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OQ884028.1__WNO29645.1__X__00029

Bact-Vir

OQ884028.1__WNO29645.1__X__00029

Identity

Accession:
OQ884028 ↗
Kingdom:
phage

Quality

74.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Koutsourovirus› Enterobacter_phage_SDFMU_Pec

TaxID: 3076136

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-43
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b8pA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.77 67.0 4.32e-01 100.0% 94.8%
7mdhA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.75 65.0 4.21e-01 100.0% 79.2%
5lqdD01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.73 64.0 3.87e-01 100.0% 19.2%
3efzB00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.69 57.0 3.59e-01 100.0% 23.1%
1e8yA03 1.25.40.70 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) 0.68 54.0 3.48e-01 92.1% 33.3%
1r4gA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.67 50.0 4.49e-01 94.7% 58.5%
2l37A00 6.10.250.890 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 53.0 5.10e-01 92.1% 76.7%
2jroA01 3.30.1910.10 Alpha Beta › 2-Layer Sandwich › so0334 like fold › so0334 like domain 0.66 55.0 4.63e-01 94.7% 92.3%
4lctB00 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 57.0 3.31e-01 94.7% 44.0%
3ce9A02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.66 56.0 3.54e-01 100.0% 19.1%
3gg6A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.66 57.0 3.88e-01 100.0% 91.7%
4qpkB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.64 50.0 3.50e-01 89.5% 27.6%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.64 53.0 3.87e-01 100.0% 93.2%
1rq0A01 6.10.140.160 Special › Helix non-globular › Helix Hairpins › 0.64 56.0 4.34e-01 100.0% 56.6%
2ipcA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.63 52.0 3.25e-01 100.0% 16.9%
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.61 53.0 4.87e-01 100.0% 76.5%
3ko2A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.61 48.0 3.22e-01 89.5% 21.7%
7ce1A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 45.0 4.13e-01 84.2% 78.8%
4bzaA03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.59 44.0 3.55e-01 78.9% 67.1%
3mnfA00 3.40.50.10900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit 0.58 49.0 3.07e-01 100.0% 89.4%
1suiA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 47.0 3.03e-01 100.0% 73.6%
1nrkA03 2.40.30.160 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 37.0 2.78e-01 86.8% 23.8%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3634661 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.79 66.0 5.02e-01 92.1% 44.7%
3538928 4.1.1.358 ↗ beta barrels › SH3 › SH3 › SH3 › PLU-1 0.72 62.0 4.24e-01 100.0% 29.3%
3788111 3092.1.1.1 ↗ alpha arrays › yeast protein YOR252W › yeast protein YOR252W › yeast protein YOR252W › Tma16 0.70 60.0 3.87e-01 100.0% 40.0%
3730435 630.1.1.0 ↗ a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain 0.70 63.0 4.08e-01 100.0% 91.9%
2390431 4166.1.1.1 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › T6SS_VasE 0.68 54.0 3.53e-01 100.0% 18.8%
4816090 6.1.1.15 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ins145_P3_rec 0.66 58.0 3.55e-01 100.0% 18.1%
3336457 568.1.1.0 ↗ few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related 0.62 49.0 4.88e-01 89.5% 92.5%
3598026 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.62 53.0 3.50e-01 97.4% 71.9%
5060981 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.62 52.0 4.58e-01 100.0% 65.5%
3732446 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.60 49.0 4.71e-01 92.1% 97.8%
D2 medium residues 51-82
PDB
D3 medium residues 99-134
PDB
Domain cluster: rep: MF158037.1__ATE85597.1__St162_gp12__00012__D42-74