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OQ845957.1__WMU95575.1__X__00088

Bact-Vir

OQ845957.1__WMU95575.1__X__00088

Identity

Accession:
OQ845957 ↗
Kingdom:
phage

Quality

72.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-48
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.80 64.0 4.40e-01 89.4% 90.7%
1obbA00 3.90.1820.10 Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase 0.79 60.0 3.42e-01 83.0% 30.8%
4g6tB00 6.10.20.120 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.75 41.0 3.49e-01 89.4% 33.8%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.74 62.0 4.32e-01 100.0% 43.1%
3votB02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.73 60.0 3.62e-01 89.4% 27.0%
5xbfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.72 54.0 4.48e-01 100.0% 44.8%
2o3iA01 3.40.1610.10 Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain 0.70 57.0 3.73e-01 100.0% 22.5%
2dt8A01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 49.0 3.48e-01 78.7% 90.6%
4x9xA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 49.0 3.45e-01 78.7% 89.9%
4llgM00 3.10.20.510 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor 0.67 51.0 5.11e-01 100.0% 84.0%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.67 52.0 4.25e-01 91.5% 71.4%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.67 52.0 4.40e-01 100.0% 48.9%
4pofA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.66 48.0 4.78e-01 100.0% 76.0%
3ffvA00 3.40.1580.20 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein 0.65 52.0 3.55e-01 91.5% 37.6%
4gm2A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.65 47.0 3.15e-01 76.6% 39.9%
7bjkA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.65 51.0 3.86e-01 87.2% 69.9%
2kl5A00 3.50.4.20 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Uncharacterised protein DUF1027 0.64 53.0 4.18e-01 100.0% 44.5%
1r9fA01 3.30.390.180 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 0.64 52.0 4.15e-01 100.0% 51.4%
2iq1A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.63 46.0 3.05e-01 89.4% 16.7%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.63 55.0 4.37e-01 100.0% 80.9%
1kfiA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.62 48.0 3.78e-01 97.9% 97.6%
3pvlA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 45.0 3.80e-01 100.0% 42.7%
3bf5A01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.61 46.0 3.03e-01 87.2% 18.9%
3jtnB00 3.30.70.1950 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 52.0 4.19e-01 95.7% 68.9%
4mv2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 40.0 2.97e-01 100.0% 26.7%
3mz1B02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 51.0 4.04e-01 100.0% 62.9%
2i0oA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.60 45.0 2.88e-01 89.4% 16.0%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.59 44.0 4.11e-01 100.0% 63.6%
4me3A03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.59 45.0 4.40e-01 100.0% 78.2%
4gn2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 44.0 2.90e-01 87.2% 18.8%
2q0oA01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.59 47.0 3.26e-01 89.4% 49.4%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.59 47.0 3.50e-01 97.9% 84.1%
1wv3A01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.59 50.0 4.29e-01 97.9% 97.4%
2dmhA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.58 48.0 3.55e-01 100.0% 86.4%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 42.0 2.95e-01 83.0% 34.2%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.58 45.0 4.10e-01 100.0% 61.8%
2gaiA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.57 46.0 3.61e-01 100.0% 88.6%
2c60A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 47.0 4.10e-01 100.0% 94.9%
4gnxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 42.0 3.31e-01 83.0% 89.8%
5wfiA01 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.57e-01 100.0% 41.3%
2cs4A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 46.0 3.77e-01 100.0% 56.8%
2b5vA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.55 44.0 2.96e-01 100.0% 40.1%
2ckaA01 3.40.5.120 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.55 38.0 3.83e-01 100.0% 75.5%
2qnuA00 3.40.1730.10 Alpha Beta › 3-Layer(aba) Sandwich › pa0076 fold › pa0076 domain 0.53 42.0 2.92e-01 100.0% 65.9%
6l4lA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.53 46.0 3.48e-01 100.0% 94.0%
1wmhA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 43.0 3.75e-01 100.0% 95.2%
4jxuA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.52 44.0 3.24e-01 95.7% 48.1%
3fjsC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 43.0 3.42e-01 100.0% 43.9%
4n2kA01 2.60.40.1860 Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain 0.51 41.0 3.24e-01 97.9% 73.1%
7x3hA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 36.0 2.67e-01 78.7% 97.2%
2rftA02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.51 43.0 2.80e-01 100.0% 22.2%
2fi9A00 3.40.1230.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Mth938; Chain: A, › MTH938-like 0.50 39.0 3.14e-01 100.0% 83.9%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3577630 2492.1.1.0 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.72 59.0 4.41e-01 97.9% 36.9%
4940035 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.70 53.0 4.09e-01 87.2% 36.4%
