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WLW38125.1

Arc-Vir

OQ850970__WLW38125.1__X__00014

Identity

Accession:
OQ850970 ↗
Protein ID:
WLW38125.1 ↗
Kingdom:
archaea

Quality

82.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-50
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pptA01 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.78 55.0 6.06e-01 75.0% 97.3%
3p2aA01 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.75 52.0 5.76e-01 72.9% 97.2%
2k2dA00 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.74 55.0 5.58e-01 87.5% 80.9%
2i1sA00 3.10.290.30 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › MM3350-like 0.67 57.0 3.95e-01 100.0% 62.9%
1ltlA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.67 54.0 5.43e-01 93.8% 95.9%
4me3A03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.65 52.0 5.05e-01 93.8% 96.4%
4pofA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.63 49.0 4.93e-01 91.7% 94.0%
1rmdA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.62 52.0 4.44e-01 100.0% 57.0%
2gnrA01 6.10.30.10 Special › Helix non-globular › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › 0.61 44.0 4.03e-01 87.5% 55.1%
1flmA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 47.0 3.58e-01 89.6% 46.7%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.65e-01 100.0% 96.4%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 47.0 3.44e-01 97.9% 44.4%
5dinA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 47.0 3.66e-01 100.0% 40.8%
6q61A00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.57 35.0 3.38e-01 87.5% 50.8%
1aalB00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.57 35.0 3.38e-01 87.5% 52.6%
1gwmA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.56 45.0 3.30e-01 95.8% 31.4%
1bikA00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.55 35.0 2.75e-01 87.5% 27.3%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 45.0 4.25e-01 100.0% 95.2%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 4.21e-01 87.5% 100.0%
6sjqA00 3.10.20.650 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.55 45.0 3.53e-01 97.9% 90.4%
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 42.0 2.69e-01 100.0% 25.5%
4bd9B01 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.54 34.0 3.33e-01 87.5% 55.6%
1i7dA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.54 43.0 3.23e-01 95.8% 92.2%
4d7pA00 2.60.40.730 Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain 0.54 44.0 3.64e-01 97.9% 57.3%
4as2A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 42.0 2.77e-01 95.8% 19.2%
1tocR02 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.54 33.0 3.21e-01 89.6% 50.0%
4q7qB00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.52 38.0 2.52e-01 95.8% 16.0%
7y6oA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.45e-01 95.8% 55.7%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 3.94e-01 97.9% 86.4%
2d9vA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.25e-01 95.8% 80.6%
2lvhA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.51 38.0 3.92e-01 100.0% 97.8%
7ctpA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.13e-01 95.8% 81.7%
5j3tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 41.0 3.10e-01 95.8% 62.7%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2793102 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.81 55.0 6.24e-01 70.8% 100.0%
3711290 375.10.1.0 few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha 0.80 63.0 5.86e-01 85.4% 71.7%
5065789 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.79 59.0 6.31e-01 79.2% 95.0%
4963432 4076.2.1.7 a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF5817 0.78 69.0 5.70e-01 100.0% 62.4%
3898196 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.78 61.0 5.83e-01 85.4% 94.5%
1842540 375.1.1.65 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Thio2_N 0.77 54.0 5.71e-01 75.0% 83.7%
4981108 375.1.1.331 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5817 0.77 65.0 6.65e-01 93.8% 100.0%
3606741 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 52.0 5.71e-01 77.1% 100.0%
5035898 375.1.3.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 0.76 65.0 6.08e-01 100.0% 78.3%
3438998 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 50.0 5.58e-01 70.8% 97.1%
5030549 375.1.3.1 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.73 64.0 6.18e-01 100.0% 92.7%
5034126 375.1.3.3 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 0.73 64.0 5.97e-01 100.0% 80.0%
4952531 375.1.2.1 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Desulforedoxin › Desulfoferrod_N 0.73 51.0 5.47e-01 87.5% 90.0%
4947213 375.1.3.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 0.73 63.0 6.10e-01 100.0% 87.3%
4950325 375.1.3.1 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.73 63.0 5.27e-01 100.0% 60.0%
3812959 375.1.1.201 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_20 0.72 53.0 5.60e-01 83.3% 95.0%
4966853 375.1.1.324 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF1922 0.72 62.0 5.32e-01 100.0% 81.2%
3604642 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.72 57.0 5.88e-01 89.6% 95.6%
