Back to structures

OQ859055.1__WNO48330.1__8C_0039__00039

Bact-Vir

OQ859055.1__WNO48330.1__8C_0039__00039

Identity

Accession:
OQ859055 ↗
Kingdom:
phage

Quality

86.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 41-112
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 55.0 5.56e-01 88.9% 74.3%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 58.0 5.36e-01 95.8% 64.0%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.19e-01 95.8% 65.5%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.27e-01 90.3% 78.3%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.41e-01 100.0% 69.6%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 5.24e-01 100.0% 69.0%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 48.0 5.07e-01 90.3% 78.1%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.39e-01 100.0% 70.0%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 4.47e-01 100.0% 44.5%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.34e-01 100.0% 66.0%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.37e-01 100.0% 76.2%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 5.10e-01 100.0% 60.0%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 5.27e-01 100.0% 66.0%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 4.73e-01 100.0% 49.7%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 57.0 4.70e-01 100.0% 58.1%
3htuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 46.0 4.55e-01 90.3% 73.3%
1xb4B01 1.10.10.570 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" 0.62 50.0 4.38e-01 91.7% 59.6%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 55.0 4.62e-01 100.0% 61.7%
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.61 54.0 4.03e-01 100.0% 45.0%
1xb4B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 4.47e-01 90.3% 76.0%
1vhsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 43.0 3.40e-01 83.3% 69.7%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.57 39.0 3.11e-01 72.2% 79.9%
3g8wB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 43.0 3.37e-01 83.3% 70.1%
2vi7A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 42.0 3.33e-01 81.9% 84.0%
2ob0C01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 42.0 3.37e-01 83.3% 70.4%
2i79D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 43.0 3.37e-01 84.7% 69.5%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.56 46.0 4.26e-01 100.0% 71.0%
5z9iA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.56 44.0 2.86e-01 90.3% 71.5%
6mfcA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 42.0 3.18e-01 83.3% 78.5%
2cntA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 42.0 3.42e-01 84.7% 70.9%
4h89A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 42.0 3.28e-01 83.3% 71.4%
3w7bA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 42.0 3.98e-01 100.0% 69.3%
2reeA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 41.0 3.11e-01 83.3% 78.9%
3pp9B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 41.0 3.21e-01 83.3% 65.5%
3shpA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 41.0 3.26e-01 84.7% 65.9%
3dr6B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 40.0 3.20e-01 83.3% 68.0%
2qmwA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 40.0 4.03e-01 100.0% 79.2%
3owcB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 40.0 3.20e-01 83.3% 67.6%
3hp7A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 41.0 3.05e-01 84.7% 85.2%
2fiaB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 39.0 3.17e-01 83.3% 67.9%
3luyA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 39.0 3.77e-01 100.0% 69.7%
4jxqA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 41.0 3.23e-01 93.1% 72.8%
1mwqA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.52 44.0 4.05e-01 100.0% 72.0%
5fiiB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 38.0 3.79e-01 100.0% 76.9%
8a9xA01 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.51 37.0 3.67e-01 90.3% 74.7%
2nraC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.71e-01 91.7% 88.2%
2rilA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 42.0 3.94e-01 100.0% 72.6%
1a7gE00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 39.0 3.86e-01 100.0% 78.0%
3dluA00 3.30.56.30 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit 0.51 42.0 3.98e-01 100.0% 77.9%
1y7pB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 38.0 3.76e-01 100.0% 77.5%
1wi8A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 36.0 3.61e-01 100.0% 74.4%
2qycA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 44.0 3.94e-01 100.0% 73.5%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4556736 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.75 54.0 5.51e-01 90.3% 78.6%
4994794 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 57.0 5.64e-01 93.1% 80.0%
4934055 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 61.0 5.89e-01 100.0% 83.7%
4995085 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 57.0 5.16e-01 100.0% 65.3%
5074554 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 64.0 4.60e-01 100.0% 72.3%
5035522 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 61.0 5.32e-01 100.0% 64.8%
4999546 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 62.0 5.63e-01 100.0% 73.7%
4941955 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 62.0 5.78e-01 100.0% 80.0%
3250041 101.1.2.525 alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.69 57.0 3.97e-01 93.1% 28.4%
5002609 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 61.0 5.56e-01 100.0% 81.1%
3286725 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 62.0 4.54e-01 100.0% 39.5%
3285723 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 62.0 4.58e-01 100.0% 41.7%
3256135 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 54.0 5.11e-01 93.1% 74.1%
4978855 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 61.0 5.07e-01 100.0% 60.0%
3347816 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.64 54.0 4.60e-01 91.7% 59.1%
5076338 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 57.0 4.22e-01 100.0% 43.2%
4980650 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 55.0 4.89e-01 100.0% 66.7%
3592443 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 56.0 4.32e-01 100.0% 66.5%
3637726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 4.40e-01 90.3% 74.5%
3662349 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.61 55.0 4.62e-01 100.0% 66.7%
3341373 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.60 51.0 4.67e-01 97.2% 70.5%
3737548 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.59 43.0 3.85e-01 100.0% 52.8%
3740284 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 43.0 4.11e-01 100.0% 68.2%
3209919 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.57 48.0 4.36e-01 95.8% 73.0%
4944928 213.1.1.25 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.57 42.0 3.26e-01 83.3% 63.9%
4978762 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 50.0 4.43e-01 100.0% 73.3%
5053330 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 49.0 3.41e-01 98.6% 77.1%
3789211 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.56 40.0 3.72e-01 100.0% 57.0%
4991606 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.56 41.0 4.03e-01 100.0% 72.5%
4971671 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 42.0 3.32e-01 83.3% 68.9%
4030911 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.56 42.0 4.06e-01 100.0% 72.6%
153100 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 42.0 3.28e-01 83.3% 71.4%
3427273 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 41.0 3.08e-01 83.3% 61.0%
4978550 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 41.0 3.26e-01 83.3% 67.9%
3966643 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 41.0 3.18e-01 83.3% 63.9%
4409092 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 39.0 3.77e-01 100.0% 67.1%
1279059 2003.1.5.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ 0.54 41.0 3.04e-01 84.7% 84.0%
3729138 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.54 39.0 3.55e-01 100.0% 55.2%
3290196 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 41.0 3.03e-01 86.1% 81.4%
3590710 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.53 40.0 3.76e-01 100.0% 65.3%
4329557 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.53 39.0 3.72e-01 100.0% 66.7%
5025196 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.53 39.0 3.83e-01 100.0% 73.8%
5032610 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.53 41.0 3.11e-01 88.9% 85.9%
4950495 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.52 39.0 3.89e-01 100.0% 77.5%
4112011 310.3.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM 0.52 38.0 3.63e-01 90.3% 64.4%
1786499 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.52 39.0 3.41e-01 100.0% 48.8%
4234397 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.52 39.0 3.57e-01 100.0% 59.0%
4976864 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.52 39.0 3.11e-01 81.9% 89.4%
3800972 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.52 34.0 3.76e-01 80.6% 98.0%
5058881 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 38.0 2.54e-01 100.0% 17.4%
4936933 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.51 39.0 3.78e-01 100.0% 74.1%
3250928 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 38.0 3.78e-01 100.0% 77.5%
3386856 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.51 37.0 3.61e-01 100.0% 70.6%
5071207 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.50 42.0 3.92e-01 100.0% 75.5%
3385456 304.44.1.0 a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 0.50 40.0 3.84e-01 100.0% 77.6%
4987588 304.8.1.82 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 0.50 37.0 3.50e-01 100.0% 63.2%