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OQ864999.1__WJZ70260.1__F341_160__00160
Bact-VirOQ864999.1__WJZ70260.1__F341_160__00160
Identity
- Accession:
- OQ864999 ↗
- Kingdom:
- phage
Quality
82.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Fletchervirus›
Campylobacter_phage_F341
TaxID: 3056222
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 184-334
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00388__D99-198_300-332
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.86 | 82.0 | 7.83e-01 | 100.0% | 95.9% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.85 | 82.0 | 7.82e-01 | 100.0% | 98.8% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.85 | 73.0 | 7.63e-01 | 100.0% | 97.1% |
| 1dq3A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.84 | 80.0 | 7.50e-01 | 100.0% | 99.4% |
| 1mi8A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.83 | 72.0 | 7.51e-01 | 100.0% | 95.7% |
| 1am2A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.83 | 80.0 | 7.46e-01 | 100.0% | 98.3% |
| 6vgwA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.83 | 73.0 | 7.55e-01 | 100.0% | 97.2% |
| 2lcjA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.83 | 79.0 | 7.30e-01 | 100.0% | 98.9% |
| 2cw8A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.82 | 78.0 | 7.46e-01 | 100.0% | 99.4% |
| 2imzA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.81 | 73.0 | 7.61e-01 | 100.0% | 100.0% |
| 2jmzA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.80 | 76.0 | 7.30e-01 | 100.0% | 98.8% |
| 5o9iA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.80 | 76.0 | 7.22e-01 | 100.0% | 98.8% |
| 1at0A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.79 | 71.0 | 7.28e-01 | 100.0% | 97.2% |
| 1zdeA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.77 | 72.0 | 7.09e-01 | 100.0% | 91.9% |
| 6zgqA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.73 | 68.0 | 6.91e-01 | 100.0% | 100.0% |
| 1dfaA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.73 | 69.0 | 6.20e-01 | 100.0% | 99.5% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.56 | 28.0 | 3.48e-01 | 94.0% | 76.1% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 23.0 | 3.12e-01 | 97.4% | 81.8% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4994372 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 70.0 | 7.89e-01 | 99.3% | 100.0% |
| 4993732 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 69.0 | 7.53e-01 | 100.0% | 95.2% |
| 5014852 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 77.0 | 7.88e-01 | 100.0% | 95.2% |
| 2553113 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 69.0 | 7.50e-01 | 100.0% | 96.9% |
| 4392318 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.87 | 83.0 | 7.67e-01 | 100.0% | 99.5% |
| 3282306 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 74.0 | 7.86e-01 | 100.0% | 98.5% |
| 4983616 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 82.0 | 7.84e-01 | 100.0% | 98.2% |
| 4457379 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 73.0 | 7.51e-01 | 100.0% | 91.7% |
| 3952464 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.86 | 74.0 | 7.56e-01 | 100.0% | 92.4% |
| 5022295 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 82.0 | 7.90e-01 | 100.0% | 97.0% |
| 5028312 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 73.0 | 7.58e-01 | 100.0% | 95.7% |
| 3949431 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 80.0 | 8.05e-01 | 100.0% | 98.7% |
| 4039971 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 81.0 | 7.65e-01 | 100.0% | 97.1% |
| 4940451 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 73.0 | 7.69e-01 | 99.3% | 99.3% |
| 3604383 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 81.0 | 7.02e-01 | 100.0% | 98.1% |
| 4982797 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 75.0 | 7.74e-01 | 100.0% | 96.6% |
| 5024341 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 81.0 | 7.45e-01 | 100.0% | 96.2% |
| 4060462 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 80.0 | 6.35e-01 | 100.0% | 96.1% |
| 4943231 | 69.1.1.16 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › ATP-synt_ab | 0.84 | 80.0 | 7.49e-01 | 100.0% | 96.7% |
| 4629526 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 80.0 | 6.13e-01 | 100.0% | 99.4% |
