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OQ884030.1__WNO29899.1__X__00167

Bact-Vir

OQ884030.1__WNO29899.1__X__00167

Identity

Accession:
OQ884030 ↗
Kingdom:
phage

Quality

89.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Agatevirus› Bacillus_phage_SDFMU_Pbc

TaxID: 3076135

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-167
PDB
Domain cluster: rep: OQ129426.1__WFG33958.1__F10086_36__00036__D10-175
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 27.0 3.38e-01 85.5% 69.5%
4kcaA03 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.58 36.0 4.44e-01 95.0% 100.0%
4cgyA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.57 31.0 3.43e-01 79.2% 63.3%
1ew3A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 41.0 4.14e-01 99.4% 75.5%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.56 39.0 3.49e-01 96.9% 49.6%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 22.0 3.12e-01 92.5% 75.7%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 39.0 4.01e-01 95.6% 76.1%
2xstA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 38.0 3.99e-01 99.4% 77.9%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 39.0 3.89e-01 99.4% 72.7%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 41.0 4.10e-01 99.4% 76.8%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 38.0 3.96e-01 96.9% 78.1%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 36.0 3.78e-01 94.3% 76.2%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 39.0 3.78e-01 98.1% 68.9%
1c8uA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 30.0 3.44e-01 99.4% 79.1%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4031907 222.1.1.28 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27762 0.75 36.0 4.26e-01 97.5% 65.5%
4559690 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.57 42.0 4.20e-01 98.7% 75.6%
3965912 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.55 27.0 3.41e-01 86.2% 77.9%
4424375 222.1.1.28 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27762 0.55 38.0 4.34e-01 100.0% 94.2%
3854099 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.54 38.0 3.92e-01 98.7% 74.8%
4449665 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 40.0 4.01e-01 99.4% 76.9%
840 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.52 39.0 3.77e-01 98.1% 68.5%
3703112 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 28.0 3.29e-01 86.2% 73.3%
5010189 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.50 30.0 3.27e-01 80.5% 69.1%
D2 high residues 174-283
PDB
Domain cluster: rep: OQ129426.1__WFG33958.1__F10086_36__00036__D184-294
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2n54B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 31.0 3.99e-01 73.6% 68.2%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 48.0 4.84e-01 83.6% 68.8%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.71 53.0 5.46e-01 83.6% 82.7%
2oviA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.70 59.0 5.24e-01 96.4% 63.9%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.64 56.0 4.88e-01 97.3% 65.7%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.64 54.0 4.98e-01 90.9% 73.9%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.64 37.0 4.23e-01 100.0% 80.3%
4dqnA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.60 45.0 3.92e-01 77.3% 87.3%
2jrbA00 3.30.250.20 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain 0.58 33.0 4.05e-01 90.9% 92.3%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.58 35.0 4.25e-01 90.0% 98.5%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.57 34.0 4.27e-01 73.6% 98.5%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.56 41.0 3.65e-01 76.4% 90.0%
2olvA03 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.54 42.0 2.96e-01 80.9% 75.1%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.53 39.0 4.22e-01 100.0% 95.6%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 41.0 3.56e-01 96.4% 53.2%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.52 36.0 3.41e-01 75.5% 60.2%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 35.0 3.87e-01 75.5% 83.3%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.52 39.0 4.06e-01 97.3% 86.3%
2jkdB00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 40.0 3.65e-01 82.7% 97.9%
2x45A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 43.0 4.02e-01 97.3% 75.7%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.50 39.0 3.34e-01 80.9% 78.2%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3750640 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.74 53.0 5.35e-01 73.6% 75.5%
3782222 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 48.0 4.26e-01 84.5% 49.0%
3548416 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.70 53.0 5.18e-01 79.1% 81.7%
4962251 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.69 55.0 5.17e-01 84.5% 68.9%
3705153 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 54.0 5.07e-01 83.6% 74.1%
3967527 4216.1.1.1 ↗ a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS 0.68 61.0 5.26e-01 98.2% 67.5%
5023750 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.68 55.0 5.29e-01 100.0% 76.0%
3402045 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.67 50.0 5.14e-01 80.9% 81.9%
2663669 4216.1.1.2 ↗ a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.66 58.0 5.16e-01 96.4% 70.0%
4945272 220.5.1.2 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_C 0.66 55.0 5.30e-01 100.0% 79.2%
3223154 220.1.1.176 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 0.66 51.0 4.74e-01 83.6% 65.0%
4946228 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 45.0 4.21e-01 78.2% 60.0%
3777215 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 43.0 4.53e-01 83.6% 76.0%
3607882 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 43.0 4.36e-01 83.6% 73.6%
4996048 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 39.0 3.66e-01 73.6% 59.2%
3602276 881.4.1.2 ↗ a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › DUF4367 0.56 34.0 3.21e-01 97.3% 48.9%
4944998 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 38.0 3.66e-01 74.5% 61.6%
5049697 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 38.0 3.66e-01 75.5% 61.6%
3924612 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.55 46.0 4.32e-01 89.1% 81.5%
5038289 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 40.0 3.67e-01 75.5% 60.0%
4945232 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 40.0 3.86e-01 77.3% 68.3%
5024617 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.55 42.0 4.49e-01 100.0% 95.8%
3927907 223.2.1.16 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › LAMTOR5 0.55 36.0 4.07e-01 80.0% 87.1%
3628286 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.54 39.0 3.68e-01 80.9% 62.3%
3738165 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.54 38.0 3.69e-01 80.9% 64.8%
3623001 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.54 37.0 4.24e-01 75.5% 97.5%
3390111 223.2.1.16 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › LAMTOR5 0.54 37.0 4.12e-01 80.9% 86.7%
5051015 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 41.0 3.65e-01 80.9% 57.4%
3494944 220.4.1.0 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins 0.53 37.0 3.63e-01 88.2% 65.8%
3783266 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.53 39.0 3.71e-01 80.0% 66.4%
3484371 220.4.1.0 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins 0.53 36.0 4.00e-01 87.3% 86.7%
4971503 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 38.0 3.65e-01 81.8% 64.8%
3499381 2498.1.1.14 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.52 37.0 2.31e-01 87.3% 13.3%
3283078 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.52 36.0 3.33e-01 71.8% 98.0%
3897681 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 28.0 3.65e-01 76.4% 96.7%
4977657 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 40.0 3.60e-01 80.9% 63.3%
4614038 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.52 41.0 3.90e-01 86.4% 97.7%
3412604 5.1.4.224 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 0.52 34.0 2.40e-01 100.0% 21.0%
4182580 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.52 39.0 3.70e-01 80.0% 66.2%
5051142 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 41.0 3.71e-01 83.6% 62.8%
3227515 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.52 41.0 3.95e-01 86.4% 97.7%
3487159 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.51 37.0 2.59e-01 87.3% 23.8%
3800961 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 40.0 2.57e-01 80.9% 99.6%
3894563 9.1.1.24 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.51 40.0 3.88e-01 86.4% 97.7%
3394732 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.50 36.0 4.04e-01 80.9% 92.2%