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OQ863044.1__WOZ56192.1__BtpYZU02_32__00032
Bact-VirOQ863044.1__WOZ56192.1__BtpYZU02_32__00032
Identity
- Accession:
- OQ863044 ↗
- Kingdom:
- phage
Quality
76.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-167
Domain cluster:
rep: AB044554.1__BAA97847.1__X__00040__D16-168
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04860.18 best | Phage_portal | 86.8 | 2.10e-24 | 82.0% | 39.9% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kdrA02 | 3.40.140.120 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › | 0.81 | 48.0 | 5.33e-01 | 71.2% | 73.2% |
| 2lojA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.66 | 17.0 | 3.34e-01 | 80.1% | 87.2% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.65 | 18.0 | 3.19e-01 | 86.5% | 73.9% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 25.0 | 3.70e-01 | 82.7% | 78.6% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 23.0 | 3.54e-01 | 91.0% | 87.5% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 25.0 | 3.83e-01 | 83.3% | 100.0% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.60 | 27.0 | 3.89e-01 | 89.7% | 100.0% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.59 | 23.0 | 3.12e-01 | 85.9% | 67.5% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 26.0 | 3.79e-01 | 91.0% | 95.5% |
| 1vwxM01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 24.0 | 3.07e-01 | 84.0% | 62.4% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 26.0 | 3.76e-01 | 80.1% | 92.9% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 26.0 | 3.75e-01 | 91.0% | 98.4% |
| 1y0mA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 25.0 | 3.70e-01 | 82.7% | 100.0% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 24.0 | 3.64e-01 | 92.9% | 100.0% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 25.0 | 3.66e-01 | 89.7% | 97.0% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 24.0 | 3.60e-01 | 92.3% | 96.8% |
| 1s1nA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 23.0 | 3.47e-01 | 89.7% | 96.7% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 27.0 | 2.88e-01 | 84.6% | 52.3% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 28.0 | 3.45e-01 | 91.0% | 82.2% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 19.0 | 3.18e-01 | 84.6% | 92.9% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 21.0 | 3.10e-01 | 80.8% | 88.1% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942943 | 4056.1.1.1 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 | 0.75 | 67.0 | 5.64e-01 | 95.5% | 96.9% |
| 3478898 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 27.0 | 3.98e-01 | 84.6% | 84.6% |
| 4025829 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 25.0 | 4.07e-01 | 82.7% | 94.5% |
| 5022848 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 24.0 | 3.71e-01 | 80.8% | 86.7% |
| 4888987 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.63 | 24.0 | 3.51e-01 | 82.1% | 76.8% |
| 3605879 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.63 | 21.0 | 3.63e-01 | 87.8% | 97.8% |
| 4505316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 25.0 | 3.87e-01 | 82.1% | 95.0% |
| 3523979 | 604.12.1.118 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF4537 | 0.62 | 22.0 | 3.52e-01 | 91.0% | 83.3% |
| 3631298 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 26.0 | 3.61e-01 | 91.0% | 84.0% |
| 3513923 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 26.0 | 3.66e-01 | 93.6% | 86.7% |
| 3924338 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 24.0 | 3.43e-01 | 82.7% | 82.9% |
| 3529708 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 26.0 | 3.62e-01 | 98.1% | 86.7% |
| 3554995 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 25.0 | 3.55e-01 | 82.7% | 87.1% |
| 3498145 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 25.0 | 3.71e-01 | 82.7% | 96.9% |
| 3435006 | 4.1.1.308 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31073 | 0.57 | 25.0 | 3.60e-01 | 82.7% | 92.3% |
| 3702915 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.57 | 24.0 | 3.59e-01 | 82.7% | 96.7% |
| 3900733 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.57 | 27.0 | 3.90e-01 | 96.8% | 100.0% |