| 4979524 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 80.0 | 6.57e-01 | 100.0% | 98.0% |
| 4170121 | 69.1.1.11 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT, Intein_splicing | 0.84 | 80.0 | 7.64e-01 | 100.0% | 98.2% |
| 5023539 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 80.0 | 7.96e-01 | 100.0% | 100.0% |
| 5012957 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 80.0 | 7.55e-01 | 100.0% | 97.7% |
| 5028788 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 73.0 | 7.59e-01 | 100.0% | 97.1% |
| 5014854 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 80.0 | 6.94e-01 | 100.0% | 96.7% |
| 3603108 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 74.0 | 7.62e-01 | 100.0% | 95.9% |
| 4978263 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 80.0 | 7.72e-01 | 100.0% | 95.8% |
| 4993853 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 80.0 | 7.72e-01 | 100.0% | 99.4% |
| 4983458 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 80.0 | 7.73e-01 | 100.0% | 98.8% |
| 5029540 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 79.0 | 7.78e-01 | 100.0% | 98.8% |
| 4084747 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.83 | 80.0 | 6.02e-01 | 100.0% | 99.4% |
| 4992651 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 79.0 | 7.68e-01 | 100.0% | 95.8% |
| 4979631 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 78.0 | 7.90e-01 | 100.0% | 98.7% |
| 4930925 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 72.0 | 7.52e-01 | 100.0% | 97.1% |
| 4975503 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 79.0 | 7.40e-01 | 100.0% | 98.9% |
| 4335483 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 79.0 | 6.76e-01 | 100.0% | 99.1% |
| 182766 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 79.0 | 7.30e-01 | 100.0% | 98.9% |
| 5030213 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 73.0 | 7.40e-01 | 100.0% | 92.0% |
| 5078549 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 79.0 | 7.75e-01 | 100.0% | 96.2% |
| 4971400 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 79.0 | 6.15e-01 | 100.0% | 52.2% |
| 4544734 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 79.0 | 6.94e-01 | 100.0% | 99.0% |
| 3604113 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 74.0 | 7.63e-01 | 100.0% | 97.9% |
| 4993813 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 79.0 | 7.71e-01 | 100.0% | 97.5% |
| 4998392 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 79.0 | 7.68e-01 | 100.0% | 98.2% |
| 4993808 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 74.0 | 7.64e-01 | 99.3% | 97.9% |
| 5052154 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 79.0 | 7.61e-01 | 100.0% | 98.2% |
| 5013038 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 78.0 | 7.70e-01 | 100.0% | 97.5% |
| 2445477 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.82 | 72.0 | 7.19e-01 | 100.0% | 89.0% |
| 4388671 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 78.0 | 7.29e-01 | 100.0% | 98.9% |
| 2524072 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.82 | 78.0 | 7.49e-01 | 100.0% | 97.6% |
| 5066163 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 72.0 | 7.51e-01 | 100.0% | 98.6% |
| 4948019 | 69.1.1.17 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM | 0.82 | 78.0 | 7.39e-01 | 100.0% | 96.0% |
| 4975578 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 78.0 | 6.21e-01 | 100.0% | 56.4% |
| 4054994 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 78.0 | 7.46e-01 | 100.0% | 95.3% |
| 4984220 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 77.0 | 7.69e-01 | 99.3% | 99.4% |
| 4642797 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.81 | 77.0 | 7.39e-01 | 100.0% | 98.2% |
| 5066389 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.81 | 77.0 | 7.08e-01 | 100.0% | 97.4% |
| 5046393 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.81 | 75.0 | 7.57e-01 | 100.0% | 97.3% |
| 4944478 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.81 | 57.0 | 6.38e-01 | 71.5% | 100.0% |
| 3603291 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.81 | 76.0 | 7.22e-01 | 100.0% | 94.9% |
| 5028299 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.80 | 76.0 | 7.59e-01 | 100.0% | 98.1% |
| 3934143 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.80 | 71.0 | 7.36e-01 | 100.0% | 98.6% |
