←Back to structures
OQ884030.1__WNO29925.1__X__00193
Bact-VirOQ884030.1__WNO29925.1__X__00193
Identity
- Accession:
- OQ884030 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Taxonomy
TaxID: 3076135
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-59
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7qttV01 | 2.40.100.10 | Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like | 0.59 | 50.0 | 3.79e-01 | 100.0% | 100.0% |
| 5ejrA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 37.0 | 3.31e-01 | 100.0% | 41.9% |
| 3b8fB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.59 | 39.0 | 3.02e-01 | 71.4% | 38.0% |
| 2vugA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.58 | 43.0 | 4.08e-01 | 83.9% | 97.2% |
| 1pgjA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.54 | 38.0 | 2.52e-01 | 75.0% | 38.0% |
| 1khiA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 40.0 | 3.74e-01 | 82.1% | 76.4% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.54 | 38.0 | 2.89e-01 | 75.0% | 77.9% |
| 3ll3B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 36.0 | 2.41e-01 | 73.2% | 49.8% |
| 1a80A00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.51 | 36.0 | 2.31e-01 | 75.0% | 18.4% |
| 2nxvA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 41.0 | 2.81e-01 | 94.6% | 63.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3959440 | 4.1.1.180 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3107 | 0.74 | 64.0 | 6.12e-01 | 100.0% | 92.3% |
| 2126757 | 170.2.1.1 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › Gag_p24 | 0.54 | 38.0 | 2.89e-01 | 75.0% | 77.9% |
| 4023426 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 40.0 | 3.77e-01 | 83.9% | 80.0% |
| 4401511 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 40.0 | 2.91e-01 | 83.9% | 90.6% |
| 1873429 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.53 | 36.0 | 2.42e-01 | 73.2% | 49.8% |
| 3518192 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 36.0 | 3.97e-01 | 92.9% | 93.3% |
| 3687458 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.52 | 39.0 | 3.64e-01 | 85.7% | 76.0% |
| 2555623 | 207.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Alpha subunit of glutamate synthase-C › Alpha subunit of glutamate synthase-C | 0.51 | 40.0 | 2.71e-01 | 94.6% | 31.7% |
| 3573644 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.51 | 35.0 | 2.96e-01 | 75.0% | 40.9% |
| 2601483 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.50 | 41.0 | 2.78e-01 | 94.6% | 59.0% |