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OQ884030.1__WNO29736.1__X__00004
Bact-VirOQ884030.1__WNO29736.1__X__00004
Identity
- Accession:
- OQ884030 ↗
- Kingdom:
- phage
Quality
86.4
mean pLDDT
Taxonomy
TaxID: 3076135
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-76
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bxhA06 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.69 | 52.0 | 5.38e-01 | 84.5% | 85.1% |
| 3mnlB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 61.0 | 4.54e-01 | 100.0% | 54.4% |
| 2of7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 54.0 | 4.43e-01 | 100.0% | 76.4% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.62 | 47.0 | 3.76e-01 | 80.3% | 100.0% |
| 4dtdA02 | 1.10.3680.20 | Mainly Alpha › Orthogonal Bundle › TerB-like › Actin cross-linking domain | 0.61 | 51.0 | 4.27e-01 | 100.0% | 75.2% |
| 2jo7A00 | 1.10.4170.10 | Mainly Alpha › Orthogonal Bundle › Glycosylphosphatidylinositol-anchored merozoite surface protein › Glycosylphosphatidylinositol-anchored merozoite surface protein | 0.60 | 53.0 | 3.78e-01 | 100.0% | 69.6% |
| 3vldA02 | 1.25.40.580 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 46.0 | 3.61e-01 | 100.0% | 38.6% |
| 2xrhA00 | 1.20.120.1430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HP0721 helical bundle | 0.59 | 47.0 | 4.31e-01 | 90.1% | 84.0% |
| 4j0eA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 48.0 | 3.56e-01 | 97.2% | 33.2% |
| 1miwA03 | 1.20.58.560 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 42.0 | 3.85e-01 | 100.0% | 57.0% |
| 2kmuA00 | 1.10.10.1460 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 36.0 | 3.92e-01 | 74.6% | 80.4% |
| 1m4rB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 42.0 | 3.45e-01 | 80.3% | 78.7% |
| 3zdrA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.57 | 48.0 | 3.56e-01 | 98.6% | 58.6% |
| 2zs0A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 49.0 | 3.98e-01 | 100.0% | 73.6% |
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 48.0 | 3.93e-01 | 100.0% | 53.5% |
| 2oifB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 47.0 | 3.85e-01 | 100.0% | 70.9% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.55 | 44.0 | 3.68e-01 | 87.3% | 70.4% |
| 2xv9A00 | 1.10.533.30 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Nematode polyprotein allergen ABA-1 | 0.54 | 45.0 | 3.75e-01 | 94.4% | 88.1% |
| 1x9fD00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 47.0 | 3.82e-01 | 100.0% | 54.3% |
| 4lqkA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.54 | 47.0 | 3.88e-01 | 100.0% | 54.5% |
| 1hekA00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.54 | 47.0 | 4.03e-01 | 100.0% | 69.8% |
| 2is6A04 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.52 | 37.0 | 2.94e-01 | 76.1% | 83.9% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.52 | 42.0 | 3.53e-01 | 100.0% | 50.0% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.51 | 38.0 | 3.66e-01 | 81.7% | 82.7% |
| 2if4A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 42.0 | 3.52e-01 | 95.8% | 62.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3227171 | 207.1.1.104 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_Zer-1 | 0.72 | 54.0 | 3.59e-01 | 100.0% | 19.7% |
| 5000618 | 1085.1.1.1 ↗ | few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 › DHH_CID | 0.70 | 50.0 | 4.56e-01 | 76.1% | 82.1% |
| 3839206 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.69 | 51.0 | 4.96e-01 | 80.3% | 70.0% |
| 5068124 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.61 | 41.0 | 3.50e-01 | 70.4% | 79.2% |
| 4200361 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.59 | 53.0 | 4.81e-01 | 100.0% | 95.8% |
| 3986989 | 5054.1.1.68 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › AI-2E_transport | 0.58 | 44.0 | 3.34e-01 | 81.7% | 34.7% |
| 3968853 | 2498.4.1.0 ↗ | mixed a+b and a/b › Zincin-like › HSP90 C-terminal domain (C-terminal part of Pfam 00183) › HSP90 C-terminal domain (C-terminal part of Pfam 00183) | 0.58 | 40.0 | 3.15e-01 | 71.8% | 76.0% |
| 5037459 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.57 | 46.0 | 2.90e-01 | 93.0% | 51.5% |
| 3512410 | 377.1.1.23 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › SIX1_SD | 0.56 | 47.0 | 4.00e-01 | 100.0% | 55.8% |
| 4623762 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.56 | 49.0 | 4.40e-01 | 100.0% | 83.0% |
| 3632454 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.54 | 38.0 | 3.61e-01 | 74.6% | 89.4% |
| 3721580 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.54 | 45.0 | 3.04e-01 | 93.0% | 61.4% |
| 3409020 | 109.4.1.394 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMC1_C | 0.53 | 41.0 | 2.96e-01 | 91.5% | 44.9% |
| 3183105 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.53 | 40.0 | 2.93e-01 | 85.9% | 66.8% |
| 3801607 | 150.1.1.121 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PF29123 | 0.53 | 39.0 | 3.17e-01 | 81.7% | 87.3% |
| 3978907 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.52 | 40.0 | 3.74e-01 | 83.1% | 75.6% |
| 3579763 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.52 | 38.0 | 3.22e-01 | 76.1% | 49.1% |
| 5079320 | 2002.1.1.452 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM_C | 0.52 | 43.0 | 2.94e-01 | 98.6% | 29.8% |