4481010 857.1.1.1 a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA 0.70 50.0 4.00e-01 91.5% 37.0%
3667031 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.70 53.0 4.65e-01 85.1% 98.7%
5081134 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.68 54.0 5.11e-01 100.0% 73.3%
2496895 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 57.0 4.61e-01 100.0% 48.5%
4070661 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.67 49.0 4.50e-01 80.9% 100.0%
4996595 5103.1.1.0 a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 0.65 55.0 4.30e-01 100.0% 59.1%
5010744 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.65 54.0 5.00e-01 100.0% 96.9%
4569264 857.1.1.1 a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA 0.65 45.0 3.62e-01 87.2% 36.8%
4951473 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.64 56.0 5.12e-01 100.0% 76.2%
5067865 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.64 56.0 4.93e-01 100.0% 68.6%
3715519 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 50.0 3.34e-01 89.4% 20.5%
3258276 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.63 43.0 2.78e-01 83.0% 15.1%
5012895 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.63 54.0 5.15e-01 100.0% 83.6%
3968768 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.63 53.0 4.63e-01 100.0% 90.7%
4939739 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.62 54.0 5.08e-01 100.0% 81.4%
4969863 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.62 52.0 4.58e-01 100.0% 62.7%
4967222 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.61 53.0 4.96e-01 100.0% 80.0%
5065366 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.61 48.0 3.79e-01 97.9% 54.2%
4946842 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.61 46.0 3.07e-01 83.0% 20.0%
4013514 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.61 50.0 4.02e-01 100.0% 48.6%
4946800 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 47.0 3.42e-01 89.4% 37.4%
5050481 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 46.0 3.39e-01 89.4% 33.1%
3718648 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 46.0 3.64e-01 87.2% 95.4%
3319860 109.4.1.2173 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif 0.60 49.0 3.08e-01 100.0% 28.9%
3607139 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.60 50.0 3.20e-01 100.0% 61.2%
3879988 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.60 51.0 3.32e-01 100.0% 46.0%
5029262 4114.1.1.0 a+b two layers › PHP14-like › PHP14-like › PHP14-like 0.59 50.0 3.82e-01 100.0% 51.3%
3587660 857.1.1.1 a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA 0.59 44.0 3.30e-01 91.5% 28.6%
4216350 2010.1.1.1 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV 0.59 52.0 3.57e-01 100.0% 56.9%
3330921 109.4.1.1285 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.59 49.0 2.91e-01 100.0% 22.0%
3374645 109.4.1.1291 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.59 48.0 2.78e-01 100.0% 17.1%
3443843 109.4.1.1291 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.59 47.0 2.72e-01 100.0% 15.4%
3648991 2492.1.1.39 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › DYW_deaminase 0.58 47.0 3.63e-01 100.0% 63.8%
3321410 109.4.1.2586 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, Eplus_motif, E_motif 0.58 48.0 2.70e-01 97.9% 14.3%
4937122 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.58 50.0 4.35e-01 100.0% 97.3%
3875549 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.56 47.0 3.18e-01 100.0% 32.8%
5038375 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.55 44.0 3.07e-01 100.0% 61.5%
3252861 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.55 46.0 3.07e-01 100.0% 46.0%
3495764 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.55 46.0 3.16e-01 100.0% 57.3%
4552838 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.55 43.0 3.64e-01 97.9% 71.0%
3375945 109.4.1.619 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DYW_deaminase 0.55 45.0 3.54e-01 100.0% 60.0%
3205036 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.55 41.0 2.69e-01 89.4% 27.8%
3340161 223.1.1.1 a+b three layers › Profilin-like › sensor domains › sensor domains › PHY 0.55 40.0 2.89e-01 91.5% 36.8%
3907235 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.54 45.0 2.96e-01 100.0% 43.6%
3874516 206.1.1.74 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr 0.54 48.0 2.83e-01 100.0% 13.6%
3775907 4081.1.1.8 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT_2 0.53 42.0 2.71e-01 95.7% 18.7%
3220610 221.1.1.202 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF30122 0.53 43.0 3.59e-01 100.0% 92.6%
3831039 109.4.1.1599 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase 0.52 45.0 2.48e-01 100.0% 8.2%
3335071 109.4.1.1285 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.52 44.0 2.53e-01 100.0% 9.9%
None 0.51 45.0 3.58e-01 100.0% 58.9%
3830169 109.4.1.1383 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif 0.51 44.0 2.43e-01 100.0% 7.5%
3802249 109.4.1.1291 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.51 44.0 2.52e-01 100.0% 11.0%
4989479 1.1.2.16 beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD 0.50 43.0 3.35e-01 100.0% 65.5%
3343923 109.4.1.1156 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.50 43.0 2.68e-01 100.0% 19.4%