4933437 101.1.9.83 alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM 0.72 54.0 4.15e-01 97.9% 36.1%
3609075 375.1.1.4 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RanBP 0.71 62.0 4.90e-01 100.0% 55.0%
3525671 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.71 55.0 5.18e-01 91.7% 70.0%
5075187 375.1.3.1 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.71 60.0 5.66e-01 100.0% 78.3%
3848784 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.71 55.0 4.45e-01 91.7% 44.2%
3250122 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.70 61.0 4.84e-01 100.0% 55.0%
3226989 375.1.3.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 0.70 59.0 5.75e-01 100.0% 85.5%
5078006 375.1.3.1 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.70 62.0 5.46e-01 100.0% 68.6%
5048177 375.1.3.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 0.70 60.0 5.61e-01 100.0% 85.0%
3361170 375.1.1.201 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_20 0.70 53.0 5.25e-01 87.5% 80.0%
3809044 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 51.0 5.28e-01 87.5% 86.7%
3444000 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.69 57.0 5.26e-01 95.8% 70.8%
3400742 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.69 55.0 4.76e-01 89.6% 57.3%
3455086 650.1.1.7 alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › Zn_ribbon_20 0.69 53.0 5.46e-01 97.9% 91.1%
3739776 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.69 51.0 4.54e-01 89.6% 54.7%
3212037 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.68 53.0 4.70e-01 95.8% 60.0%
3910376 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.67 58.0 4.83e-01 100.0% 57.6%
3892736 103.1.1.67 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UPF0515 0.67 49.0 5.04e-01 85.4% 88.6%
4026153 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.67 54.0 4.91e-01 95.8% 67.7%
5077070 375.1.3.1 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.67 55.0 5.19e-01 100.0% 76.7%
3913667 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.67 57.0 4.22e-01 100.0% 38.5%
3312874 375.3.1.0 few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger 0.66 51.0 5.05e-01 97.9% 84.0%
3368649 375.1.1.201 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_20 0.66 48.0 5.04e-01 85.4% 97.5%
3848188 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.66 57.0 4.22e-01 100.0% 38.4%
3396437 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.65 55.0 4.78e-01 100.0% 61.3%
3681017 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 48.0 5.06e-01 87.5% 100.0%
3723251 375.10.1.1 few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol 0.65 55.0 4.90e-01 95.8% 84.3%
3225801 376.1.1.27 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.65 52.0 3.80e-01 100.0% 30.7%
3882753 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.64 55.0 4.00e-01 100.0% 35.6%
4991294 375.1.1.58 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB 0.63 49.0 4.91e-01 91.7% 96.0%
4947644 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 52.0 4.94e-01 97.9% 78.3%
3645896 327.11.2.11 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1_3 0.62 44.0 3.55e-01 95.8% 37.0%
4942277 4261.1.1.0 a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like 0.62 43.0 3.80e-01 91.7% 48.0%
5056818 4261.1.1.0 a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like 0.59 41.0 3.76e-01 91.7% 52.9%
3740918 11.1.1.646 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRP_N 0.59 49.0 3.60e-01 97.9% 57.1%
3805637 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.58 44.0 3.89e-01 95.8% 53.8%
3489384 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 44.0 2.94e-01 89.6% 19.1%
3706431 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.58 44.0 3.55e-01 87.5% 89.4%
4270851 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.57 42.0 3.46e-01 87.5% 99.1%
4568780 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.56 44.0 4.26e-01 89.6% 98.2%
4019747 376.1.1.125 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2, zf-RING_UBOX 0.56 41.0 3.53e-01 87.5% 47.8%
4946681 2003.1.5.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.55 44.0 2.74e-01 100.0% 21.9%
5028394 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 43.0 3.44e-01 97.9% 73.9%
3801700 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 41.0 2.68e-01 95.8% 21.7%
4974381 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 40.0 2.60e-01 95.8% 17.1%
4424001 101.1.9.83 alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM 0.52 41.0 3.26e-01 97.9% 48.3%
3815359 207.1.1.238 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3, LRR_13 0.51 36.0 2.26e-01 100.0% 11.0%
3469360 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.51 38.0 3.46e-01 93.8% 78.8%
3601464 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 41.0 2.50e-01 100.0% 56.7%
3991593 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.50 41.0 3.91e-01 97.9% 83.3%
D2 high residues 69-152
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF10544.16 best T5orf172 44.0 3.50e-11 98.8% 98.0%
PF13455.13 MUG113 61.7 1.10e-16 83.3% 97.3%