←Back to structures
OQ849765.1__WKV23997.1__X__00018
Bact-VirOQ849765.1__WKV23997.1__X__00018
Identity
- Accession:
- OQ849765 ↗
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Taxonomy
TaxID: 3056111
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-68
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 41.0 | 3.71e-01 | 70.0% | 90.8% |
| 4efzB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.61 | 44.0 | 2.87e-01 | 78.3% | 56.4% |
| 3qc2B00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 39.0 | 2.41e-01 | 78.3% | 95.0% |
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.53 | 35.0 | 2.94e-01 | 91.7% | 39.4% |
| 4a8jB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 3.00e-01 | 95.0% | 97.3% |
| 3p5jB01 | 2.20.25.530 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 39.0 | 3.63e-01 | 80.0% | 85.1% |
| 3mcrA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.52 | 41.0 | 3.19e-01 | 93.3% | 65.6% |
| 5hc2B00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 34.0 | 2.27e-01 | 71.7% | 19.9% |
| 6cnhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 34.0 | 3.14e-01 | 70.0% | 87.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5038315 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 44.0 | 4.76e-01 | 86.7% | 85.7% |
| 3493109 | 5.1.4.275 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_NOL10_N | 0.62 | 43.0 | 2.61e-01 | 73.3% | 79.0% |
| 3500363 | 5.1.2.41 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40_RFWD3 | 0.60 | 42.0 | 3.06e-01 | 71.7% | 75.6% |
| 3682574 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.60 | 43.0 | 2.81e-01 | 80.0% | 34.7% |
| 3995776 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.57 | 39.0 | 3.43e-01 | 70.0% | 71.1% |
| 3939294 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 41.0 | 2.54e-01 | 76.7% | 78.4% |
| 3259570 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 47.0 | 2.93e-01 | 93.3% | 28.3% |
| 3474068 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.56 | 39.0 | 2.67e-01 | 75.0% | 81.7% |
| 3259135 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 3.49e-01 | 90.0% | 93.1% |
| 3282593 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.55 | 44.0 | 3.03e-01 | 93.3% | 30.8% |
| 4962280 | 375.1.1.347 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26237 | 0.55 | 37.0 | 4.07e-01 | 70.0% | 97.8% |
| 5046254 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 36.0 | 3.84e-01 | 95.0% | 91.1% |
| 3961292 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 42.0 | 2.90e-01 | 90.0% | 84.8% |
| 5067915 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 43.0 | 2.85e-01 | 91.7% | 38.4% |
| 3390596 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.52 | 37.0 | 2.53e-01 | 76.7% | 37.8% |
| 3370941 | 295.1.1.35 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FBA_1 | 0.51 | 38.0 | 2.78e-01 | 80.0% | 53.9% |
| 3376400 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 41.0 | 2.80e-01 | 96.7% | 95.5% |
| 4167587 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.51 | 37.0 | 3.35e-01 | 78.3% | 81.2% |
| 3475813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 34.0 | 3.74e-01 | 98.3% | 97.8% |