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OQ834252.1__WIR86180.1__CRP12_000049__00049

Bact-Vir

OQ834252.1__WIR86180.1__CRP12_000049__00049

Identity

Accession:
OQ834252 ↗
Kingdom:
phage

Quality

93.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Riemerella_phage_vB_RanS_CRP12

TaxID: 3043503

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-74
PDB
Domain cluster: rep: OY731433.1__CAJ1878758.1__AUSP0023_00088__00079__D43-109
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 42.0 4.66e-01 86.8% 95.8%
2dtcA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 49.0 4.16e-01 88.2% 81.0%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.59 47.0 3.34e-01 88.2% 49.5%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.22e-01 100.0% 78.1%
2i5hA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 41.0 4.12e-01 79.4% 93.1%
2kr7A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 34.0 3.66e-01 80.9% 71.9%
3v0aB04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 48.0 3.76e-01 100.0% 96.2%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.57e-01 92.6% 97.1%
3cpxA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.55 45.0 4.64e-01 100.0% 100.0%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 43.0 3.63e-01 88.2% 66.9%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 43.0 3.70e-01 88.2% 73.0%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 44.0 3.57e-01 89.7% 52.6%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 43.0 3.47e-01 88.2% 52.2%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 44.0 4.54e-01 94.1% 100.0%
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.54 45.0 3.61e-01 95.6% 85.6%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 4.57e-01 97.1% 94.1%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.54 41.0 3.81e-01 86.8% 63.6%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 4.36e-01 95.6% 96.2%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.89e-01 86.8% 77.2%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 4.40e-01 95.6% 92.0%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 4.28e-01 95.6% 93.8%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 3.97e-01 95.6% 67.6%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.54 36.0 3.07e-01 70.6% 40.5%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.54 47.0 3.77e-01 100.0% 68.3%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 38.0 4.11e-01 97.1% 98.1%
2derA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 41.0 3.86e-01 97.1% 67.8%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 45.0 4.28e-01 97.1% 84.1%
2nr4A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 41.0 3.41e-01 88.2% 77.4%
2k3aA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.53 43.0 3.91e-01 100.0% 66.0%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.64e-01 94.1% 74.2%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 44.0 4.37e-01 97.1% 97.2%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 39.0 3.81e-01 91.2% 72.5%
1ym5A01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.52 36.0 2.98e-01 73.5% 75.0%
1yloE02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.52 44.0 4.16e-01 98.5% 100.0%
2elbA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.58e-01 88.2% 70.6%
1v5uA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 39.0 3.39e-01 88.2% 74.4%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 33.0 3.40e-01 76.5% 71.4%
1x4rA01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.51 33.0 3.20e-01 89.7% 57.0%
3lxuX02 2.20.25.690 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.51 37.0 3.67e-01 80.9% 100.0%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.50 41.0 3.21e-01 92.6% 90.4%
3kl9A02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.50 40.0 4.00e-01 98.5% 85.1%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
145704 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.64 44.0 4.62e-01 91.2% 84.5%
3900190 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 50.0 4.00e-01 86.8% 62.7%
3619626 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 49.0 4.38e-01 86.8% 84.2%
3173368 220.1.1.244 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF31261 0.61 48.0 3.88e-01 88.2% 60.0%
4497776 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.61 48.0 4.58e-01 97.1% 73.8%
4270212 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.59 46.0 4.22e-01 97.1% 64.0%
3337318 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 46.0 3.70e-01 86.8% 72.9%
3939997 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.59 46.0 4.20e-01 97.1% 64.4%
3937948 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.58 46.0 3.59e-01 88.2% 58.1%
4221708 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.58 48.0 4.79e-01 95.6% 91.4%
4093836 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.57e-01 94.1% 98.3%
3198319 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 40.0 2.64e-01 77.9% 88.1%
3623169 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.56 43.0 3.75e-01 83.8% 58.1%
3183943 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 44.0 3.30e-01 88.2% 64.4%
3878278 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 44.0 3.47e-01 88.2% 69.3%
4019606 220.1.1.63 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NF1 0.56 45.0 3.77e-01 88.2% 73.9%
4575051 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.55 46.0 4.44e-01 95.6% 82.5%
3926363 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 43.0 3.65e-01 86.8% 63.5%
5032977 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 45.0 4.37e-01 95.6% 86.3%
3188394 4.8.1.22 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.55 46.0 3.90e-01 98.5% 80.0%
3712219 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.55 42.0 4.34e-01 94.1% 92.3%
3249381 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 42.0 3.28e-01 88.2% 64.8%
4025949 220.1.1.92 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.54 42.0 3.54e-01 88.2% 73.6%
1549365 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.54 45.0 4.26e-01 95.6% 88.0%
17 1.1.1.5 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease 0.54 36.0 3.03e-01 70.6% 38.9%
4015537 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 45.0 4.35e-01 95.6% 84.6%
4876565 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.54 45.0 4.13e-01 95.6% 77.8%
5077846 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.53 45.0 4.38e-01 97.1% 90.7%
4131958 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.53 44.0 3.58e-01 94.1% 100.0%
3631831 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.53 45.0 3.27e-01 97.1% 96.6%
3719817 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 3.75e-01 100.0% 84.6%
3252917 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 41.0 4.01e-01 85.3% 89.3%
3311131 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.53 41.0 3.07e-01 86.8% 47.5%
3327101 295.1.1.1 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.52 37.0 3.59e-01 79.4% 66.3%
3167351 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.52 42.0 3.92e-01 92.6% 73.9%
3937258 220.1.1.159 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_met_RdRP 0.52 44.0 3.24e-01 100.0% 87.8%
3791839 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.52 44.0 4.20e-01 98.5% 88.7%
3625965 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.51 43.0 3.97e-01 100.0% 83.2%
4197746 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.51 43.0 4.11e-01 100.0% 80.0%
4994580 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.50 41.0 2.50e-01 91.2% 85.4%