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OQ884030.1__WNO29931.1__X__00199

Bact-Vir

OQ884030.1__WNO29931.1__X__00199

Identity

Accession:
OQ884030 ↗
Kingdom:
phage

Quality

84.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Agatevirus› Bacillus_phage_SDFMU_Pbc

TaxID: 3076135

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-105
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.54 42.0 3.90e-01 100.0% 64.8%
6rloK01 1.10.1450.10 Mainly Alpha › Orthogonal Bundle › Cd81 Antigen, Extracellular Domain; Chain: A › Tetraspanin 0.54 36.0 4.05e-01 85.1% 86.7%
1g8qA00 1.10.1450.10 Mainly Alpha › Orthogonal Bundle › Cd81 Antigen, Extracellular Domain; Chain: A › Tetraspanin 0.53 38.0 3.96e-01 81.9% 80.0%
1gw5A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 36.0 2.24e-01 72.3% 18.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3193188 386.1.1.256 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF26177 0.50 29.0 3.26e-01 98.9% 75.7%
D2 high residues 109-198
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fhxA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.68 46.0 3.38e-01 88.9% 26.1%
2qdsA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.65 41.0 3.10e-01 87.8% 25.9%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.64 57.0 4.11e-01 100.0% 90.1%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 38.0 3.32e-01 100.0% 37.6%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.63 55.0 4.71e-01 100.0% 81.6%
3dnsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 48.0 4.27e-01 91.1% 57.3%
2joiA00 3.30.310.190 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.60 42.0 4.14e-01 84.4% 68.8%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 4.30e-01 98.9% 77.4%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 44.0 4.36e-01 86.7% 85.9%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 30.0 3.39e-01 86.7% 68.1%
1nkgA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 40.0 2.91e-01 75.6% 42.6%
2mm0A00 2.10.70.110 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.55 37.0 4.09e-01 98.9% 96.9%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 38.0 2.85e-01 74.4% 84.1%
4dsdA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.53 38.0 3.44e-01 75.6% 57.1%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 39.0 4.04e-01 98.9% 81.6%
2elbA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 40.0 3.90e-01 98.9% 71.6%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 33.0 3.46e-01 96.7% 69.1%
2kuqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.64e-01 88.9% 82.4%
4g7nA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.53 47.0 4.63e-01 100.0% 97.9%
5u78C00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 45.0 4.16e-01 98.9% 83.6%
3weoA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.51 40.0 2.95e-01 85.6% 87.2%
1wthA02 3.10.450.190 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 35.0 3.36e-01 70.0% 92.2%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3332613 4.1.1.284 ↗ beta barrels › SH3 › SH3 › SH3 › SBNO 0.64 39.0 3.59e-01 100.0% 46.7%
3705308 9.1.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.63 56.0 5.19e-01 100.0% 93.9%
3976684 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.63 34.0 3.61e-01 81.1% 58.7%
3332764 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.62 42.0 4.34e-01 88.9% 75.3%
3712908 9.1.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.62 53.0 5.05e-01 97.8% 96.3%
5011313 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.61 40.0 3.38e-01 81.1% 40.7%
5054125 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.61 41.0 3.46e-01 82.2% 41.3%
5029671 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.59 40.0 3.30e-01 92.2% 38.7%
3862126 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.57 30.0 3.49e-01 100.0% 71.7%
3660730 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.57 43.0 3.44e-01 95.6% 41.2%
4935086 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.57 42.0 3.47e-01 95.6% 44.5%
4433757 3347.1.1.3 ↗ beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531 0.56 41.0 2.62e-01 77.8% 16.0%
4210618 3735.1.1.12 ↗ beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell 0.56 41.0 2.64e-01 78.9% 16.3%
3649123 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 37.0 2.61e-01 72.2% 42.0%
3592181 220.1.1.74 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.54 44.0 3.82e-01 87.8% 84.4%
119300 3153.1.1.1 ↗ a+b two layers › PipX › PipX › PipX › PipX 0.53 34.0 3.47e-01 94.4% 66.7%
3478706 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.52 41.0 3.50e-01 100.0% 52.0%
3465992 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 43.0 3.03e-01 95.6% 68.5%
3833006 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.51 42.0 3.04e-01 95.6% 95.5%
3392352 192.19.1.6 ↗ alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like › eIF2A 0.50 42.0 2.72e-01 93.3% 93.3%
4868007 5.1.2.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › NHL 0.50 40.0 3.03e-01 91.1% 98.0%