
Domain cluster:
rep: IMGVR_UViG_3300009688_000628-3300009688-Ga0116176_100039164__D9-100
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05766.19 best | NinG | 96.6 | 2.40e-27 | 95.9% | 38.9% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7yuiB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 36.0 | 3.82e-01 | 82.7% | 68.2% |
| 1wimA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 36.0 | 3.72e-01 | 81.6% | 67.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3976723 | 378.1.1.28 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG | 0.92 | 83.0 | 7.53e-01 | 100.0% | 74.4% |
| 3944337 | 378.1.1.28 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG | 0.88 | 85.0 | 7.42e-01 | 100.0% | 73.3% |
| 5016552 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.74 | 57.0 | 5.50e-01 | 81.6% | 91.8% |
| 5080395 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.71 | 49.0 | 4.66e-01 | 71.4% | 64.3% |
| 3286658 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.69 | 54.0 | 4.92e-01 | 83.7% | 81.5% |
| 3913312 | 377.1.1.50 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › ZMYM4 | 0.65 | 32.0 | 4.24e-01 | 76.5% | 97.8% |
| 3685300 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.64 | 52.0 | 4.00e-01 | 86.7% | 80.0% |
| 5059323 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.64 | 50.0 | 4.40e-01 | 84.7% | 61.3% |
| 3411509 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.63 | 31.0 | 4.13e-01 | 74.5% | 100.0% |
| 3963335 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.61 | 48.0 | 4.42e-01 | 84.7% | 79.8% |
| 3964177 | 377.7.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › 82 prophage-derived uncharacterized protein ybcO › 82 prophage-derived uncharacterized protein ybcO › YbcO | 0.61 | 42.0 | 4.39e-01 | 71.4% | 83.3% |
| 4015661 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 36.0 | 3.59e-01 | 81.6% | 59.0% |
| 3590662 | 377.4.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › YlxR | 0.56 | 38.0 | 4.01e-01 | 79.6% | 76.7% |
| 3326051 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.55 | 35.0 | 3.61e-01 | 83.7% | 66.3% |
| 3431026 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.53 | 34.0 | 3.44e-01 | 82.7% | 65.3% |
| 3380766 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.53 | 35.0 | 3.49e-01 | 83.7% | 65.0% |
| 3906952 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.53 | 33.0 | 3.27e-01 | 80.6% | 58.7% |
| 3928505 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.52 | 36.0 | 4.16e-01 | 94.9% | 100.0% |
| 4474912 | 377.4.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › YlxR | 0.50 | 35.0 | 3.65e-01 | 80.6% | 78.9% |
| 3864818 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.50 | 34.0 | 2.71e-01 | 70.4% | 78.7% |