| 3604439 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.80 | 76.0 | 7.29e-01 | 100.0% | 96.5% |
| 164902 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.80 | 76.0 | 7.10e-01 | 100.0% | 92.2% |
| 5031914 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.80 | 76.0 | 7.03e-01 | 100.0% | 93.5% |
| 5031634 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.80 | 76.0 | 7.49e-01 | 100.0% | 93.8% |
| 4993480 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.80 | 76.0 | 7.45e-01 | 100.0% | 98.1% |
| 4070999 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.80 | 71.0 | 7.12e-01 | 100.0% | 91.0% |
| 4600944 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.80 | 71.0 | 6.75e-01 | 100.0% | 80.6% |
| 4487998 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.80 | 71.0 | 6.75e-01 | 100.0% | 80.6% |
| 4993454 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.80 | 75.0 | 6.37e-01 | 100.0% | 96.6% |
| 4971412 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.79 | 74.0 | 6.96e-01 | 98.7% | 100.0% |
| 4999902 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.79 | 72.0 | 7.42e-01 | 100.0% | 98.6% |
| 4243055 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.79 | 71.0 | 6.41e-01 | 100.0% | 72.3% |
| 5029355 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.79 | 74.0 | 7.49e-01 | 100.0% | 99.3% |
| 4342207 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.79 | 74.0 | 7.42e-01 | 100.0% | 98.0% |
| 4943244 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.79 | 74.0 | 7.09e-01 | 100.0% | 99.4% |
| 3518586 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.78 | 71.0 | 6.31e-01 | 100.0% | 69.8% |
| 4291841 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.78 | 74.0 | 7.22e-01 | 100.0% | 100.0% |
| 4993128 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.78 | 75.0 | 7.38e-01 | 100.0% | 96.2% |
| 2546507 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.78 | 70.0 | 7.17e-01 | 100.0% | 98.6% |
| 4932851 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.78 | 64.0 | 6.72e-01 | 100.0% | 94.8% |
| 4977673 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.78 | 74.0 | 6.35e-01 | 100.0% | 98.7% |
| 4946209 | 69.1.1.18 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › DNA_topoisoIV | 0.77 | 75.0 | 6.58e-01 | 100.0% | 99.0% |
| 4997604 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.77 | 73.0 | 6.97e-01 | 100.0% | 95.3% |
| 5029854 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.77 | 72.0 | 6.39e-01 | 100.0% | 96.2% |
| 4930433 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.77 | 73.0 | 7.30e-01 | 100.0% | 97.4% |
| 4993437 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.77 | 69.0 | 7.13e-01 | 94.7% | 97.9% |
| 5012699 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.77 | 73.0 | 7.02e-01 | 100.0% | 99.4% |
| 5065032 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.76 | 73.0 | 7.09e-01 | 100.0% | 98.8% |
| 4127166 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.76 | 72.0 | 7.26e-01 | 100.0% | 98.7% |
| 4993927 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.76 | 70.0 | 7.06e-01 | 96.0% | 100.0% |
| 3511246 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.76 | 67.0 | 6.50e-01 | 96.7% | 84.8% |
| 4996523 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.75 | 72.0 | 6.45e-01 | 100.0% | 97.5% |
| 2323756 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.75 | 72.0 | 7.08e-01 | 100.0% | 99.4% |
| 3936057 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.75 | 71.0 | 7.07e-01 | 100.0% | 97.4% |
| 3230518 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.73 | 69.0 | 6.88e-01 | 100.0% | 96.8% |
| 4940699 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.70 | 67.0 | 6.63e-01 | 100.0% | 98.1% |
D2
medium
residues 13-181_368-447
Domain cluster:
rep: rr1__YP_009552690__Operophtera_brumata_nucleopolyhedrovirus__1046267__D445-618_684-706
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 139.0 | 2.80e-40 | 69.1% | 31.7% |
| PF02867.21 | Ribonuc_red_lgC | 46.0 | 4.50e-12 | 30.9% | 12.4% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r1rA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.91 | 89.0 | 6.70e-01 | 100.0% | 51.7% |
| 2wghA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.88 | 86.0 | 6.07e-01 | 100.0% | 44.1% |