| 2675820 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.57 | 24.0 | 2.96e-01 | 84.0% | 60.4% |
| 4132516 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.57 | 25.0 | 3.38e-01 | 83.3% | 77.5% |
| 3372822 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 24.0 | 3.38e-01 | 83.3% | 80.0% |
| 3636812 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.57 | 25.0 | 3.58e-01 | 82.7% | 93.8% |
| 3500084 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 27.0 | 3.81e-01 | 91.0% | 98.6% |
| 2538670 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.56 | 20.0 | 3.36e-01 | 85.9% | 92.6% |
| 3579728 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.56 | 26.0 | 3.71e-01 | 98.1% | 95.7% |
| 3899828 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.56 | 25.0 | 3.36e-01 | 92.9% | 78.8% |
| 4208181 | 4.1.1.70 ↗ | beta barrels › SH3 › SH3 › SH3 › Tsr0524-like | 0.56 | 25.0 | 3.70e-01 | 84.0% | 98.5% |
| 3415045 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.56 | 24.0 | 3.41e-01 | 83.3% | 85.7% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.56 | 25.0 | 3.55e-01 | 92.9% | 95.4% |
| 3211367 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.55 | 26.0 | 3.27e-01 | 84.6% | 73.3% |
| 3995675 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.55 | 24.0 | 3.55e-01 | 82.1% | 100.0% |
| 3554293 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.55 | 25.0 | 3.65e-01 | 89.7% | 100.0% |
| 3898952 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.55 | 25.0 | 3.38e-01 | 84.0% | 84.0% |
| 3761318 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.55 | 25.0 | 3.40e-01 | 84.0% | 88.6% |
| 157818 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.55 | 28.0 | 3.49e-01 | 100.0% | 81.3% |
| 3788021 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 27.0 | 3.73e-01 | 94.2% | 97.3% |
| 3521739 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.54 | 24.0 | 3.14e-01 | 91.0% | 72.9% |
| 3907870 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 25.0 | 3.35e-01 | 92.9% | 82.3% |
| 4969983 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 20.0 | 2.62e-01 | 89.1% | 58.8% |
| 4159881 | 220.1.1.197 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 | 0.52 | 31.0 | 3.91e-01 | 89.7% | 98.9% |
D2
medium
residues 169-267
Domain cluster:
rep: OK349510.1__UJJ74872.1__X__00221__D5-114
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04860.18 best | Phage_portal | 52.0 | 8.50e-14 | 100.0% | 30.5% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1krlB00 | 6.10.140.2000 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 22.0 | 3.21e-01 | 94.9% | 70.8% |
| 6fh1B01 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.54 | 43.0 | 3.31e-01 | 86.9% | 97.0% |
| 3zqmA00 | 6.10.140.2160 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 30.0 | 3.67e-01 | 86.9% | 89.8% |
| 4z9mB02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.53 | 42.0 | 3.37e-01 | 85.9% | 98.0% |
| 1ab8A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.52 | 39.0 | 3.30e-01 | 81.8% | 68.9% |
| 3x29A00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.51 | 45.0 | 3.80e-01 | 100.0% | 57.8% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032886 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.94 | 90.0 | 6.33e-01 | 100.0% | 37.4% |
| 4424174 | 4038.1.1.0 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein | 0.69 | 63.0 | 4.44e-01 | 100.0% | 39.0% |
| 3943006 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.69 | 61.0 | 4.37e-01 | 100.0% | 33.4% |
| 3590909 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.66 | 56.0 | 4.16e-01 | 100.0% | 35.2% |
| 357071 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.63 | 23.0 | 2.39e-01 | 91.9% | 31.2% |
| 4031453 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.62 | 52.0 | 3.93e-01 | 100.0% | 36.1% |
| 4410228 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.61 | 54.0 | 3.98e-01 | 100.0% | 62.5% |
| 5039294 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.58 | 51.0 | 3.75e-01 | 100.0% | 61.8% |
| 3599364 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 38.0 | 2.65e-01 | 73.7% | 63.2% |