| 1peqA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.88 | 85.0 | 6.60e-01 | 100.0% | 63.0% |
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.86 | 84.0 | 6.00e-01 | 100.0% | 77.7% |
| 6aeoB01 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.62 | 28.0 | 3.70e-01 | 83.9% | 75.6% |
| 3lyeA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.62 | 37.0 | 3.60e-01 | 99.6% | 51.2% |
| 7s2iA01 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.58 | 40.0 | 3.98e-01 | 99.2% | 66.4% |
| 3b0pA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 33.0 | 3.42e-01 | 99.2% | 58.6% |
| 1t7lA02 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.56 | 45.0 | 3.98e-01 | 98.8% | 58.3% |
| 2j62A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 38.0 | 3.49e-01 | 99.2% | 54.4% |
| 4i1sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 25.0 | 3.44e-01 | 89.2% | 87.9% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.53 | 31.0 | 3.91e-01 | 97.6% | 96.5% |
| 4wfsA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 34.0 | 3.56e-01 | 100.0% | 70.7% |
| 4r27B00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 48.0 | 4.02e-01 | 100.0% | 69.5% |
| 6n2aB02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.50 | 35.0 | 3.61e-01 | 98.4% | 73.8% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963206 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.94 | 92.0 | 6.83e-01 | 100.0% | 53.6% |
| 3942765 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.94 | 92.0 | 6.86e-01 | 100.0% | 54.5% |
| 4145444 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.94 | 92.0 | 6.88e-01 | 100.0% | 55.0% |
| 4298539 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 88.0 | 6.53e-01 | 100.0% | 55.3% |
| 4990406 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 87.0 | 6.32e-01 | 100.0% | 60.8% |
| 3590466 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.89 | 86.0 | 6.40e-01 | 100.0% | 57.2% |
| 4067125 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.88 | 86.0 | 6.53e-01 | 100.0% | 55.1% |
| 5058546 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.88 | 86.0 | 6.15e-01 | 100.0% | 92.3% |
| 3500621 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.88 | 86.0 | 6.47e-01 | 100.0% | 51.0% |
| 3823652 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.88 | 86.0 | 6.30e-01 | 100.0% | 57.5% |
| 4015532 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.88 | 86.0 | 6.26e-01 | 100.0% | 53.4% |
| 4190659 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.88 | 85.0 | 5.94e-01 | 100.0% | 95.7% |
| 996122 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.87 | 85.0 | 6.20e-01 | 100.0% | 53.4% |
| 2504767 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.87 | 85.0 | 6.41e-01 | 99.2% | 56.9% |
| 4994375 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.87 | 85.0 | 6.44e-01 | 99.6% | 61.4% |
| 4934525 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.87 | 85.0 | 6.29e-01 | 100.0% | 90.5% |
| 4564490 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.87 | 84.0 | 6.22e-01 | 100.0% | 92.3% |
| 5030208 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.87 | 84.0 | 6.04e-01 | 100.0% | 88.3% |
| 4822330 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.86 | 83.0 | 6.51e-01 | 99.2% | 64.6% |
| 3972491 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.84 | 81.0 | 5.95e-01 | 100.0% | 95.1% |
| 4937370 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.83 | 81.0 | 5.82e-01 | 100.0% | 97.9% |
| 5040104 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.83 | 81.0 | 6.14e-01 | 100.0% | 92.2% |
| 4963031 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.81 | 79.0 | 5.67e-01 | 100.0% | 92.7% |
| 4985374 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.80 | 78.0 | 5.65e-01 | 100.0% | 80.7% |
| 4993733 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.79 | 77.0 | 5.72e-01 | 100.0% | 82.9% |
| 2472944 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.76 | 74.0 | 5.89e-01 | 100.0% | 59.2% |
| 4931388 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.62 | 25.0 | 3.24e-01 | 82.3% | 61.3% |
| 4985461 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.54 | 39.0 | 3.71e-01 | 100.0% | 61.0% |
| 1556921 | 2002.1.1.12 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_1 | 0.51 | 48.0 | 3.99e-01 | 100.0% | 67.9% |